RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 HCG22E2RYF7 251 aa13.26□□□□□ -0.29
E2F1-201ENST00000343380 IGKV2-24A0A0C4DH68 120 aa13.25□□□□□ -0.29
E2F1-201ENST00000343380 A0A096LNI7 61 aa13.24□□□□□ -0.29
E2F1-201ENST00000343380 hDV103S1A0JD37 113 aa13.24□□□□□ -0.29
E2F1-201ENST00000343380 BRK1Q8WUW1 75 aa13.24□□□□□ -0.29
E2F1-201ENST00000343380 C1orf64Q8NEQ6 169 aa13.22□□□□□ -0.29
E2F1-201ENST00000343380 A0A087WSZ3 146 aa13.21□□□□□ -0.29
E2F1-201ENST00000343380 PRR4Q16378 134 aa13.21□□□□□ -0.29
E2F1-201ENST00000343380 WFDC13Q8IUB5 93 aa13.21□□□□□ -0.29
E2F1-201ENST00000343380 KRTAP1-5Q9BYS1 174 aa13.2□□□□□ -0.3
E2F1-201ENST00000343380 DNAH9Q9NYC9 4486 aa13.2□□□□□ -0.3
E2F1-201ENST00000343380 RPL37AP61513 92 aaKnown RBP13.19□□□□□ -0.3
E2F1-201ENST00000343380 KRTAP11-1Q8IUC1 163 aa13.18□□□□□ -0.3
E2F1-201ENST00000343380 PKIGQ9Y2B9 76 aa13.16□□□□□ -0.3
E2F1-201ENST00000343380 STAB2Q8WWQ8 2551 aa13.15□□□□□ -0.3
E2F1-201ENST00000343380 C16orf90A8MZG2 172 aa13.14□□□□□ -0.31
E2F1-201ENST00000343380 IGLV8-61A0A075B6I0 122 aa13.13□□□□□ -0.31
E2F1-201ENST00000343380 CHTF8P0CG12 524 aa13.11□□□□□ -0.31
E2F1-201ENST00000343380 TENM2Q9NT68 2774 aa13.11□□□□□ -0.31
E2F1-201ENST00000343380 UBE2AP49459 152 aa13.1□□□□□ -0.31
E2F1-201ENST00000343380 PHF5AQ7RTV0 110 aaKnown RBP13.09□□□□□ -0.31
E2F1-201ENST00000343380 COL7A1Q02388 2944 aa13.09□□□□□ -0.31
E2F1-201ENST00000343380 KRTAP29-1A8MX34 341 aaPredicted RBP13.08□□□□□ -0.32
E2F1-201ENST00000343380 CNBPP62633 177 aaKnown RBP13.06□□□□□ -0.32
E2F1-201ENST00000343380 MGAM2Q2M2H8 2515 aa13.05□□□□□ -0.32
E2F1-201ENST00000343380 K7EIL1 84 aa13.05□□□□□ -0.32
E2F1-201ENST00000343380 LINC00208Q96KT6 92 aa13.05□□□□□ -0.32
E2F1-201ENST00000343380 CYP4F30PQ9H0H9 118 aa13.05□□□□□ -0.32
E2F1-201ENST00000343380 Q1T7F1 81 aa13.03□□□□□ -0.32
E2F1-201ENST00000343380 DNAH7Q8WXX0 4024 aa13.03□□□□□ -0.32
E2F1-201ENST00000343380 TRAV22A0A0B4J277 110 aa13.02□□□□□ -0.32
E2F1-201ENST00000343380 MP68P56378 58 aa13.01□□□□□ -0.33
E2F1-201ENST00000343380 PSPHP1O15172 72 aa13□□□□□ -0.33
E2F1-201ENST00000343380 CASC2Q6XLA1 102 aa13□□□□□ -0.33
E2F1-201ENST00000343380 PRR15Q8IV56 129 aa13□□□□□ -0.33
E2F1-201ENST00000343380 LINC00472Q9H8W2 130 aa12.99□□□□□ -0.33
E2F1-201ENST00000343380 NDUFB1O75438 58 aa12.97□□□□□ -0.33
E2F1-201ENST00000343380 H0Y9P7 68 aa12.96□□□□□ -0.33
E2F1-201ENST00000343380 SPRR1BP22528 89 aa12.96□□□□□ -0.33
E2F1-201ENST00000343380 A8MWP4 228 aa12.95□□□□□ -0.34
E2F1-201ENST00000343380 PANO1I0J062 215 aa12.93□□□□□ -0.34
E2F1-201ENST00000343380 B9D2Q9BPU9 175 aa12.92□□□□□ -0.34
E2F1-201ENST00000343380 H0Y9J4 135 aa12.91□□□□□ -0.34
E2F1-201ENST00000343380 UBE2DNLQ8IWF7 75 aa12.89□□□□□ -0.35
E2F1-201ENST00000343380 C1orf195Q5TG92 126 aa12.88□□□□□ -0.35
E2F1-201ENST00000343380 A8MUN3 132 aa12.88□□□□□ -0.35
E2F1-201ENST00000343380 MDFIQ99750 246 aa12.88□□□□□ -0.35
E2F1-201ENST00000343380 C9orf163Q8N9P6 203 aa12.86□□□□□ -0.35
E2F1-201ENST00000343380 MMP24-AS1A0A0U1RRL7 71 aa12.85□□□□□ -0.35
E2F1-201ENST00000343380 APLNQ9ULZ1 77 aa12.85□□□□□ -0.35
E2F1-201ENST00000343380 PLECQ15149 4684 aaKnown RBP12.84□□□□□ -0.35
E2F1-201ENST00000343380 KRTAP13-1Q8IUC0 172 aa12.83□□□□□ -0.36
E2F1-201ENST00000343380 SPANXA2-OT1Q8N9U9 137 aa12.83□□□□□ -0.36
E2F1-201ENST00000343380 C14orf177Q52M58 125 aa12.82□□□□□ -0.36
E2F1-201ENST00000343380 H3BPC8 53 aa12.81□□□□□ -0.36
E2F1-201ENST00000343380 A8MU10 97 aa12.81□□□□□ -0.36
E2F1-201ENST00000343380 DYNC2H1Q8NCM8 4307 aaKnown RBP12.8□□□□□ -0.36
E2F1-201ENST00000343380 KRTAP21-3Q3LHN1 58 aa12.8□□□□□ -0.36
E2F1-201ENST00000343380 IGLV9-49A0A0B4J1Y8 123 aa12.79□□□□□ -0.36
E2F1-201ENST00000343380 Q96NJ1 140 aa12.79□□□□□ -0.36
E2F1-201ENST00000343380 Q5VV11 94 aa12.78□□□□□ -0.36
E2F1-201ENST00000343380 Q8N9P0 234 aaPredicted RBP12.76□□□□□ -0.37
E2F1-201ENST00000343380 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.74□□□□□ -0.37
E2F1-201ENST00000343380 FRAS1Q86XX4 4008 aa12.72□□□□□ -0.37
E2F1-201ENST00000343380 V9GYY9 64 aa12.71□□□□□ -0.37
E2F1-201ENST00000343380 PCOTHQ58A44 107 aa12.71□□□□□ -0.37
E2F1-201ENST00000343380 Q6ZRN7 208 aaPredicted RBP12.71□□□□□ -0.37
E2F1-201ENST00000343380 MOBPQ13875 183 aa12.7□□□□□ -0.38
E2F1-201ENST00000343380 NBDYA0A0U1RRE5 68 aa12.69□□□□□ -0.38
E2F1-201ENST00000343380 ASB16-AS1Q495Z4 193 aa12.69□□□□□ -0.38
E2F1-201ENST00000343380 COA5Q86WW8 74 aa12.67□□□□□ -0.38
E2F1-201ENST00000343380 IGLV7-46A0A075B6I9 117 aa12.67□□□□□ -0.38
E2F1-201ENST00000343380 CD164Q04900 197 aa12.67□□□□□ -0.38
E2F1-201ENST00000343380 ANAPC11Q9NYG5 84 aa12.66□□□□□ -0.38
E2F1-201ENST00000343380 SPACA4Q8TDM5 124 aa12.65□□□□□ -0.38
E2F1-201ENST00000343380 PRR15LQ9BU68 103 aa12.65□□□□□ -0.38
E2F1-201ENST00000343380 C8orf17Q9NRJ1 99 aa12.65□□□□□ -0.38
E2F1-201ENST00000343380 DNAH8Q96JB1 4490 aa12.65□□□□□ -0.38
E2F1-201ENST00000343380 CHKB-CPT1BH3BT56 60 aa12.63□□□□□ -0.39
E2F1-201ENST00000343380 HECTD4Q9Y4D8 3996 aa12.63□□□□□ -0.39
E2F1-201ENST00000343380 IGHV6-1A0A0B4J1U7 121 aa12.63□□□□□ -0.39
E2F1-201ENST00000343380 LIMD2Q9BT23 127 aa12.62□□□□□ -0.39
E2F1-201ENST00000343380 A0A087X002 238 aa12.61□□□□□ -0.39
E2F1-201ENST00000343380 NOTCH2NLQ7Z3S9 236 aa12.61□□□□□ -0.39
E2F1-201ENST00000343380 LINC00483Q53H64 154 aa12.61□□□□□ -0.39
E2F1-201ENST00000343380 STARD9Q9P2P6 4700 aa12.61□□□□□ -0.39
E2F1-201ENST00000343380 WWC2-AS2Q96NR7 200 aa12.59□□□□□ -0.39
E2F1-201ENST00000343380 NDUFS5O43920 106 aa12.59□□□□□ -0.39
E2F1-201ENST00000343380 Q6ZR54 194 aa12.58□□□□□ -0.4
E2F1-201ENST00000343380 TP53AIP1Q9HCN2 124 aa12.58□□□□□ -0.4
E2F1-201ENST00000343380 A0A1B0GVX0 72 aa12.57□□□□□ -0.4
E2F1-201ENST00000343380 PMAIP1Q13794 54 aa12.56□□□□□ -0.4
E2F1-201ENST00000343380 VPS13DQ5THJ4 4388 aa12.55□□□□□ -0.4
E2F1-201ENST00000343380 PSORS1C2Q9UIG4 136 aa12.55□□□□□ -0.4
E2F1-201ENST00000343380 KMT2AQ03164 3969 aa12.52□□□□□ -0.41
E2F1-201ENST00000343380 LCA10Q71F78 164 aa12.51□□□□□ -0.41
E2F1-201ENST00000343380 DNAH2Q9P225 4427 aa12.5□□□□□ -0.41
E2F1-201ENST00000343380 A0A087WTM6 91 aa12.5□□□□□ -0.41
E2F1-201ENST00000343380 LOC101927531A0A1B0GV80 90 aa12.5□□□□□ -0.41
E2F1-201ENST00000343380 MRPL34Q9BQ48 92 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms