RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 GVQW2A0A096LPI5 108 aaPredicted RBP8.85□□□□□ -0.99
TMEM248-201ENST00000341567 OBSCN-AS1Q96MR7 158 aa8.85□□□□□ -0.99
TMEM248-201ENST00000341567 PKD1L1Q8TDX9 2849 aa8.84□□□□□ -0.99
TMEM248-201ENST00000341567 Q8N377 158 aa8.83□□□□□ -1
TMEM248-201ENST00000341567 PDZD2O15018 2839 aa8.83□□□□□ -1
TMEM248-201ENST00000341567 Q8NDZ9 215 aa8.83□□□□□ -1
TMEM248-201ENST00000341567 A8MUN3 132 aa8.82□□□□□ -1
TMEM248-201ENST00000341567 hDV103S1A0JD37 113 aa8.81□□□□□ -1
TMEM248-201ENST00000341567 EPM2AB3EWF7 344 aa8.8□□□□□ -1
TMEM248-201ENST00000341567 SEC61GP60059 68 aa8.79□□□□□ -1
TMEM248-201ENST00000341567 SPAG11AQ6PDA7 123 aa8.79□□□□□ -1
TMEM248-201ENST00000341567 TENM3Q9P273 2699 aa8.78□□□□□ -1
TMEM248-201ENST00000341567 F8WDY8 70 aa8.78□□□□□ -1
TMEM248-201ENST00000341567 MOBPQ13875 183 aa8.78□□□□□ -1
TMEM248-201ENST00000341567 ZNF706Q9Y5V0 76 aaPredicted RBP8.77□□□□□ -1.01
TMEM248-201ENST00000341567 C16orf90A8MZG2 172 aa8.77□□□□□ -1.01
TMEM248-201ENST00000341567 KCNQ1DNQ9H478 68 aa8.76□□□□□ -1.01
TMEM248-201ENST00000341567 RTL8CO15255 209 aa8.76□□□□□ -1.01
TMEM248-201ENST00000341567 ERC2-IT1O76042 136 aa8.75□□□□□ -1.01
TMEM248-201ENST00000341567 A0A1W2PNM2 257 aa8.75□□□□□ -1.01
TMEM248-201ENST00000341567 ANAPC11Q9NYG5 84 aa8.75□□□□□ -1.01
TMEM248-201ENST00000341567 OXTP01178 125 aa8.74□□□□□ -1.01
TMEM248-201ENST00000341567 IGLV1-50A0A075B6I6 118 aa8.72□□□□□ -1.01
TMEM248-201ENST00000341567 LIMD2Q9BT23 127 aa8.72□□□□□ -1.01
TMEM248-201ENST00000341567 TRAV22A0A0B4J277 110 aa8.71□□□□□ -1.01
TMEM248-201ENST00000341567 SPINK1P00995 79 aa8.71□□□□□ -1.01
TMEM248-201ENST00000341567 IGFL1Q6UW32 110 aa8.71□□□□□ -1.01
TMEM248-201ENST00000341567 Q5XG85 94 aa8.7□□□□□ -1.02
TMEM248-201ENST00000341567 A0A1B0GW54 56 aa8.69□□□□□ -1.02
TMEM248-201ENST00000341567 SPACA4Q8TDM5 124 aa8.67□□□□□ -1.02
TMEM248-201ENST00000341567 OCR1Q9BZK8 76 aa8.67□□□□□ -1.02
TMEM248-201ENST00000341567 DMBT1Q9UGM3 2413 aaPredicted RBP8.65□□□□□ -1.02
TMEM248-201ENST00000341567 FP248Q71RG6 208 aaPredicted RBP8.65□□□□□ -1.02
TMEM248-201ENST00000341567 APLNQ9ULZ1 77 aa8.65□□□□□ -1.03
TMEM248-201ENST00000341567 FAM229BQ4G0N7 80 aa8.64□□□□□ -1.03
TMEM248-201ENST00000341567 VPS13CQ709C8 3753 aa8.64□□□□□ -1.03
TMEM248-201ENST00000341567 C9orf163Q8N9P6 203 aa8.62□□□□□ -1.03
TMEM248-201ENST00000341567 IGKV2D-30A0A075B6S6 120 aa8.62□□□□□ -1.03
TMEM248-201ENST00000341567 IGKV2-30P06310 120 aa8.62□□□□□ -1.03
TMEM248-201ENST00000341567 A0A087WTM6 91 aa8.62□□□□□ -1.03
TMEM248-201ENST00000341567 WIPF1O43516 503 aa8.61□□□□□ -1.03
TMEM248-201ENST00000341567 COA5Q86WW8 74 aa8.61□□□□□ -1.03
TMEM248-201ENST00000341567 A8MWP4 228 aa8.61□□□□□ -1.03
TMEM248-201ENST00000341567 IGLV5-48A0A075B6I7 105 aa8.6□□□□□ -1.03
TMEM248-201ENST00000341567 PRR15Q8IV56 129 aa8.59□□□□□ -1.03
TMEM248-201ENST00000341567 WWC2-AS2Q96NR7 200 aa8.59□□□□□ -1.03
TMEM248-201ENST00000341567 SMR3BP02814 79 aaPredicted RBP8.59□□□□□ -1.03
TMEM248-201ENST00000341567 KRTAP1-5Q9BYS1 174 aa8.59□□□□□ -1.03
TMEM248-201ENST00000341567 TENM2Q9NT68 2774 aa8.59□□□□□ -1.04
TMEM248-201ENST00000341567 IGLV8-61A0A075B6I0 122 aa8.58□□□□□ -1.04
TMEM248-201ENST00000341567 DSCR10P59022 87 aa8.58□□□□□ -1.04
TMEM248-201ENST00000341567 TP53AIP1Q9HCN2 124 aa8.57□□□□□ -1.04
TMEM248-201ENST00000341567 H3BPC8 53 aa8.56□□□□□ -1.04
TMEM248-201ENST00000341567 A0A1B0GU69 56 aa8.54□□□□□ -1.04
TMEM248-201ENST00000341567 TLX1NBP0CAT3 122 aa8.54□□□□□ -1.04
TMEM248-201ENST00000341567 PSORS1C2Q9UIG4 136 aa8.53□□□□□ -1.04
TMEM248-201ENST00000341567 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.53□□□□□ -1.04
TMEM248-201ENST00000341567 TNP2Q05952 138 aa8.53□□□□□ -1.04
TMEM248-201ENST00000341567 ACYP2P14621 99 aa8.49□□□□□ -1.05
TMEM248-201ENST00000341567 TGP01266 2768 aa8.49□□□□□ -1.05
TMEM248-201ENST00000341567 PLA2G1BP04054 148 aaKnown RBP8.48□□□□□ -1.05
TMEM248-201ENST00000341567 LOC101927531A0A1B0GV80 90 aa8.48□□□□□ -1.05
TMEM248-201ENST00000341567 MRPL34Q9BQ48 92 aaKnown RBP8.48□□□□□ -1.05
TMEM248-201ENST00000341567 C8orf17Q9NRJ1 99 aa8.48□□□□□ -1.05
TMEM248-201ENST00000341567 CNBPP62633 177 aaKnown RBP8.47□□□□□ -1.05
TMEM248-201ENST00000341567 ATP11AUNQ6ZP68 121 aa8.47□□□□□ -1.05
TMEM248-201ENST00000341567 K7ERS5 55 aa8.47□□□□□ -1.05
TMEM248-201ENST00000341567 KRTAP26-1Q6PEX3 210 aa8.47□□□□□ -1.05
TMEM248-201ENST00000341567 TYMSOSQ8TAI1 123 aa8.46□□□□□ -1.05
TMEM248-201ENST00000341567 PLA2G2DQ9UNK4 145 aa8.46□□□□□ -1.05
TMEM248-201ENST00000341567 ZNF861PO60384 105 aa8.46□□□□□ -1.06
TMEM248-201ENST00000341567 SPRR4Q96PI1 79 aa8.45□□□□□ -1.06
TMEM248-201ENST00000341567 C7orf65Q6ZTY9 151 aa8.45□□□□□ -1.06
TMEM248-201ENST00000341567 SRRM2Q9UQ35 2752 aaKnown RBP8.44□□□□□ -1.06
TMEM248-201ENST00000341567 FLG2Q5D862 2391 aaPredicted RBP8.44□□□□□ -1.06
TMEM248-201ENST00000341567 CYP4F30PQ9H0H9 118 aa8.44□□□□□ -1.06
TMEM248-201ENST00000341567 PRR26Q8N8Z3 221 aa8.43□□□□□ -1.06
TMEM248-201ENST00000341567 LINC00313P59037 77 aa8.41□□□□□ -1.06
TMEM248-201ENST00000341567 TRRAPQ9Y4A5 3859 aa8.41□□□□□ -1.06
TMEM248-201ENST00000341567 A0A1B0GVX0 72 aa8.4□□□□□ -1.06
TMEM248-201ENST00000341567 Q1T7F1 81 aa8.4□□□□□ -1.06
TMEM248-201ENST00000341567 PANO1I0J062 215 aa8.37□□□□□ -1.07
TMEM248-201ENST00000341567 IGLV7-43P04211 117 aa8.37□□□□□ -1.07
TMEM248-201ENST00000341567 IGLV5-37A0A075B6J1 123 aa8.36□□□□□ -1.07
TMEM248-201ENST00000341567 SPANXA2-OT1Q8N9U9 137 aa8.35□□□□□ -1.07
TMEM248-201ENST00000341567 CD164Q04900 197 aa8.35□□□□□ -1.07
TMEM248-201ENST00000341567 Q96NJ1 140 aa8.35□□□□□ -1.07
TMEM248-201ENST00000341567 KTN1-AS1Q86SY8 53 aa8.34□□□□□ -1.07
TMEM248-201ENST00000341567 SPRR1AP35321 89 aa8.34□□□□□ -1.07
TMEM248-201ENST00000341567 Q8N9P0 234 aaPredicted RBP8.34□□□□□ -1.08
TMEM248-201ENST00000341567 ZNF469Q96JG9 3925 aaPredicted RBP8.32□□□□□ -1.08
TMEM248-201ENST00000341567 C8orf87E5RJ46 101 aa8.32□□□□□ -1.08
TMEM248-201ENST00000341567 C9orf92A6NGG3 77 aa8.31□□□□□ -1.08
TMEM248-201ENST00000341567 FAM229AH3BQW9 127 aa8.31□□□□□ -1.08
TMEM248-201ENST00000341567 Q5VV11 94 aa8.28□□□□□ -1.08
TMEM248-201ENST00000341567 UQCR11O14957 56 aa8.27□□□□□ -1.08
TMEM248-201ENST00000341567 CDC42SE1Q9NRR8 79 aa8.27□□□□□ -1.09
TMEM248-201ENST00000341567 MMP24-AS1A0A0U1RRL7 71 aa8.26□□□□□ -1.09
TMEM248-201ENST00000341567 IGLV7-46A0A075B6I9 117 aa8.25□□□□□ -1.09
TMEM248-201ENST00000341567 MIR22HGQ0VDD5 57 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms