RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 ZNF22P17026 224 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-201ENST00000340660 TOMM6Q96B49 74 aa4.43□□□□□ -1.7
ATXN3-201ENST00000340660 FA2HQ7L5A8 372 aa4.42□□□□□ -1.7
ATXN3-201ENST00000340660 A0A1B0GWB2 263 aa4.41□□□□□ -1.7
ATXN3-201ENST00000340660 ERASQ7Z444 233 aa4.41□□□□□ -1.7
ATXN3-201ENST00000340660 SPANXB1Q9NS25 103 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-201ENST00000340660 NAT8BQ9UHF3 227 aa4.41□□□□□ -1.7
ATXN3-201ENST00000340660 V9GYV3 84 aa4.41□□□□□ -1.7
ATXN3-201ENST00000340660 HINT1P49773 126 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-201ENST00000340660 SCGB3A1Q96QR1 104 aa4.4□□□□□ -1.71
ATXN3-201ENST00000340660 MAP1LC3AQ9H492 121 aa4.4□□□□□ -1.71
ATXN3-201ENST00000340660 IGLC3P0DOY3 106 aa4.39□□□□□ -1.71
ATXN3-201ENST00000340660 FAM74A3Q4VXF1 159 aa4.39□□□□□ -1.71
ATXN3-201ENST00000340660 IGLV5-48A0A075B6I7 105 aa4.38□□□□□ -1.71
ATXN3-201ENST00000340660 MEIG1Q5JSS6 88 aa4.38□□□□□ -1.71
ATXN3-201ENST00000340660 OSTCQ9NRP0 149 aa4.38□□□□□ -1.71
ATXN3-201ENST00000340660 A0A1B0GW15 77 aa4.37□□□□□ -1.71
ATXN3-201ENST00000340660 F8W036 122 aa4.37□□□□□ -1.71
ATXN3-201ENST00000340660 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-201ENST00000340660 A0A1B0GXF2 115 aa4.35□□□□□ -1.71
ATXN3-201ENST00000340660 K7EMI3 77 aa4.35□□□□□ -1.71
ATXN3-201ENST00000340660 MRPL54Q6P161 138 aaKnown RBP4.35□□□□□ -1.71
ATXN3-201ENST00000340660 LINC00313P59037 77 aa4.34□□□□□ -1.71
ATXN3-201ENST00000340660 KLKP1Q107X0 134 aa4.34□□□□□ -1.71
ATXN3-201ENST00000340660 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
ATXN3-201ENST00000340660 NXT2Q9NPJ8 142 aaKnown RBP4.34□□□□□ -1.71
ATXN3-201ENST00000340660 COLCA2A8K830 154 aa4.33□□□□□ -1.72
ATXN3-201ENST00000340660 ELOF1P60002 83 aaKnown RBP4.33□□□□□ -1.72
ATXN3-201ENST00000340660 BATF3Q9NR55 127 aa4.33□□□□□ -1.72
ATXN3-201ENST00000340660 LAMTOR2Q9Y2Q5 125 aa4.33□□□□□ -1.72
ATXN3-201ENST00000340660 SMIM27A0A1W2PRY6 76 aa4.32□□□□□ -1.72
ATXN3-201ENST00000340660 SOSTDC1Q6X4U4 206 aa4.32□□□□□ -1.72
ATXN3-201ENST00000340660 CLEC2BQ92478 149 aa4.32□□□□□ -1.72
ATXN3-201ENST00000340660 SNRPEP62304 92 aaKnown RBP4.31□□□□□ -1.72
ATXN3-201ENST00000340660 CYSTM1Q9H1C7 97 aa4.31□□□□□ -1.72
ATXN3-201ENST00000340660 NDUFC2O95298 119 aa4.3□□□□□ -1.72
ATXN3-201ENST00000340660 COX7BP24311 80 aa4.3□□□□□ -1.72
ATXN3-201ENST00000340660 G0S2P27469 103 aa4.3□□□□□ -1.72
ATXN3-201ENST00000340660 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
ATXN3-201ENST00000340660 ARPC5O15511 151 aa4.29□□□□□ -1.72
ATXN3-201ENST00000340660 S100A8P05109 93 aa4.29□□□□□ -1.72
ATXN3-201ENST00000340660 C5orf47Q569G3 176 aa4.29□□□□□ -1.72
ATXN3-201ENST00000340660 C11orf86A6NJI1 115 aa4.27□□□□□ -1.73
ATXN3-201ENST00000340660 KRTAP5-8O75690 187 aa4.27□□□□□ -1.73
ATXN3-201ENST00000340660 TMEM170BQ5T4T1 132 aa4.27□□□□□ -1.73
ATXN3-201ENST00000340660 TEX46H3BTG2 121 aa4.26□□□□□ -1.73
ATXN3-201ENST00000340660 Q6JHZ5 121 aa4.26□□□□□ -1.73
ATXN3-201ENST00000340660 F8WEM9 126 aa4.25□□□□□ -1.73
ATXN3-201ENST00000340660 TMEM250H0YL14 139 aa4.25□□□□□ -1.73
ATXN3-201ENST00000340660 CEBPGP53567 150 aa4.25□□□□□ -1.73
ATXN3-201ENST00000340660 MAP1LC3CQ9BXW4 147 aa4.25□□□□□ -1.73
ATXN3-201ENST00000340660 HERV-K104P63124 156 aa4.24□□□□□ -1.73
ATXN3-201ENST00000340660 CBY1Q9Y3M2 126 aa4.24□□□□□ -1.73
ATXN3-201ENST00000340660 LINC00587B1AMM8 73 aa4.23□□□□□ -1.73
ATXN3-201ENST00000340660 IFITM3Q01628 133 aa4.22□□□□□ -1.73
ATXN3-201ENST00000340660 LCA10Q71F78 164 aa4.22□□□□□ -1.73
ATXN3-201ENST00000340660 SIGMAR1Q99720 223 aa4.22□□□□□ -1.73
ATXN3-201ENST00000340660 SMIM7Q9BQ49 75 aa4.22□□□□□ -1.73
ATXN3-201ENST00000340660 COMMD7Q86VX2 200 aa4.21□□□□□ -1.74
ATXN3-201ENST00000340660 MIEN1Q9BRT3 115 aa4.21□□□□□ -1.74
ATXN3-201ENST00000340660 A0A0J9YXY3 114 aa4.2□□□□□ -1.74
ATXN3-201ENST00000340660 TMEM223A0PJW6 202 aa4.2□□□□□ -1.74
ATXN3-201ENST00000340660 SS18L2Q9UHA2 77 aa4.2□□□□□ -1.74
ATXN3-201ENST00000340660 ZNF815PA8K554 130 aa4.19□□□□□ -1.74
ATXN3-201ENST00000340660 PRR15Q8IV56 129 aa4.19□□□□□ -1.74
ATXN3-201ENST00000340660 OR13C6PQ8NH95 151 aa4.18□□□□□ -1.74
ATXN3-201ENST00000340660 LINC01549A6NIU2 74 aa4.16□□□□□ -1.74
ATXN3-201ENST00000340660 NPC2P61916 151 aa4.16□□□□□ -1.74
ATXN3-201ENST00000340660 RHEBQ15382 184 aa4.16□□□□□ -1.74
ATXN3-201ENST00000340660 CRIPTQ9P021 101 aa4.15□□□□□ -1.75
ATXN3-201ENST00000340660 MYMXA0A1B0GTQ4 84 aa4.14□□□□□ -1.75
ATXN3-201ENST00000340660 HBDP02042 147 aa4.14□□□□□ -1.75
ATXN3-201ENST00000340660 OCIAD2Q56VL3 154 aa4.14□□□□□ -1.75
ATXN3-201ENST00000340660 ATP5L2Q7Z4Y8 100 aa4.14□□□□□ -1.75
ATXN3-201ENST00000340660 NHP2Q9NX24 153 aaKnown RBP4.14□□□□□ -1.75
ATXN3-201ENST00000340660 TRAV13-2A0A0B4J235 113 aa4.13□□□□□ -1.75
ATXN3-201ENST00000340660 LINC00518Q8N0U6 118 aa4.13□□□□□ -1.75
ATXN3-201ENST00000340660 PRO0461Q9UI25 63 aa4.13□□□□□ -1.75
ATXN3-201ENST00000340660 LINC01546A6NGU7 62 aa4.12□□□□□ -1.75
ATXN3-201ENST00000340660 MT1EP04732 61 aa4.12□□□□□ -1.75
ATXN3-201ENST00000340660 TRBV7-6A0A0J9YX20 115 aa4.11□□□□□ -1.75
ATXN3-201ENST00000340660 SMLR1H3BR10 107 aa4.11□□□□□ -1.75
ATXN3-201ENST00000340660 KRTAP19-7Q3SYF9 63 aa4.11□□□□□ -1.75
ATXN3-201ENST00000340660 A0A087WSZ3 146 aa4.1□□□□□ -1.75
ATXN3-201ENST00000340660 KANTRA0A1W2PQU2 76 aa4.1□□□□□ -1.75
ATXN3-201ENST00000340660 TSPEAR-AS2P59090 65 aa4.1□□□□□ -1.75
ATXN3-201ENST00000340660 H0YAA0 97 aa4.09□□□□□ -1.75
ATXN3-201ENST00000340660 ADIRFQ15847 76 aa4.09□□□□□ -1.75
ATXN3-201ENST00000340660 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
ATXN3-201ENST00000340660 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
ATXN3-201ENST00000340660 BAGE3Q86Y29 109 aa4.09□□□□□ -1.75
ATXN3-201ENST00000340660 IGHV6-1A0A0B4J1U7 121 aa4.08□□□□□ -1.76
ATXN3-201ENST00000340660 H3BUT2 72 aa4.08□□□□□ -1.76
ATXN3-201ENST00000340660 PLAC4Q8WY50 150 aa4.08□□□□□ -1.76
ATXN3-201ENST00000340660 SPANXDQ9BXN6 97 aa4.08□□□□□ -1.76
ATXN3-201ENST00000340660 IGKV4-1P06312 121 aa4.07□□□□□ -1.76
ATXN3-201ENST00000340660 CSAG1Q6PB30 78 aa4.07□□□□□ -1.76
ATXN3-201ENST00000340660 SLC7A5P1Q8MH63 180 aa4.06□□□□□ -1.76
ATXN3-201ENST00000340660 A0A096LNJ9 63 aa4.05□□□□□ -1.76
ATXN3-201ENST00000340660 SCGB1D1O95968 90 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 1488.1 ms