RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 SPRR1AP35321 89 aa9.12□□□□□ -0.95
CPSF7-201ENST00000340437 TNP2Q05952 138 aa9.12□□□□□ -0.95
CPSF7-201ENST00000340437 K7EIL1 84 aa9.12□□□□□ -0.95
CPSF7-201ENST00000340437 HCG22E2RYF7 251 aa9.11□□□□□ -0.95
CPSF7-201ENST00000340437 ATP5EP56381 51 aaPredicted RBP9.11□□□□□ -0.95
CPSF7-201ENST00000340437 KRTAP1-5Q9BYS1 174 aa9.1□□□□□ -0.95
CPSF7-201ENST00000340437 PLA2G2DQ9UNK4 145 aa9.1□□□□□ -0.95
CPSF7-201ENST00000340437 LINC00208Q96KT6 92 aa9.08□□□□□ -0.96
CPSF7-201ENST00000340437 SPRR4Q96PI1 79 aa9.08□□□□□ -0.96
CPSF7-201ENST00000340437 COL7A1Q02388 2944 aa9.08□□□□□ -0.96
CPSF7-201ENST00000340437 IGLV5-37A0A075B6J1 123 aa9.07□□□□□ -0.96
CPSF7-201ENST00000340437 PSPHP1O15172 72 aa9.06□□□□□ -0.96
CPSF7-201ENST00000340437 PRO0628Q9UI54 55 aa9.06□□□□□ -0.96
CPSF7-201ENST00000340437 C1orf64Q8NEQ6 169 aa9.06□□□□□ -0.96
CPSF7-201ENST00000340437 H0Y9J4 135 aa9.05□□□□□ -0.96
CPSF7-201ENST00000340437 KRTAP11-1Q8IUC1 163 aa9.05□□□□□ -0.96
CPSF7-201ENST00000340437 MDFIQ99750 246 aa9.04□□□□□ -0.96
CPSF7-201ENST00000340437 IGLV9-49A0A0B4J1Y8 123 aa9.03□□□□□ -0.96
CPSF7-201ENST00000340437 MP68P56378 58 aa9.03□□□□□ -0.96
CPSF7-201ENST00000340437 C16orf90A8MZG2 172 aa9.02□□□□□ -0.96
CPSF7-201ENST00000340437 DNAH10Q8IVF4 4471 aa9.01□□□□□ -0.97
CPSF7-201ENST00000340437 CASC2Q6XLA1 102 aa8.99□□□□□ -0.97
CPSF7-201ENST00000340437 LYSTQ99698 3801 aa8.99□□□□□ -0.97
CPSF7-201ENST00000340437 A0A1B0GW54 56 aa8.99□□□□□ -0.97
CPSF7-201ENST00000340437 hDV103S1A0JD37 113 aa8.98□□□□□ -0.97
CPSF7-201ENST00000340437 LY6G6CO95867 125 aa8.97□□□□□ -0.97
CPSF7-201ENST00000340437 H0Y9P7 68 aa8.96□□□□□ -0.97
CPSF7-201ENST00000340437 NDUFS5O43920 106 aa8.96□□□□□ -0.97
CPSF7-201ENST00000340437 SPINK6Q6UWN8 80 aa8.96□□□□□ -0.98
CPSF7-201ENST00000340437 PANO1I0J062 215 aa8.94□□□□□ -0.98
CPSF7-201ENST00000340437 B9D2Q9BPU9 175 aa8.94□□□□□ -0.98
CPSF7-201ENST00000340437 ANAPC11Q9NYG5 84 aa8.93□□□□□ -0.98
CPSF7-201ENST00000340437 PCOTHQ58A44 107 aa8.92□□□□□ -0.98
CPSF7-201ENST00000340437 ZCCHC13Q8WW36 166 aaKnown RBP8.92□□□□□ -0.98
CPSF7-201ENST00000340437 CNBPP62633 177 aaKnown RBP8.9□□□□□ -0.98
CPSF7-201ENST00000340437 PRR15Q8IV56 129 aa8.9□□□□□ -0.99
CPSF7-201ENST00000340437 CMYA5Q8N3K9 4069 aa8.89□□□□□ -0.99
CPSF7-201ENST00000340437 HUWE1Q7Z6Z7 4374 aaKnown RBP8.89□□□□□ -0.99
CPSF7-201ENST00000340437 A8MUN3 132 aa8.89□□□□□ -0.99
CPSF7-201ENST00000340437 TRAV22A0A0B4J277 110 aa8.89□□□□□ -0.99
CPSF7-201ENST00000340437 LCE6AA0A183 80 aa8.88□□□□□ -0.99
CPSF7-201ENST00000340437 NDUFB1O75438 58 aa8.87□□□□□ -0.99
CPSF7-201ENST00000340437 C14orf177Q52M58 125 aa8.86□□□□□ -0.99
CPSF7-201ENST00000340437 A8MWP4 228 aa8.86□□□□□ -0.99
CPSF7-201ENST00000340437 C1orf195Q5TG92 126 aa8.86□□□□□ -0.99
CPSF7-201ENST00000340437 APLNQ9ULZ1 77 aa8.85□□□□□ -0.99
CPSF7-201ENST00000340437 IGHV6-1A0A0B4J1U7 121 aa8.85□□□□□ -0.99
CPSF7-201ENST00000340437 C9orf163Q8N9P6 203 aa8.84□□□□□ -0.99
CPSF7-201ENST00000340437 IGLV8-61A0A075B6I0 122 aa8.83□□□□□ -1
CPSF7-201ENST00000340437 LINC00472Q9H8W2 130 aa8.83□□□□□ -1
CPSF7-201ENST00000340437 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.83□□□□□ -1
CPSF7-201ENST00000340437 KRTAP29-1A8MX34 341 aaPredicted RBP8.83□□□□□ -1
CPSF7-201ENST00000340437 CDK2AP2O75956 126 aa8.82□□□□□ -1
CPSF7-201ENST00000340437 NBDYA0A0U1RRE5 68 aa8.81□□□□□ -1
CPSF7-201ENST00000340437 A8MU10 97 aa8.81□□□□□ -1
CPSF7-201ENST00000340437 DNAH9Q9NYC9 4486 aa8.8□□□□□ -1
CPSF7-201ENST00000340437 RETNLBQ9BQ08 111 aa8.8□□□□□ -1
CPSF7-201ENST00000340437 MOBPQ13875 183 aa8.79□□□□□ -1
CPSF7-201ENST00000340437 PRR15LQ9BU68 103 aa8.79□□□□□ -1
CPSF7-201ENST00000340437 CHKB-CPT1BH3BT56 60 aa8.79□□□□□ -1
CPSF7-201ENST00000340437 Q1T7F1 81 aa8.78□□□□□ -1
CPSF7-201ENST00000340437 CYP4F30PQ9H0H9 118 aa8.78□□□□□ -1
CPSF7-201ENST00000340437 MMP24-AS1A0A0U1RRL7 71 aa8.77□□□□□ -1.01
CPSF7-201ENST00000340437 DNAH1Q9P2D7 4330 aa8.77□□□□□ -1.01
CPSF7-201ENST00000340437 CIRBP-AS1Q8TBR5 109 aa8.76□□□□□ -1.01
CPSF7-201ENST00000340437 SPTSSBQ8NFR3 76 aa8.75□□□□□ -1.01
CPSF7-201ENST00000340437 FBN3Q75N90 2809 aa8.75□□□□□ -1.01
CPSF7-201ENST00000340437 SPRR1BP22528 89 aa8.74□□□□□ -1.01
CPSF7-201ENST00000340437 IGLV5-52A0A0A0MRZ9 124 aa8.73□□□□□ -1.01
CPSF7-201ENST00000340437 DNAH7Q8WXX0 4024 aa8.72□□□□□ -1.01
CPSF7-201ENST00000340437 COA5Q86WW8 74 aa8.72□□□□□ -1.01
CPSF7-201ENST00000340437 NUPR2A6NF83 97 aa8.71□□□□□ -1.02
CPSF7-201ENST00000340437 PSORS1C2Q9UIG4 136 aa8.71□□□□□ -1.02
CPSF7-201ENST00000340437 DNAH3Q8TD57 4116 aa8.71□□□□□ -1.02
CPSF7-201ENST00000340437 SPAG11AQ6PDA7 123 aa8.7□□□□□ -1.02
CPSF7-201ENST00000340437 A0A087X002 238 aa8.7□□□□□ -1.02
CPSF7-201ENST00000340437 NOTCH2NLQ7Z3S9 236 aa8.7□□□□□ -1.02
CPSF7-201ENST00000340437 C8orf17Q9NRJ1 99 aa8.7□□□□□ -1.02
CPSF7-201ENST00000340437 V9GYY9 64 aa8.7□□□□□ -1.02
CPSF7-201ENST00000340437 Q8N9P0 234 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-201ENST00000340437 A6NED7 52 aa8.68□□□□□ -1.02
CPSF7-201ENST00000340437 Q5VV11 94 aa8.68□□□□□ -1.02
CPSF7-201ENST00000340437 RTL8CO15255 209 aa8.67□□□□□ -1.02
CPSF7-201ENST00000340437 CD164Q04900 197 aa8.67□□□□□ -1.02
CPSF7-201ENST00000340437 PMAIP1Q13794 54 aa8.67□□□□□ -1.02
CPSF7-201ENST00000340437 SPACA4Q8TDM5 124 aa8.66□□□□□ -1.02
CPSF7-201ENST00000340437 H3BPC8 53 aa8.66□□□□□ -1.02
CPSF7-201ENST00000340437 A0A087WTM6 91 aa8.66□□□□□ -1.02
CPSF7-201ENST00000340437 Q96NJ1 140 aa8.66□□□□□ -1.02
CPSF7-201ENST00000340437 KRTAP13-1Q8IUC0 172 aa8.65□□□□□ -1.02
CPSF7-201ENST00000340437 SPANXA2-OT1Q8N9U9 137 aa8.65□□□□□ -1.02
CPSF7-201ENST00000340437 Q6ZRN7 208 aaPredicted RBP8.65□□□□□ -1.03
CPSF7-201ENST00000340437 C1orf134Q5TEV5 83 aa8.64□□□□□ -1.03
CPSF7-201ENST00000340437 PLECQ15149 4684 aaKnown RBP8.64□□□□□ -1.03
CPSF7-201ENST00000340437 A0A1B0GVX0 72 aa8.63□□□□□ -1.03
CPSF7-201ENST00000340437 WWC2-AS2Q96NR7 200 aa8.61□□□□□ -1.03
CPSF7-201ENST00000340437 LIMD2Q9BT23 127 aa8.61□□□□□ -1.03
CPSF7-201ENST00000340437 MRPL34Q9BQ48 92 aaKnown RBP8.61□□□□□ -1.03
CPSF7-201ENST00000340437 IGLV7-46A0A075B6I9 117 aa8.6□□□□□ -1.03
CPSF7-201ENST00000340437 ZNF706Q9Y5V0 76 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms