RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 GCN1Q92616 2671 aaKnown RBP1.96□□□□□ -2.1
SOCS4-201ENST00000339298 CSMD1Q96PZ7 3565 aa1.96□□□□□ -2.1
SOCS4-201ENST00000339298 PIEZO2Q9H5I5 2752 aa1.96□□□□□ -2.1
SOCS4-201ENST00000339298 PP632Q6XCG6 107 aa1.96□□□□□ -2.1
SOCS4-201ENST00000339298 M0R2N4 97 aa1.96□□□□□ -2.1
SOCS4-201ENST00000339298 GIG44P09565 113 aaPredicted RBP1.96□□□□□ -2.1
SOCS4-201ENST00000339298 KCNQ1DNQ9H478 68 aa1.96□□□□□ -2.1
SOCS4-201ENST00000339298 ANKRD17O75179 2603 aaKnown RBP1.96□□□□□ -2.1
SOCS4-201ENST00000339298 NYNRINQ9P2P1 1898 aaKnown RBP1.95□□□□□ -2.1
SOCS4-201ENST00000339298 USP24Q9UPU5 2620 aa1.95□□□□□ -2.1
SOCS4-201ENST00000339298 SPATA8Q6RVD6 105 aa1.95□□□□□ -2.1
SOCS4-201ENST00000339298 XP32Q5T750 250 aa1.95□□□□□ -2.1
SOCS4-201ENST00000339298 CHD6Q8TD26 2715 aa1.95□□□□□ -2.1
SOCS4-201ENST00000339298 K7EIM0 57 aa1.95□□□□□ -2.1
SOCS4-201ENST00000339298 LYNX1P0DP58 116 aa1.95□□□□□ -2.1
SOCS4-201ENST00000339298 UTRNP46939 3433 aa1.95□□□□□ -2.1
SOCS4-201ENST00000339298 LYNX1G3V0Z9 82 aa1.95□□□□□ -2.1
SOCS4-201ENST00000339298 HTTP42858 3142 aa1.94□□□□□ -2.1
SOCS4-201ENST00000339298 IGFL1Q6UW32 110 aa1.94□□□□□ -2.1
SOCS4-201ENST00000339298 MKI67P46013 3256 aaKnown RBP1.94□□□□□ -2.1
SOCS4-201ENST00000339298 RPL37P61927 97 aaKnown RBP1.94□□□□□ -2.1
SOCS4-201ENST00000339298 DEFB135Q30KP9 77 aa1.93□□□□□ -2.1
SOCS4-201ENST00000339298 CNFNQ9BYD5 112 aa1.93□□□□□ -2.1
SOCS4-201ENST00000339298 KRTAP4-16G5E9R7 235 aaPredicted RBP1.93□□□□□ -2.1
SOCS4-201ENST00000339298 DEFB109BQ30KR1 87 aa1.93□□□□□ -2.1
SOCS4-201ENST00000339298 Q6ZSA8 131 aa1.93□□□□□ -2.1
SOCS4-201ENST00000339298 Q5W150 140 aa1.93□□□□□ -2.1
SOCS4-201ENST00000339298 KRTAP3-1Q9BYR8 98 aa1.93□□□□□ -2.1
SOCS4-201ENST00000339298 LTBP2Q14767 1821 aa1.93□□□□□ -2.1
SOCS4-201ENST00000339298 Q96NJ1 140 aa1.93□□□□□ -2.1
SOCS4-201ENST00000339298 NBDYA0A0U1RRE5 68 aa1.92□□□□□ -2.1
SOCS4-201ENST00000339298 COL5A1P20908 1838 aaPredicted RBP1.92□□□□□ -2.1
SOCS4-201ENST00000339298 DEFB4AO15263 64 aa1.92□□□□□ -2.1
SOCS4-201ENST00000339298 CPAMD8Q8IZJ3 1885 aa1.92□□□□□ -2.1
SOCS4-201ENST00000339298 C10orf95Q9H7T3 257 aa1.92□□□□□ -2.1
SOCS4-201ENST00000339298 MYO15AQ9UKN7 3530 aa1.92□□□□□ -2.1
SOCS4-201ENST00000339298 DNHD1Q96M86 4753 aa1.92□□□□□ -2.1
SOCS4-201ENST00000339298 COL11A1P12107 1806 aaPredicted RBP1.91□□□□□ -2.1
SOCS4-201ENST00000339298 DEFB123Q8N688 67 aa1.91□□□□□ -2.1
SOCS4-201ENST00000339298 KRTAP26-1Q6PEX3 210 aa1.91□□□□□ -2.1
SOCS4-201ENST00000339298 ARID2Q68CP9 1835 aa1.9□□□□□ -2.11
SOCS4-201ENST00000339298 LINC01546A6NGU7 62 aa1.9□□□□□ -2.11
SOCS4-201ENST00000339298 U3KQA8 63 aa1.9□□□□□ -2.11
SOCS4-201ENST00000339298 C9orf92A6NGG3 77 aa1.9□□□□□ -2.11
SOCS4-201ENST00000339298 NBEAL1Q6ZS30 2694 aa1.89□□□□□ -2.11
SOCS4-201ENST00000339298 RYR3Q15413 4870 aa1.89□□□□□ -2.11
SOCS4-201ENST00000339298 SPACA4Q8TDM5 124 aa1.89□□□□□ -2.11
SOCS4-201ENST00000339298 USP34Q70CQ2 3546 aa1.89□□□□□ -2.11
SOCS4-201ENST00000339298 PLXNB2O15031 1838 aa1.88□□□□□ -2.11
SOCS4-201ENST00000339298 STAB2Q8WWQ8 2551 aa1.88□□□□□ -2.11
SOCS4-201ENST00000339298 J3QKU1 62 aa1.88□□□□□ -2.11
SOCS4-201ENST00000339298 PCSK5Q92824 1860 aa1.88□□□□□ -2.11
SOCS4-201ENST00000339298 COL6A5A8TX70 2615 aa1.87□□□□□ -2.11
SOCS4-201ENST00000339298 DMDP11532 3685 aa1.87□□□□□ -2.11
SOCS4-201ENST00000339298 P0C880 135 aa1.87□□□□□ -2.11
SOCS4-201ENST00000339298 LORP23490 312 aaPredicted RBP1.86□□□□□ -2.11
SOCS4-201ENST00000339298 MEGF8Q7Z7M0 2845 aa1.86□□□□□ -2.11
SOCS4-201ENST00000339298 DNAH14Q0VDD8 3507 aa1.86□□□□□ -2.11
SOCS4-201ENST00000339298 A0A096LNT2 108 aa1.86□□□□□ -2.11
SOCS4-201ENST00000339298 NIPBLQ6KC79 2804 aaeCLIP1.86□□□□□ -2.11
SOCS4-201ENST00000339298 ANK2Q01484 3957 aa1.86□□□□□ -2.11
SOCS4-201ENST00000339298 LINC01556Q5JQF7 62 aa1.86□□□□□ -2.11
SOCS4-201ENST00000339298 LCE2AQ5TA79 106 aaPredicted RBP1.86□□□□□ -2.11
SOCS4-201ENST00000339298 GVQW2A0A096LPI5 108 aaPredicted RBP1.85□□□□□ -2.11
SOCS4-201ENST00000339298 PANO1I0J062 215 aa1.85□□□□□ -2.11
SOCS4-201ENST00000339298 DCHS1Q96JQ0 3298 aa1.85□□□□□ -2.11
SOCS4-201ENST00000339298 H3BNG1 76 aa1.85□□□□□ -2.11
SOCS4-201ENST00000339298 SPRR4Q96PI1 79 aa1.85□□□□□ -2.11
SOCS4-201ENST00000339298 CFAP46Q8IYW2 2715 aa1.85□□□□□ -2.11
SOCS4-201ENST00000339298 NSD1Q96L73 2696 aaPredicted RBP1.85□□□□□ -2.11
SOCS4-201ENST00000339298 TEP1Q99973 2627 aaKnown RBP1.84□□□□□ -2.11
SOCS4-201ENST00000339298 PCNTO95613 3336 aa1.84□□□□□ -2.11
SOCS4-201ENST00000339298 AKAP9Q99996 3911 aa1.84□□□□□ -2.11
SOCS4-201ENST00000339298 LELP1Q5T871 98 aa1.84□□□□□ -2.11
SOCS4-201ENST00000339298 CSMD2Q7Z408 3487 aa1.84□□□□□ -2.11
SOCS4-201ENST00000339298 MAP1AP78559 2803 aaPredicted RBP1.84□□□□□ -2.11
SOCS4-201ENST00000339298 COL4A2P08572 1712 aa1.84□□□□□ -2.12
SOCS4-201ENST00000339298 RYR2Q92736 4967 aa1.84□□□□□ -2.12
SOCS4-201ENST00000339298 MUC2Q02817 5179 aa1.83□□□□□ -2.12
SOCS4-201ENST00000339298 ASPMQ8IZT6 3477 aa1.83□□□□□ -2.12
SOCS4-201ENST00000339298 ITPR3Q14573 2671 aa1.83□□□□□ -2.12
SOCS4-201ENST00000339298 A0A087WTM6 91 aa1.83□□□□□ -2.12
SOCS4-201ENST00000339298 PRR34Q9NV39 138 aa1.83□□□□□ -2.12
SOCS4-201ENST00000339298 NOTCH1P46531 2555 aa1.83□□□□□ -2.12
SOCS4-201ENST00000339298 DEFB124Q8NES8 71 aa1.83□□□□□ -2.12
SOCS4-201ENST00000339298 MUC22E2RYF6 1773 aaPredicted RBP1.83□□□□□ -2.12
SOCS4-201ENST00000339298 UBR4Q5T4S7 5183 aa1.83□□□□□ -2.12
SOCS4-201ENST00000339298 CENPFP49454 3210 aa1.82□□□□□ -2.12
SOCS4-201ENST00000339298 KRTAP7-1Q8IUC3 87 aa1.82□□□□□ -2.12
SOCS4-201ENST00000339298 RYR1P21817 5038 aa1.82□□□□□ -2.12
SOCS4-201ENST00000339298 CENPEQ02224 2701 aa1.82□□□□□ -2.12
SOCS4-201ENST00000339298 ZCCHC13Q8WW36 166 aaKnown RBP1.82□□□□□ -2.12
SOCS4-201ENST00000339298 COX6B2Q6YFQ2 88 aa1.81□□□□□ -2.12
SOCS4-201ENST00000339298 SVEP1Q4LDE5 3571 aa1.81□□□□□ -2.12
SOCS4-201ENST00000339298 KMT2AQ03164 3969 aa1.8□□□□□ -2.12
SOCS4-201ENST00000339298 PRO2289Q9P1D8 64 aa1.8□□□□□ -2.12
SOCS4-201ENST00000339298 KMT2CQ8NEZ4 4911 aaKnown RBP1.8□□□□□ -2.12
SOCS4-201ENST00000339298 LINC00472Q9H8W2 130 aa1.8□□□□□ -2.12
SOCS4-201ENST00000339298 FLNAP21333 2647 aaKnown RBP1.8□□□□□ -2.12
SOCS4-201ENST00000339298 LOC100996750A0A140TA64 210 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms