RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 NCOR2Q9Y618 2525 aa0.22□□□□□ -2.37
XRCC4-202ENST00000338635 PLXNC1O60486 1568 aa0.22□□□□□ -2.37
XRCC4-202ENST00000338635 SERF2P84101 59 aa0.22□□□□□ -2.37
XRCC4-202ENST00000338635 NCBP2-AS2Q69YL0 99 aa0.22□□□□□ -2.37
XRCC4-202ENST00000338635 FAT4Q6V0I7 4981 aa0.22□□□□□ -2.37
XRCC4-202ENST00000338635 RNF17Q9BXT8 1623 aaKnown RBP0.22□□□□□ -2.37
XRCC4-202ENST00000338635 UBR5O95071 2799 aaPredicted RBP0.22□□□□□ -2.37
XRCC4-202ENST00000338635 TRANK1O15050 2925 aa0.22□□□□□ -2.37
XRCC4-202ENST00000338635 IGSF10Q6WRI0 2623 aa0.21□□□□□ -2.38
XRCC4-202ENST00000338635 H0YGG7 62 aa0.21□□□□□ -2.38
XRCC4-202ENST00000338635 PRM1P04553 51 aa0.21□□□□□ -2.38
XRCC4-202ENST00000338635 IAPPP10997 89 aa0.21□□□□□ -2.38
XRCC4-202ENST00000338635 NMES1Q9C002 83 aa0.21□□□□□ -2.38
XRCC4-202ENST00000338635 CELSR1Q9NYQ6 3014 aa0.21□□□□□ -2.38
XRCC4-202ENST00000338635 ABCC6O95255 1503 aa0.2□□□□□ -2.38
XRCC4-202ENST00000338635 PHGR1C9JFL3 82 aa0.2□□□□□ -2.38
XRCC4-202ENST00000338635 DEFB130BP0DP73 79 aa0.2□□□□□ -2.38
XRCC4-202ENST00000338635 DEFB130AP0DP74 79 aa0.2□□□□□ -2.38
XRCC4-202ENST00000338635 FCER1GP30273 86 aa0.2□□□□□ -2.38
XRCC4-202ENST00000338635 MYCBP2O75592 4640 aa0.2□□□□□ -2.38
XRCC4-202ENST00000338635 EP300Q09472 2414 aaPredicted RBP0.2□□□□□ -2.38
XRCC4-202ENST00000338635 HIVEP3Q5T1R4 2406 aa0.2□□□□□ -2.38
XRCC4-202ENST00000338635 ABCA6Q8N139 1617 aa0.2□□□□□ -2.38
XRCC4-202ENST00000338635 TIAM1Q13009 1591 aa0.2□□□□□ -2.38
XRCC4-202ENST00000338635 WNK1Q9H4A3 2382 aa0.2□□□□□ -2.38
XRCC4-202ENST00000338635 MINOS1Q5TGZ0 78 aa0.19□□□□□ -2.38
XRCC4-202ENST00000338635 HRNRQ86YZ3 2850 aaPredicted RBP0.19□□□□□ -2.38
XRCC4-202ENST00000338635 PRKDCP78527 4128 aaKnown RBP0.19□□□□□ -2.38
XRCC4-202ENST00000338635 C3P01024 1663 aa0.19□□□□□ -2.38
XRCC4-202ENST00000338635 ABCA10Q8WWZ4 1543 aa0.19□□□□□ -2.38
XRCC4-202ENST00000338635 KIAA0586Q9BVV6 1533 aa0.19□□□□□ -2.38
XRCC4-202ENST00000338635 M0R1W7 72 aa0.19□□□□□ -2.38
XRCC4-202ENST00000338635 MAP1BP46821 2468 aaKnown RBP0.18□□□□□ -2.38
XRCC4-202ENST00000338635 APC2O95996 2303 aa0.18□□□□□ -2.38
XRCC4-202ENST00000338635 LPAP08519 4548 aa0.18□□□□□ -2.38
XRCC4-202ENST00000338635 DSPP15924 2871 aaKnown RBP0.18□□□□□ -2.38
XRCC4-202ENST00000338635 SPRR2DP22532 72 aa0.18□□□□□ -2.38
XRCC4-202ENST00000338635 CPS1P31327 1500 aa0.18□□□□□ -2.38
XRCC4-202ENST00000338635 TNXBP22105 4242 aa0.18□□□□□ -2.38
XRCC4-202ENST00000338635 DMBT1Q9UGM3 2413 aaPredicted RBP0.17□□□□□ -2.38
XRCC4-202ENST00000338635 EEA1Q15075 1411 aa0.17□□□□□ -2.38
XRCC4-202ENST00000338635 KMT2AQ03164 3969 aa0.17□□□□□ -2.38
XRCC4-202ENST00000338635 C6orf48Q9UBA6 75 aa0.17□□□□□ -2.38
XRCC4-202ENST00000338635 MAST4O15021 2626 aa0.17□□□□□ -2.38
XRCC4-202ENST00000338635 PRXQ9BXM0 1461 aa0.17□□□□□ -2.38
XRCC4-202ENST00000338635 ALS2Q96Q42 1657 aa0.17□□□□□ -2.38
XRCC4-202ENST00000338635 SETXQ7Z333 2677 aaKnown RBP0.17□□□□□ -2.38
XRCC4-202ENST00000338635 GLI2P10070 1586 aa0.16□□□□□ -2.38
XRCC4-202ENST00000338635 HMCN2Q8NDA2 5059 aa0.16□□□□□ -2.38
XRCC4-202ENST00000338635 DCHS2Q6V1P9 2916 aa0.16□□□□□ -2.38
XRCC4-202ENST00000338635 ALMS1Q8TCU4 4167 aa0.16□□□□□ -2.38
XRCC4-202ENST00000338635 LY75O60449 1722 aa0.16□□□□□ -2.38
XRCC4-202ENST00000338635 IGIPA6NJ69 53 aa0.15□□□□□ -2.38
XRCC4-202ENST00000338635 RPS27P42677 84 aaKnown RBP0.15□□□□□ -2.38
XRCC4-202ENST00000338635 PRLHP81277 87 aa0.15□□□□□ -2.38
XRCC4-202ENST00000338635 WT1-ASQ06250 92 aa0.15□□□□□ -2.38
XRCC4-202ENST00000338635 RPS27LQ71UM5 84 aaKnown RBP0.15□□□□□ -2.38
XRCC4-202ENST00000338635 STAB1Q9NY15 2570 aa0.15□□□□□ -2.39
XRCC4-202ENST00000338635 CACNA1AO00555 2505 aa0.15□□□□□ -2.39
XRCC4-202ENST00000338635 AKAP13Q12802 2813 aa0.15□□□□□ -2.39
XRCC4-202ENST00000338635 ACANP16112 2415 aa0.15□□□□□ -2.39
XRCC4-202ENST00000338635 SONP18583 2426 aaKnown RBP0.15□□□□□ -2.39
XRCC4-202ENST00000338635 KIF1AQ12756 1690 aa0.15□□□□□ -2.39
XRCC4-202ENST00000338635 PCNX1Q96RV3 2341 aa0.15□□□□□ -2.39
XRCC4-202ENST00000338635 TMEM167BQ9NRX6 74 aa0.15□□□□□ -2.39
XRCC4-202ENST00000338635 UGGT1Q9NYU2 1555 aa0.14□□□□□ -2.39
XRCC4-202ENST00000338635 MAST1Q9Y2H9 1570 aa0.14□□□□□ -2.39
XRCC4-202ENST00000338635 PRRC2CQ9Y520 2896 aaKnown RBP0.14□□□□□ -2.39
XRCC4-202ENST00000338635 HECTD1Q9ULT8 2610 aa0.14□□□□□ -2.39
XRCC4-202ENST00000338635 NBASA2RRP1 2371 aa0.14□□□□□ -2.39
XRCC4-202ENST00000338635 H0YGX0 51 aa0.14□□□□□ -2.39
XRCC4-202ENST00000338635 H3BUA1 57 aa0.14□□□□□ -2.39
XRCC4-202ENST00000338635 SPRR2BP35325 72 aa0.14□□□□□ -2.39
XRCC4-202ENST00000338635 COL7A1Q02388 2944 aa0.14□□□□□ -2.39
XRCC4-202ENST00000338635 DEFB106AQ8N104 65 aa0.14□□□□□ -2.39
XRCC4-202ENST00000338635 S4R3F8 94 aa0.14□□□□□ -2.39
XRCC4-202ENST00000338635 CLASP1Q7Z460 1538 aa0.14□□□□□ -2.39
XRCC4-202ENST00000338635 FLNBO75369 2602 aaKnown RBP0.13□□□□□ -2.39
XRCC4-202ENST00000338635 TNRC18O15417 2968 aaPredicted RBP0.13□□□□□ -2.39
XRCC4-202ENST00000338635 NSD1Q96L73 2696 aaPredicted RBP0.13□□□□□ -2.39
XRCC4-202ENST00000338635 HSPG2P98160 4391 aa0.13□□□□□ -2.39
XRCC4-202ENST00000338635 TIMM8BQ9Y5J9 83 aaPredicted RBP0.13□□□□□ -2.39
XRCC4-202ENST00000338635 ITSN2Q9NZM3 1697 aa0.13□□□□□ -2.39
XRCC4-202ENST00000338635 LRP1BQ9NZR2 4599 aa0.13□□□□□ -2.39
XRCC4-202ENST00000338635 PREX2Q70Z35 1606 aa0.13□□□□□ -2.39
XRCC4-202ENST00000338635 LYSTQ99698 3801 aa0.13□□□□□ -2.39
XRCC4-202ENST00000338635 CROCC2H7BZ55 1655 aa0.12□□□□□ -2.39
XRCC4-202ENST00000338635 FLNAP21333 2647 aaKnown RBP0.12□□□□□ -2.39
XRCC4-202ENST00000338635 C9orf92A6NGG3 77 aa0.12□□□□□ -2.39
XRCC4-202ENST00000338635 LINC00308Q8TCZ7 52 aa0.12□□□□□ -2.39
XRCC4-202ENST00000338635 SETD2Q9BYW2 2564 aaPredicted RBP0.12□□□□□ -2.39
XRCC4-202ENST00000338635 HECTD4Q9Y4D8 3996 aa0.12□□□□□ -2.39
XRCC4-202ENST00000338635 CREBBPQ92793 2442 aa0.11□□□□□ -2.39
XRCC4-202ENST00000338635 COL6A3P12111 3177 aa0.11□□□□□ -2.39
XRCC4-202ENST00000338635 PLNP26678 52 aa0.11□□□□□ -2.39
XRCC4-202ENST00000338635 ANKRD36CQ5JPF3 1778 aa0.11□□□□□ -2.39
XRCC4-202ENST00000338635 COL6A5A8TX70 2615 aa0.11□□□□□ -2.39
XRCC4-202ENST00000338635 FLNCQ14315 2725 aa0.11□□□□□ -2.39
XRCC4-202ENST00000338635 CDC42BPAQ5VT25 1732 aa0.11□□□□□ -2.39
XRCC4-202ENST00000338635 H3BNG1 76 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms