RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 OBSCN-AS1Q96MR7 158 aa8.97□□□□□ -0.97
CDK5RAP3-201ENST00000338399 GAGE2AQ6NT46 116 aa8.96□□□□□ -0.97
CDK5RAP3-201ENST00000338399 SS18L2Q9UHA2 77 aa8.96□□□□□ -0.97
CDK5RAP3-201ENST00000338399 JMJD7-PLA2G4BH0Y9G9 81 aa8.96□□□□□ -0.98
CDK5RAP3-201ENST00000338399 VPS13BQ7Z7G8 4022 aa8.95□□□□□ -0.98
CDK5RAP3-201ENST00000338399 C14orf132Q9NPU4 83 aa8.95□□□□□ -0.98
CDK5RAP3-201ENST00000338399 SRRM2Q9UQ35 2752 aaKnown RBP8.95□□□□□ -0.98
CDK5RAP3-201ENST00000338399 RBM3P98179 157 aaKnown RBP8.94□□□□□ -0.98
CDK5RAP3-201ENST00000338399 SMIM29Q86T20 159 aa8.93□□□□□ -0.98
CDK5RAP3-201ENST00000338399 RPL37AP61513 92 aaKnown RBP8.92□□□□□ -0.98
CDK5RAP3-201ENST00000338399 SPRR4Q96PI1 79 aa8.92□□□□□ -0.98
CDK5RAP3-201ENST00000338399 CCDC179H3BU77 68 aa8.91□□□□□ -0.98
CDK5RAP3-201ENST00000338399 SPRR1BP22528 89 aa8.91□□□□□ -0.98
CDK5RAP3-201ENST00000338399 ZNF706Q9Y5V0 76 aaPredicted RBP8.91□□□□□ -0.98
CDK5RAP3-201ENST00000338399 TRBV7-7A0A0K0K1E9 115 aa8.9□□□□□ -0.98
CDK5RAP3-201ENST00000338399 DSCR8Q96T75 97 aa8.89□□□□□ -0.99
CDK5RAP3-201ENST00000338399 LINC00483Q53H64 154 aa8.87□□□□□ -0.99
CDK5RAP3-201ENST00000338399 TRBV7-4A0A0J9YYF1 115 aa8.87□□□□□ -0.99
CDK5RAP3-201ENST00000338399 F8WEM9 126 aa8.87□□□□□ -0.99
CDK5RAP3-201ENST00000338399 ANAPC11Q9NYG5 84 aa8.87□□□□□ -0.99
CDK5RAP3-201ENST00000338399 CDK2AP2O75956 126 aa8.86□□□□□ -0.99
CDK5RAP3-201ENST00000338399 ACYP1P07311 99 aa8.86□□□□□ -0.99
CDK5RAP3-201ENST00000338399 LOC110117498A0A087WWA1 95 aa8.85□□□□□ -0.99
CDK5RAP3-201ENST00000338399 Q6ZQT0 140 aa8.85□□□□□ -0.99
CDK5RAP3-201ENST00000338399 FAT1Q14517 4588 aa8.85□□□□□ -0.99
CDK5RAP3-201ENST00000338399 CCKP06307 115 aa8.84□□□□□ -0.99
CDK5RAP3-201ENST00000338399 IMUPQ9GZP8 106 aa8.84□□□□□ -0.99
CDK5RAP3-201ENST00000338399 EPPK1P58107 5090 aaKnown RBP8.84□□□□□ -0.99
CDK5RAP3-201ENST00000338399 PDE6GP18545 87 aa8.83□□□□□ -1
CDK5RAP3-201ENST00000338399 KRTAP10-4P60372 401 aaPredicted RBP8.83□□□□□ -1
CDK5RAP3-201ENST00000338399 HSPG2P98160 4391 aa8.82□□□□□ -1
CDK5RAP3-201ENST00000338399 IGLV9-49A0A0B4J1Y8 123 aa8.82□□□□□ -1
CDK5RAP3-201ENST00000338399 IGLV8-61A0A075B6I0 122 aa8.81□□□□□ -1
CDK5RAP3-201ENST00000338399 A0A0G2JQZ4 141 aa8.81□□□□□ -1
CDK5RAP3-201ENST00000338399 SPINK6Q6UWN8 80 aa8.81□□□□□ -1
CDK5RAP3-201ENST00000338399 IGFL1Q6UW32 110 aa8.8□□□□□ -1
CDK5RAP3-201ENST00000338399 C9orf153Q5TBE3 101 aa8.79□□□□□ -1
CDK5RAP3-201ENST00000338399 FAM229AH3BQW9 127 aa8.79□□□□□ -1
CDK5RAP3-201ENST00000338399 RYR1P21817 5038 aa8.79□□□□□ -1
CDK5RAP3-201ENST00000338399 LINC00643Q86TS7 51 aa8.79□□□□□ -1
CDK5RAP3-201ENST00000338399 PLA2G1BP04054 148 aaKnown RBP8.77□□□□□ -1.01
CDK5RAP3-201ENST00000338399 KRTAP1-4P0C5Y4 121 aa8.77□□□□□ -1.01
CDK5RAP3-201ENST00000338399 FAM236AA0A1B0GUQ0 79 aa8.77□□□□□ -1.01
CDK5RAP3-201ENST00000338399 FAM236BA0A1B0GV22 79 aa8.77□□□□□ -1.01
CDK5RAP3-201ENST00000338399 A0A1W2PNM2 257 aa8.77□□□□□ -1.01
CDK5RAP3-201ENST00000338399 MOBPQ13875 183 aa8.77□□□□□ -1.01
CDK5RAP3-201ENST00000338399 Q6JHZ5 121 aa8.77□□□□□ -1.01
CDK5RAP3-201ENST00000338399 SMIM20Q8N5G0 67 aa8.77□□□□□ -1.01
CDK5RAP3-201ENST00000338399 Q5VSD8 79 aa8.75□□□□□ -1.01
CDK5RAP3-201ENST00000338399 A0A087X002 238 aa8.74□□□□□ -1.01
CDK5RAP3-201ENST00000338399 Q8NBF4 154 aa8.74□□□□□ -1.01
CDK5RAP3-201ENST00000338399 LINC00846Q9NV44 126 aa8.74□□□□□ -1.01
CDK5RAP3-201ENST00000338399 FAM229BQ4G0N7 80 aa8.73□□□□□ -1.01
CDK5RAP3-201ENST00000338399 KRTAP17-1Q9BYP8 105 aa8.72□□□□□ -1.01
CDK5RAP3-201ENST00000338399 KIAA1109Q2LD37 5005 aa8.72□□□□□ -1.01
CDK5RAP3-201ENST00000338399 KRTAP13-2Q52LG2 175 aa8.71□□□□□ -1.01
CDK5RAP3-201ENST00000338399 CRYGAP11844 174 aa8.7□□□□□ -1.02
CDK5RAP3-201ENST00000338399 PKHD1L1Q86WI1 4243 aa8.7□□□□□ -1.02
CDK5RAP3-201ENST00000338399 UQCRQO14949 82 aa8.7□□□□□ -1.02
CDK5RAP3-201ENST00000338399 HIST1H4AP62805 103 aaKnown RBP8.69□□□□□ -1.02
CDK5RAP3-201ENST00000338399 HRCT1Q6UXD1 115 aa8.68□□□□□ -1.02
CDK5RAP3-201ENST00000338399 SSBP3-AS1Q7Z2R9 100 aa8.68□□□□□ -1.02
CDK5RAP3-201ENST00000338399 Q8N1X5 172 aa8.67□□□□□ -1.02
CDK5RAP3-201ENST00000338399 A0A1B0GW54 56 aa8.66□□□□□ -1.02
CDK5RAP3-201ENST00000338399 UBL5Q9BZL1 73 aa8.66□□□□□ -1.02
CDK5RAP3-201ENST00000338399 A0A087WSZ3 146 aa8.66□□□□□ -1.02
CDK5RAP3-201ENST00000338399 COX7CP15954 63 aa8.65□□□□□ -1.02
CDK5RAP3-201ENST00000338399 PRR26Q8N8Z3 221 aa8.65□□□□□ -1.02
CDK5RAP3-201ENST00000338399 Q6ZVQ6 151 aa8.64□□□□□ -1.03
CDK5RAP3-201ENST00000338399 TYMSOSQ8TAI1 123 aa8.64□□□□□ -1.03
CDK5RAP3-201ENST00000338399 ATOX1O00244 68 aa8.63□□□□□ -1.03
CDK5RAP3-201ENST00000338399 NREPQ16612 68 aa8.62□□□□□ -1.03
CDK5RAP3-201ENST00000338399 CD164Q04900 197 aa8.59□□□□□ -1.03
CDK5RAP3-201ENST00000338399 IGKV3D-7A0A0C4DH55 119 aa8.57□□□□□ -1.04
CDK5RAP3-201ENST00000338399 J3KT08 172 aa8.57□□□□□ -1.04
CDK5RAP3-201ENST00000338399 BIRC6Q9NR09 4857 aa8.55□□□□□ -1.04
CDK5RAP3-201ENST00000338399 RPS28P62857 69 aaKnown RBP8.54□□□□□ -1.04
CDK5RAP3-201ENST00000338399 DEFB116Q30KQ4 102 aa8.54□□□□□ -1.04
CDK5RAP3-201ENST00000338399 C4orf48Q5BLP8 95 aa8.54□□□□□ -1.04
CDK5RAP3-201ENST00000338399 SERP2Q8N6R1 65 aa8.54□□□□□ -1.04
CDK5RAP3-201ENST00000338399 BPY2O14599 106 aa8.53□□□□□ -1.04
CDK5RAP3-201ENST00000338399 ATP5EP2Q5VTU8 51 aa8.53□□□□□ -1.04
CDK5RAP3-201ENST00000338399 LINC00304Q8N9R0 145 aa8.53□□□□□ -1.04
CDK5RAP3-201ENST00000338399 KRTAP4-5Q9BYR2 181 aa8.52□□□□□ -1.05
CDK5RAP3-201ENST00000338399 TMEM258P61165 79 aa8.51□□□□□ -1.05
CDK5RAP3-201ENST00000338399 LINC00472Q9H8W2 130 aa8.51□□□□□ -1.05
CDK5RAP3-201ENST00000338399 LRP1Q07954 4544 aaKnown RBP8.51□□□□□ -1.05
CDK5RAP3-201ENST00000338399 CXCL6P80162 114 aa8.51□□□□□ -1.05
CDK5RAP3-201ENST00000338399 CYSTM1Q9H1C7 97 aa8.5□□□□□ -1.05
CDK5RAP3-201ENST00000338399 SPINK1P00995 79 aa8.49□□□□□ -1.05
CDK5RAP3-201ENST00000338399 Q96NJ1 140 aa8.49□□□□□ -1.05
CDK5RAP3-201ENST00000338399 FLG2Q5D862 2391 aaPredicted RBP8.49□□□□□ -1.05
CDK5RAP3-201ENST00000338399 A0A087WVE0 104 aa8.49□□□□□ -1.05
CDK5RAP3-201ENST00000338399 FAT3Q8TDW7 4589 aa8.48□□□□□ -1.05
CDK5RAP3-201ENST00000338399 SPAG11AQ6PDA7 123 aa8.48□□□□□ -1.05
CDK5RAP3-201ENST00000338399 KRTAP10-8P60410 259 aa8.47□□□□□ -1.05
CDK5RAP3-201ENST00000338399 TNXBP22105 4242 aa8.47□□□□□ -1.05
CDK5RAP3-201ENST00000338399 DSCR10P59022 87 aa8.47□□□□□ -1.05
CDK5RAP3-201ENST00000338399 Q5XG85 94 aa8.47□□□□□ -1.05
CDK5RAP3-201ENST00000338399 Q8N9L7 120 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms