RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 C9orf92A6NGG3 77 aa11.5□□□□□ -0.57
RAB28-203ENST00000338176 RAB37Q96AX2 223 aa11.48□□□□□ -0.57
RAB28-203ENST00000338176 SEC61BP60468 96 aaKnown RBP11.47□□□□□ -0.57
RAB28-203ENST00000338176 BVES-AS1Q5T3Y7 98 aa11.47□□□□□ -0.57
RAB28-203ENST00000338176 C1orf195Q5TG92 126 aa11.47□□□□□ -0.57
RAB28-203ENST00000338176 F8WEM9 126 aa11.46□□□□□ -0.57
RAB28-203ENST00000338176 Q5XG85 94 aa11.46□□□□□ -0.58
RAB28-203ENST00000338176 LCE2AQ5TA79 106 aaPredicted RBP11.45□□□□□ -0.58
RAB28-203ENST00000338176 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.45□□□□□ -0.58
RAB28-203ENST00000338176 A0A0B4J2C4 111 aa11.44□□□□□ -0.58
RAB28-203ENST00000338176 PYY3Q5JQD4 70 aa11.44□□□□□ -0.58
RAB28-203ENST00000338176 CEND1Q8N111 149 aa11.44□□□□□ -0.58
RAB28-203ENST00000338176 FAM218AQ96MZ4 157 aa11.43□□□□□ -0.58
RAB28-203ENST00000338176 TMA7Q9Y2S6 64 aaKnown RBP11.43□□□□□ -0.58
RAB28-203ENST00000338176 IGFL1Q6UW32 110 aa11.42□□□□□ -0.58
RAB28-203ENST00000338176 FXYD2P54710 66 aa11.41□□□□□ -0.58
RAB28-203ENST00000338176 IGLV8-61A0A075B6I0 122 aa11.41□□□□□ -0.58
RAB28-203ENST00000338176 OCIAD2Q56VL3 154 aa11.41□□□□□ -0.58
RAB28-203ENST00000338176 H3BUT2 72 aa11.39□□□□□ -0.59
RAB28-203ENST00000338176 CLEC2BQ92478 149 aa11.38□□□□□ -0.59
RAB28-203ENST00000338176 Q6JHZ5 121 aa11.37□□□□□ -0.59
RAB28-203ENST00000338176 SNHG12Q9BXW3 62 aa11.37□□□□□ -0.59
RAB28-203ENST00000338176 PRO1854Q9UHT4 67 aa11.36□□□□□ -0.59
RAB28-203ENST00000338176 TCL1BO95988 128 aa11.35□□□□□ -0.59
RAB28-203ENST00000338176 PCOTHQ58A44 107 aa11.35□□□□□ -0.59
RAB28-203ENST00000338176 TRBV7-7A0A0K0K1E9 115 aa11.34□□□□□ -0.59
RAB28-203ENST00000338176 H0YGX0 51 aa11.34□□□□□ -0.59
RAB28-203ENST00000338176 PPDPFLQ8WWR9 84 aa11.34□□□□□ -0.59
RAB28-203ENST00000338176 TMEM238LA0A1B0GVL6 79 aa11.33□□□□□ -0.6
RAB28-203ENST00000338176 A6NJY4 79 aa11.33□□□□□ -0.6
RAB28-203ENST00000338176 TRIAP1O43715 76 aa11.31□□□□□ -0.6
RAB28-203ENST00000338176 K7ERJ3 54 aa11.3□□□□□ -0.6
RAB28-203ENST00000338176 HSD52Q0P140 79 aa11.28□□□□□ -0.6
RAB28-203ENST00000338176 SNCGO76070 127 aa11.26□□□□□ -0.61
RAB28-203ENST00000338176 NDUFV3P56181 108 aaKnown RBP11.26□□□□□ -0.61
RAB28-203ENST00000338176 FABP2P12104 132 aa11.23□□□□□ -0.61
RAB28-203ENST00000338176 A0A1B0GX51 115 aa11.21□□□□□ -0.61
RAB28-203ENST00000338176 UQCR10Q9UDW1 63 aa11.21□□□□□ -0.61
RAB28-203ENST00000338176 RPL37P61927 97 aaKnown RBP11.21□□□□□ -0.62
RAB28-203ENST00000338176 H3BMG7 143 aa11.2□□□□□ -0.62
RAB28-203ENST00000338176 PSMB2P49721 201 aa11.2□□□□□ -0.62
RAB28-203ENST00000338176 KRTAP19-2Q3LHN2 52 aa11.18□□□□□ -0.62
RAB28-203ENST00000338176 LCE2CQ5TA81 110 aa11.18□□□□□ -0.62
RAB28-203ENST00000338176 A0A1B0GV72 72 aa11.17□□□□□ -0.62
RAB28-203ENST00000338176 LST1O00453 97 aa11.17□□□□□ -0.62
RAB28-203ENST00000338176 Q6Q795 121 aa11.17□□□□□ -0.62
RAB28-203ENST00000338176 TEN1Q86WV5 123 aa11.16□□□□□ -0.62
RAB28-203ENST00000338176 OBSCN-AS1Q96MR7 158 aa11.15□□□□□ -0.62
RAB28-203ENST00000338176 A0A087WSZ3 146 aa11.14□□□□□ -0.63
RAB28-203ENST00000338176 KRTAP9-2Q9BYQ4 174 aa11.13□□□□□ -0.63
RAB28-203ENST00000338176 A0A1W2PNM2 257 aa11.12□□□□□ -0.63
RAB28-203ENST00000338176 DNAL4O96015 105 aa11.12□□□□□ -0.63
RAB28-203ENST00000338176 ORMDL1Q9P0S3 153 aa11.11□□□□□ -0.63
RAB28-203ENST00000338176 GHRHP01286 108 aa11.1□□□□□ -0.63
RAB28-203ENST00000338176 SS18L2Q9UHA2 77 aa11.1□□□□□ -0.63
RAB28-203ENST00000338176 COX6CP09669 75 aa11.09□□□□□ -0.63
RAB28-203ENST00000338176 Q96NJ1 140 aa11.09□□□□□ -0.63
RAB28-203ENST00000338176 ANKRD29Q8N6D5 301 aa11.05□□□□□ -0.64
RAB28-203ENST00000338176 TMEM256-PLSCR3K7ERE1 68 aa11.03□□□□□ -0.64
RAB28-203ENST00000338176 SCGB1C2P0DMR2 95 aa11.03□□□□□ -0.64
RAB28-203ENST00000338176 MT1HP80294 61 aa11.03□□□□□ -0.64
RAB28-203ENST00000338176 Q75L30 129 aa11.02□□□□□ -0.65
RAB28-203ENST00000338176 H3BQ85 93 aa10.99□□□□□ -0.65
RAB28-203ENST00000338176 TRACP01848 142 aa10.99□□□□□ -0.65
RAB28-203ENST00000338176 NAA38Q9BRA0 125 aaKnown RBP10.98□□□□□ -0.65
RAB28-203ENST00000338176 TRBV7-4A0A0J9YYF1 115 aa10.98□□□□□ -0.65
RAB28-203ENST00000338176 DSCR10P59022 87 aa10.98□□□□□ -0.65
RAB28-203ENST00000338176 UBE2V1Q13404 147 aa10.97□□□□□ -0.65
RAB28-203ENST00000338176 SIGMAR1Q99720 223 aa10.97□□□□□ -0.65
RAB28-203ENST00000338176 ATP11AUNQ6ZP68 121 aa10.96□□□□□ -0.65
RAB28-203ENST00000338176 CCKP06307 115 aa10.95□□□□□ -0.66
RAB28-203ENST00000338176 DEFB116Q30KQ4 102 aa10.95□□□□□ -0.66
RAB28-203ENST00000338176 FLGP20930 4061 aaPredicted RBP10.95□□□□□ -0.66
RAB28-203ENST00000338176 C20orf166-AS1Q96NR2 134 aa10.93□□□□□ -0.66
RAB28-203ENST00000338176 IGKV4-1P06312 121 aa10.93□□□□□ -0.66
RAB28-203ENST00000338176 A8MUU9 505 aa10.91□□□□□ -0.66
RAB28-203ENST00000338176 BAALC-AS2P0C853 105 aa10.9□□□□□ -0.66
RAB28-203ENST00000338176 SMIM6P0DI80 62 aa10.9□□□□□ -0.66
RAB28-203ENST00000338176 VPS25Q9BRG1 176 aa10.9□□□□□ -0.66
RAB28-203ENST00000338176 M0R143 59 aa10.9□□□□□ -0.67
RAB28-203ENST00000338176 COX6B2Q6YFQ2 88 aa10.9□□□□□ -0.67
RAB28-203ENST00000338176 LINC00472Q9H8W2 130 aa10.89□□□□□ -0.67
RAB28-203ENST00000338176 RBM3P98179 157 aaKnown RBP10.88□□□□□ -0.67
RAB28-203ENST00000338176 NOTCH2NLQ7Z3S9 236 aa10.88□□□□□ -0.67
RAB28-203ENST00000338176 LINC00313P59037 77 aa10.85□□□□□ -0.67
RAB28-203ENST00000338176 KRTAP16-1A8MUX0 517 aa10.84□□□□□ -0.67
RAB28-203ENST00000338176 DSCR8Q96T75 97 aa10.84□□□□□ -0.67
RAB28-203ENST00000338176 ATXN8Q156A1 80 aa10.82□□□□□ -0.68
RAB28-203ENST00000338176 IGHV6-1A0A0B4J1U7 121 aa10.8□□□□□ -0.68
RAB28-203ENST00000338176 M0R2T5 61 aa10.8□□□□□ -0.68
RAB28-203ENST00000338176 KRTAP10-6P60371 365 aaPredicted RBP10.8□□□□□ -0.68
RAB28-203ENST00000338176 BATFQ16520 125 aa10.79□□□□□ -0.68
RAB28-203ENST00000338176 C9JAW5 83 aa10.78□□□□□ -0.68
RAB28-203ENST00000338176 LORP23490 312 aaPredicted RBP10.78□□□□□ -0.68
RAB28-203ENST00000338176 LCE2DQ5TA82 110 aaPredicted RBP10.78□□□□□ -0.68
RAB28-203ENST00000338176 LOC105371267A0A1B0GV96 52 aa10.77□□□□□ -0.68
RAB28-203ENST00000338176 TSTD3H0UI37 97 aa10.75□□□□□ -0.69
RAB28-203ENST00000338176 KRTAP9-6A0A140TA67 174 aa10.72□□□□□ -0.69
RAB28-203ENST00000338176 Q6ZQT0 140 aa10.72□□□□□ -0.69
RAB28-203ENST00000338176 A0A1B0GVX0 72 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms