RNA–Protein interactions for RNA: ENST00000337304.2

ATF4-201, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-201ENST00000337304 C1orf137Q5JT78 98 aa15.95■□□□□ 0.14
ATF4-201ENST00000337304 SMIM29Q86T20 159 aa15.94■□□□□ 0.14
ATF4-201ENST00000337304 PDE6GP18545 87 aa15.93■□□□□ 0.14
ATF4-201ENST00000337304 HAMPP81172 84 aa15.92■□□□□ 0.14
ATF4-201ENST00000337304 A0A1B0GVY2 172 aa15.92■□□□□ 0.14
ATF4-201ENST00000337304 SRRM2Q9UQ35 2752 aaKnown RBP15.91■□□□□ 0.14
ATF4-201ENST00000337304 PKHD1P08F94 4074 aa15.89■□□□□ 0.13
ATF4-201ENST00000337304 LINC00846Q9NV44 126 aa15.88■□□□□ 0.13
ATF4-201ENST00000337304 SPRR1BP22528 89 aa15.87■□□□□ 0.13
ATF4-201ENST00000337304 ZNF861PO60384 105 aa15.85■□□□□ 0.13
ATF4-201ENST00000337304 SS18L2Q9UHA2 77 aa15.85■□□□□ 0.13
ATF4-201ENST00000337304 IGLV7-43P04211 117 aa15.82■□□□□ 0.12
ATF4-201ENST00000337304 F8WEM9 126 aa15.8■□□□□ 0.12
ATF4-201ENST00000337304 SPRR4Q96PI1 79 aa15.79■□□□□ 0.12
ATF4-201ENST00000337304 LRP1BQ9NZR2 4599 aa15.79■□□□□ 0.12
ATF4-201ENST00000337304 LINC00643Q86TS7 51 aa15.77■□□□□ 0.12
ATF4-201ENST00000337304 IGLV8-61A0A075B6I0 122 aa15.75■□□□□ 0.11
ATF4-201ENST00000337304 ZNF706Q9Y5V0 76 aaPredicted RBP15.74■□□□□ 0.11
ATF4-201ENST00000337304 LINC00483Q53H64 154 aa15.73■□□□□ 0.11
ATF4-201ENST00000337304 DYNC1H1Q14204 4646 aaKnown RBP15.73■□□□□ 0.11
ATF4-201ENST00000337304 A0A1W2PNM2 257 aa15.72■□□□□ 0.11
ATF4-201ENST00000337304 IGFL1Q6UW32 110 aa15.7■□□□□ 0.1
ATF4-201ENST00000337304 CCDC179H3BU77 68 aa15.7■□□□□ 0.1
ATF4-201ENST00000337304 TRBV7-7A0A0K0K1E9 115 aa15.69■□□□□ 0.1
ATF4-201ENST00000337304 UBL5Q9BZL1 73 aa15.69■□□□□ 0.1
ATF4-201ENST00000337304 IMUPQ9GZP8 106 aa15.69■□□□□ 0.1
ATF4-201ENST00000337304 A0A0G2JQZ4 141 aa15.68■□□□□ 0.1
ATF4-201ENST00000337304 Q8NBF4 154 aa15.68■□□□□ 0.1
ATF4-201ENST00000337304 Q6JHZ5 121 aa15.64■□□□□ 0.09
ATF4-201ENST00000337304 Q6ZVQ6 151 aa15.64■□□□□ 0.09
ATF4-201ENST00000337304 ANAPC11Q9NYG5 84 aa15.62■□□□□ 0.09
ATF4-201ENST00000337304 VPS13BQ7Z7G8 4022 aa15.62■□□□□ 0.09
ATF4-201ENST00000337304 A0A1B0GW54 56 aa15.61■□□□□ 0.09
ATF4-201ENST00000337304 RYR3Q15413 4870 aa15.6■□□□□ 0.09
ATF4-201ENST00000337304 IGLV9-49A0A0B4J1Y8 123 aa15.6■□□□□ 0.09
ATF4-201ENST00000337304 IGKV3D-7A0A0C4DH55 119 aa15.6■□□□□ 0.09
ATF4-201ENST00000337304 CRYGAP11844 174 aa15.59■□□□□ 0.09
ATF4-201ENST00000337304 SMIM20Q8N5G0 67 aa15.57■□□□□ 0.08
ATF4-201ENST00000337304 APOBP04114 4563 aaKnown RBP15.56■□□□□ 0.08
ATF4-201ENST00000337304 C9orf153Q5TBE3 101 aa15.56■□□□□ 0.08
ATF4-201ENST00000337304 ATP5EP2Q5VTU8 51 aa15.54■□□□□ 0.08
ATF4-201ENST00000337304 NREPQ16612 68 aa15.52■□□□□ 0.08
ATF4-201ENST00000337304 RPL37AP61513 92 aaKnown RBP15.51■□□□□ 0.07
ATF4-201ENST00000337304 SMR3BP02814 79 aaPredicted RBP15.51■□□□□ 0.07
ATF4-201ENST00000337304 MOBPQ13875 183 aa15.5■□□□□ 0.07
ATF4-201ENST00000337304 A0A087WSZ3 146 aa15.46■□□□□ 0.07
ATF4-201ENST00000337304 CXCL6P80162 114 aa15.44■□□□□ 0.06
ATF4-201ENST00000337304 UQCRQO14949 82 aa15.43■□□□□ 0.06
ATF4-201ENST00000337304 FAM236AA0A1B0GUQ0 79 aa15.41■□□□□ 0.06
ATF4-201ENST00000337304 FAM236BA0A1B0GV22 79 aa15.41■□□□□ 0.06
ATF4-201ENST00000337304 KRTAP1-4P0C5Y4 121 aa15.39■□□□□ 0.05
ATF4-201ENST00000337304 HIST1H4AP62805 103 aaKnown RBP15.39■□□□□ 0.05
ATF4-201ENST00000337304 A0A087WVE0 104 aa15.38■□□□□ 0.05
ATF4-201ENST00000337304 A0A087X002 238 aa15.38■□□□□ 0.05
ATF4-201ENST00000337304 FAM229BQ4G0N7 80 aa15.38■□□□□ 0.05
ATF4-201ENST00000337304 BPY2O14599 106 aa15.37■□□□□ 0.05
ATF4-201ENST00000337304 SPINK6Q6UWN8 80 aa15.37■□□□□ 0.05
ATF4-201ENST00000337304 KRTAP10-4P60372 401 aaPredicted RBP15.36■□□□□ 0.05
ATF4-201ENST00000337304 HRCT1Q6UXD1 115 aa15.35■□□□□ 0.05
ATF4-201ENST00000337304 KRTAP13-2Q52LG2 175 aa15.34■□□□□ 0.05
ATF4-201ENST00000337304 SSBP3-AS1Q7Z2R9 100 aa15.33■□□□□ 0.04
ATF4-201ENST00000337304 FAT1Q14517 4588 aa15.33■□□□□ 0.04
ATF4-201ENST00000337304 COX7CP15954 63 aa15.29■□□□□ 0.04
ATF4-201ENST00000337304 Q8N9L7 120 aa15.28■□□□□ 0.04
ATF4-201ENST00000337304 ATOX1O00244 68 aa15.27■□□□□ 0.04
ATF4-201ENST00000337304 RPS28P62857 69 aaKnown RBP15.27■□□□□ 0.04
ATF4-201ENST00000337304 PLA2G1BP04054 148 aaKnown RBP15.27■□□□□ 0.03
ATF4-201ENST00000337304 DEFB116Q30KQ4 102 aa15.26■□□□□ 0.03
ATF4-201ENST00000337304 DSCR10P59022 87 aa15.25■□□□□ 0.03
ATF4-201ENST00000337304 IGKV4-1P06312 121 aa15.24■□□□□ 0.03
ATF4-201ENST00000337304 J3KT08 172 aa15.24■□□□□ 0.03
ATF4-201ENST00000337304 CDK2AP2O75956 126 aa15.24■□□□□ 0.03
ATF4-201ENST00000337304 LINC00472Q9H8W2 130 aa15.24■□□□□ 0.03
ATF4-201ENST00000337304 CD164Q04900 197 aa15.22■□□□□ 0.03
ATF4-201ENST00000337304 HSPG2P98160 4391 aa15.19■□□□□ 0.02
ATF4-201ENST00000337304 Q96NJ1 140 aa15.17■□□□□ 0.02
ATF4-201ENST00000337304 FAM229AH3BQW9 127 aa15.16■□□□□ 0.02
ATF4-201ENST00000337304 K7EQZ3 153 aa15.16■□□□□ 0.02
ATF4-201ENST00000337304 C5orf47Q569G3 176 aa15.14■□□□□ 0.01
ATF4-201ENST00000337304 TYMSOSQ8TAI1 123 aa15.13■□□□□ 0.01
ATF4-201ENST00000337304 TMEM258P61165 79 aa15.11■□□□□ 0.01
ATF4-201ENST00000337304 PRR26Q8N8Z3 221 aa15.11■□□□□ 0.01
ATF4-201ENST00000337304 PKHD1L1Q86WI1 4243 aa15.11■□□□□ 0.01
ATF4-201ENST00000337304 RYR1P21817 5038 aa15.08■□□□□ 0
ATF4-201ENST00000337304 Q5VSD8 79 aa15.08■□□□□ 0
ATF4-201ENST00000337304 SERP2Q8N6R1 65 aa15.08■□□□□ 0
ATF4-201ENST00000337304 A8MWP4 228 aa15.06■□□□□ 0
ATF4-201ENST00000337304 EPPK1P58107 5090 aaKnown RBP15.04■□□□□ -0
ATF4-201ENST00000337304 PRR15Q8IV56 129 aa15.02■□□□□ -0
ATF4-201ENST00000337304 ASB16-AS1Q495Z4 193 aa15.02□□□□□ -0.01
ATF4-201ENST00000337304 KRTAP17-1Q9BYP8 105 aa15.01□□□□□ -0.01
ATF4-201ENST00000337304 Q5XG85 94 aa15□□□□□ -0.01
ATF4-201ENST00000337304 C4orf48Q5BLP8 95 aa14.98□□□□□ -0.01
ATF4-201ENST00000337304 HCG22E2RYF7 251 aa14.95□□□□□ -0.02
ATF4-201ENST00000337304 NDUFB1O75438 58 aa14.95□□□□□ -0.02
ATF4-201ENST00000337304 LINC00304Q8N9R0 145 aa14.95□□□□□ -0.02
ATF4-201ENST00000337304 KIAA1109Q2LD37 5005 aa14.95□□□□□ -0.02
ATF4-201ENST00000337304 SPINK1P00995 79 aa14.94□□□□□ -0.02
ATF4-201ENST00000337304 LIMD2Q9BT23 127 aa14.93□□□□□ -0.02
ATF4-201ENST00000337304 C1orf195Q5TG92 126 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms