RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 KRTAP25-1Q3LHN0 102 aa7.82□□□□□ -1.16
HLCS-201ENST00000336648 EPG5Q9HCE0 2579 aa7.8□□□□□ -1.16
HLCS-201ENST00000336648 USP24Q9UPU5 2620 aa7.8□□□□□ -1.16
HLCS-201ENST00000336648 SRCAPQ6ZRS2 3230 aa7.79□□□□□ -1.16
HLCS-201ENST00000336648 SPATA8Q6RVD6 105 aa7.79□□□□□ -1.16
HLCS-201ENST00000336648 C20orf166-AS1Q96NR2 134 aa7.78□□□□□ -1.16
HLCS-201ENST00000336648 UTRNP46939 3433 aa7.78□□□□□ -1.16
HLCS-201ENST00000336648 GOLGB1Q14789 3259 aaKnown RBP7.78□□□□□ -1.16
HLCS-201ENST00000336648 ADM2Q7Z4H4 148 aa7.76□□□□□ -1.17
HLCS-201ENST00000336648 Q5VSD8 79 aa7.75□□□□□ -1.17
HLCS-201ENST00000336648 A6NN06 94 aa7.74□□□□□ -1.17
HLCS-201ENST00000336648 NDUFAF8A1L188 74 aa7.73□□□□□ -1.17
HLCS-201ENST00000336648 KRTAP1-5Q9BYS1 174 aa7.72□□□□□ -1.17
HLCS-201ENST00000336648 KRTAP29-1A8MX34 341 aaPredicted RBP7.72□□□□□ -1.17
HLCS-201ENST00000336648 LCE6AA0A183 80 aa7.72□□□□□ -1.17
HLCS-201ENST00000336648 KRTAP4-16G5E9R7 235 aaPredicted RBP7.71□□□□□ -1.18
HLCS-201ENST00000336648 HECTD1Q9ULT8 2610 aa7.7□□□□□ -1.18
HLCS-201ENST00000336648 KRTAP10-1P60331 282 aa7.69□□□□□ -1.18
HLCS-201ENST00000336648 FLNBO75369 2602 aaKnown RBP7.68□□□□□ -1.18
HLCS-201ENST00000336648 RPS29P62273 56 aaKnown RBP7.67□□□□□ -1.18
HLCS-201ENST00000336648 PANO1I0J062 215 aa7.65□□□□□ -1.18
HLCS-201ENST00000336648 FLNAP21333 2647 aaKnown RBP7.61□□□□□ -1.19
HLCS-201ENST00000336648 KRTAP10-2P60368 255 aa7.61□□□□□ -1.19
HLCS-201ENST00000336648 CENPFP49454 3210 aa7.61□□□□□ -1.19
HLCS-201ENST00000336648 ATRQ13535 2644 aa7.55□□□□□ -1.2
HLCS-201ENST00000336648 A8MU10 97 aa7.54□□□□□ -1.2
HLCS-201ENST00000336648 ITPR3Q14573 2671 aa7.54□□□□□ -1.2
HLCS-201ENST00000336648 FLG2Q5D862 2391 aaPredicted RBP7.53□□□□□ -1.2
HLCS-201ENST00000336648 MAST4O15021 2626 aa7.52□□□□□ -1.21
HLCS-201ENST00000336648 STAB1Q9NY15 2570 aa7.51□□□□□ -1.21
HLCS-201ENST00000336648 A0A087X002 238 aa7.5□□□□□ -1.21
HLCS-201ENST00000336648 C10orf95Q9H7T3 257 aa7.49□□□□□ -1.21
HLCS-201ENST00000336648 BPTFQ12830 3046 aa7.47□□□□□ -1.21
HLCS-201ENST00000336648 HELZ2Q9BYK8 2649 aaKnown RBP7.46□□□□□ -1.22
HLCS-201ENST00000336648 A8MUU9 505 aa7.46□□□□□ -1.22
HLCS-201ENST00000336648 NOTCH2NLQ7Z3S9 236 aa7.45□□□□□ -1.22
HLCS-201ENST00000336648 TNP1P09430 55 aa7.42□□□□□ -1.22
HLCS-201ENST00000336648 DMBT1Q9UGM3 2413 aaPredicted RBP7.38□□□□□ -1.23
HLCS-201ENST00000336648 Q6ZRN7 208 aaPredicted RBP7.37□□□□□ -1.23
HLCS-201ENST00000336648 KRTAP11-1Q8IUC1 163 aa7.36□□□□□ -1.23
HLCS-201ENST00000336648 NBEAL1Q6ZS30 2694 aa7.36□□□□□ -1.23
HLCS-201ENST00000336648 KRTAP13-1Q8IUC0 172 aa7.35□□□□□ -1.23
HLCS-201ENST00000336648 PP632Q6XCG6 107 aa7.31□□□□□ -1.24
HLCS-201ENST00000336648 PRRC2CQ9Y520 2896 aaKnown RBP7.3□□□□□ -1.24
HLCS-201ENST00000336648 KRTAP13-2Q52LG2 175 aa7.29□□□□□ -1.24
HLCS-201ENST00000336648 PCNTO95613 3336 aa7.29□□□□□ -1.24
HLCS-201ENST00000336648 KRTAP7-1Q8IUC3 87 aa7.28□□□□□ -1.24
HLCS-201ENST00000336648 CFAP46Q8IYW2 2715 aa7.27□□□□□ -1.25
HLCS-201ENST00000336648 DNAH12Q6ZR08 3092 aa7.24□□□□□ -1.25
HLCS-201ENST00000336648 AKAP13Q12802 2813 aa7.16□□□□□ -1.26
HLCS-201ENST00000336648 CEP350Q5VT06 3117 aa7.16□□□□□ -1.26
HLCS-201ENST00000336648 BRCA2P51587 3418 aa7.16□□□□□ -1.26
HLCS-201ENST00000336648 CHD6Q8TD26 2715 aa7.15□□□□□ -1.26
HLCS-201ENST00000336648 CENPEQ02224 2701 aa7.14□□□□□ -1.27
HLCS-201ENST00000336648 UNC79Q9P2D8 2635 aa7.14□□□□□ -1.27
HLCS-201ENST00000336648 TEP1Q99973 2627 aaKnown RBP7.14□□□□□ -1.27
HLCS-201ENST00000336648 P0C880 135 aa7.13□□□□□ -1.27
HLCS-201ENST00000336648 TEX15Q9BXT5 2789 aa7.12□□□□□ -1.27
HLCS-201ENST00000336648 STAB2Q8WWQ8 2551 aa7.12□□□□□ -1.27
HLCS-201ENST00000336648 KRTAP21-3Q3LHN1 58 aa7.11□□□□□ -1.27
HLCS-201ENST00000336648 NOTCH1P46531 2555 aa7.08□□□□□ -1.28
HLCS-201ENST00000336648 HTTP42858 3142 aa7.07□□□□□ -1.28
HLCS-201ENST00000336648 COL6A5A8TX70 2615 aa7.07□□□□□ -1.28
HLCS-201ENST00000336648 GCN1Q92616 2671 aaKnown RBP7.07□□□□□ -1.28
HLCS-201ENST00000336648 KRTAP10-8P60410 259 aa7□□□□□ -1.29
HLCS-201ENST00000336648 NSD1Q96L73 2696 aaPredicted RBP6.97□□□□□ -1.29
HLCS-201ENST00000336648 SETXQ7Z333 2677 aaKnown RBP6.97□□□□□ -1.29
HLCS-201ENST00000336648 MKI67P46013 3256 aaKnown RBP6.95□□□□□ -1.3
HLCS-201ENST00000336648 XP32Q5T750 250 aa6.95□□□□□ -1.3
HLCS-201ENST00000336648 H0YAA0 97 aa6.94□□□□□ -1.3
HLCS-201ENST00000336648 KRTAP1-4P0C5Y4 121 aa6.91□□□□□ -1.3
HLCS-201ENST00000336648 MAP1AP78559 2803 aaPredicted RBP6.9□□□□□ -1.3
HLCS-201ENST00000336648 TPRXLQ17RH7 258 aa6.9□□□□□ -1.31
HLCS-201ENST00000336648 PRO2289Q9P1D8 64 aa6.86□□□□□ -1.31
HLCS-201ENST00000336648 TNRC18O15417 2968 aaPredicted RBP6.85□□□□□ -1.31
HLCS-201ENST00000336648 CHD7Q9P2D1 2997 aa6.85□□□□□ -1.31
HLCS-201ENST00000336648 KMT2BQ9UMN6 2715 aaPredicted RBP6.85□□□□□ -1.31
HLCS-201ENST00000336648 ZNF292O60281 2723 aa6.85□□□□□ -1.31
HLCS-201ENST00000336648 C5orf42Q9H799 3197 aa6.85□□□□□ -1.31
HLCS-201ENST00000336648 NBEAL2Q6ZNJ1 2754 aa6.84□□□□□ -1.31
HLCS-201ENST00000336648 LAMA2P24043 3122 aaKnown RBP6.82□□□□□ -1.32
HLCS-201ENST00000336648 UBR5O95071 2799 aaPredicted RBP6.78□□□□□ -1.32
HLCS-201ENST00000336648 A0A0C4DFX4 3053 aa6.78□□□□□ -1.32
HLCS-201ENST00000336648 CHD9Q3L8U1 2897 aa6.77□□□□□ -1.33
HLCS-201ENST00000336648 ITPR2Q14571 2701 aa6.76□□□□□ -1.33
HLCS-201ENST00000336648 REV3LO60673 3130 aa6.76□□□□□ -1.33
HLCS-201ENST00000336648 BAHCC1Q9P281 2608 aa6.75□□□□□ -1.33
HLCS-201ENST00000336648 CDH23Q9H251 3354 aa6.75□□□□□ -1.33
HLCS-201ENST00000336648 EYSQ5T1H1 3165 aa6.75□□□□□ -1.33
HLCS-201ENST00000336648 A0A1B0GVY2 172 aa6.74□□□□□ -1.33
HLCS-201ENST00000336648 SPTBN5Q9NRC6 3674 aaKnown RBP6.73□□□□□ -1.33
HLCS-201ENST00000336648 LAMA3Q16787 3333 aa6.73□□□□□ -1.33
HLCS-201ENST00000336648 IGSF10Q6WRI0 2623 aa6.73□□□□□ -1.33
HLCS-201ENST00000336648 KRTAP10-10P60014 251 aa6.72□□□□□ -1.33
HLCS-201ENST00000336648 KRTAP13-3Q3SY46 172 aa6.7□□□□□ -1.34
HLCS-201ENST00000336648 SZT2Q5T011 3432 aa6.69□□□□□ -1.34
HLCS-201ENST00000336648 MGAQ8IWI9 3026 aa6.68□□□□□ -1.34
HLCS-201ENST00000336648 XIRP2A4UGR9 3374 aa6.67□□□□□ -1.34
HLCS-201ENST00000336648 TRANK1O15050 2925 aa6.67□□□□□ -1.34
HLCS-201ENST00000336648 RANBP2P49792 3224 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms