RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 COPS9Q8WXC6 57 aa12.93□□□□□ -0.34
CDKN3-202ENST00000335183 HSBP1L1C9JCN9 74 aa12.91□□□□□ -0.34
CDKN3-202ENST00000335183 TCL1BO95988 128 aa12.91□□□□□ -0.34
CDKN3-202ENST00000335183 IFITM1P13164 125 aa12.9□□□□□ -0.34
CDKN3-202ENST00000335183 Q6ZVH6 145 aa12.9□□□□□ -0.34
CDKN3-202ENST00000335183 A4D1N5 150 aa12.88□□□□□ -0.35
CDKN3-202ENST00000335183 SCGB1D1O95968 90 aa12.88□□□□□ -0.35
CDKN3-202ENST00000335183 MUSTN1Q8IVN3 82 aa12.88□□□□□ -0.35
CDKN3-202ENST00000335183 NHP2Q9NX24 153 aaKnown RBP12.88□□□□□ -0.35
CDKN3-202ENST00000335183 PYY3Q5JQD4 70 aa12.87□□□□□ -0.35
CDKN3-202ENST00000335183 FLGP20930 4061 aaPredicted RBP12.87□□□□□ -0.35
CDKN3-202ENST00000335183 F8WEM9 126 aa12.84□□□□□ -0.35
CDKN3-202ENST00000335183 SMIM11BQ8TCY0 68 aa12.84□□□□□ -0.35
CDKN3-202ENST00000335183 TRAV13-2A0A0B4J235 113 aa12.82□□□□□ -0.36
CDKN3-202ENST00000335183 TSTD3H0UI37 97 aa12.81□□□□□ -0.36
CDKN3-202ENST00000335183 Q6Q795 121 aa12.78□□□□□ -0.36
CDKN3-202ENST00000335183 COX8AP10176 69 aa12.74□□□□□ -0.37
CDKN3-202ENST00000335183 VAMP3Q15836 100 aa12.74□□□□□ -0.37
CDKN3-202ENST00000335183 TRBV7-7A0A0K0K1E9 115 aa12.72□□□□□ -0.37
CDKN3-202ENST00000335183 Q6JHZ5 121 aa12.72□□□□□ -0.37
CDKN3-202ENST00000335183 ATP11AUNQ6ZP68 121 aa12.72□□□□□ -0.37
CDKN3-202ENST00000335183 Q6ZQY7 126 aa12.72□□□□□ -0.37
CDKN3-202ENST00000335183 CLEC2BQ92478 149 aa12.72□□□□□ -0.37
CDKN3-202ENST00000335183 OBSCN-AS1Q96MR7 158 aa12.72□□□□□ -0.37
CDKN3-202ENST00000335183 DLEU1O43261 78 aa12.71□□□□□ -0.37
CDKN3-202ENST00000335183 LINC00575Q6W349 94 aa12.71□□□□□ -0.37
CDKN3-202ENST00000335183 IGFL1Q6UW32 110 aa12.7□□□□□ -0.38
CDKN3-202ENST00000335183 hADV29S1A0JD25 119 aa12.68□□□□□ -0.38
CDKN3-202ENST00000335183 PAM16Q9Y3D7 125 aa12.68□□□□□ -0.38
CDKN3-202ENST00000335183 SPATA45Q537H7 98 aa12.67□□□□□ -0.38
CDKN3-202ENST00000335183 Q75L30 129 aa12.67□□□□□ -0.38
CDKN3-202ENST00000335183 VAMP8Q9BV40 100 aa12.67□□□□□ -0.38
CDKN3-202ENST00000335183 OCIAD2Q56VL3 154 aa12.65□□□□□ -0.38
CDKN3-202ENST00000335183 C14orf144Q96I85 54 aa12.64□□□□□ -0.39
CDKN3-202ENST00000335183 HIST1H4GQ99525 98 aa12.63□□□□□ -0.39
CDKN3-202ENST00000335183 HIGD1BQ9P298 99 aa12.61□□□□□ -0.39
CDKN3-202ENST00000335183 LST1O00453 97 aa12.59□□□□□ -0.39
CDKN3-202ENST00000335183 Q96NJ1 140 aa12.59□□□□□ -0.39
CDKN3-202ENST00000335183 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.57□□□□□ -0.4
CDKN3-202ENST00000335183 SNHG12Q9BXW3 62 aa12.56□□□□□ -0.4
CDKN3-202ENST00000335183 H3BUT2 72 aa12.55□□□□□ -0.4
CDKN3-202ENST00000335183 C2orf91Q6ZV80 131 aa12.55□□□□□ -0.4
CDKN3-202ENST00000335183 PPDPFLQ8WWR9 84 aa12.52□□□□□ -0.41
CDKN3-202ENST00000335183 BVES-AS1Q5T3Y7 98 aa12.5□□□□□ -0.41
CDKN3-202ENST00000335183 CFC1P0CG37 223 aa12.49□□□□□ -0.41
CDKN3-202ENST00000335183 SS18L2Q9UHA2 77 aa12.48□□□□□ -0.41
CDKN3-202ENST00000335183 M0R143 59 aa12.47□□□□□ -0.41
CDKN3-202ENST00000335183 C20orf166-AS1Q96NR2 134 aa12.46□□□□□ -0.41
CDKN3-202ENST00000335183 KRTAP9-8Q9BYQ0 159 aa12.46□□□□□ -0.41
CDKN3-202ENST00000335183 TRBV20-1A0A075B6N2 111 aa12.45□□□□□ -0.42
CDKN3-202ENST00000335183 CEND1Q8N111 149 aa12.45□□□□□ -0.42
CDKN3-202ENST00000335183 A0A0B4J2C4 111 aa12.44□□□□□ -0.42
CDKN3-202ENST00000335183 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.44□□□□□ -0.42
CDKN3-202ENST00000335183 RAB37Q96AX2 223 aa12.44□□□□□ -0.42
CDKN3-202ENST00000335183 A8MUU9 505 aa12.43□□□□□ -0.42
CDKN3-202ENST00000335183 UQCR10Q9UDW1 63 aa12.43□□□□□ -0.42
CDKN3-202ENST00000335183 KRTAP9-7A8MTY7 169 aa12.42□□□□□ -0.42
CDKN3-202ENST00000335183 TMEM238LA0A1B0GVL6 79 aa12.41□□□□□ -0.42
CDKN3-202ENST00000335183 A6NJY4 79 aa12.41□□□□□ -0.42
CDKN3-202ENST00000335183 TEN1Q86WV5 123 aa12.39□□□□□ -0.43
CDKN3-202ENST00000335183 A0A087WSZ3 146 aa12.37□□□□□ -0.43
CDKN3-202ENST00000335183 FXYD2P54710 66 aa12.37□□□□□ -0.43
CDKN3-202ENST00000335183 HSD52Q0P140 79 aa12.37□□□□□ -0.43
CDKN3-202ENST00000335183 USH2AO75445 5202 aa12.36□□□□□ -0.43
CDKN3-202ENST00000335183 NDUFV3P56181 108 aaKnown RBP12.35□□□□□ -0.43
CDKN3-202ENST00000335183 DSCR10P59022 87 aa12.35□□□□□ -0.43
CDKN3-202ENST00000335183 PRO1854Q9UHT4 67 aa12.34□□□□□ -0.43
CDKN3-202ENST00000335183 SNCGO76070 127 aa12.33□□□□□ -0.44
CDKN3-202ENST00000335183 A0A1B0GV90 55 aa12.32□□□□□ -0.44
CDKN3-202ENST00000335183 SSPOA2VEC9 5147 aa12.32□□□□□ -0.44
CDKN3-202ENST00000335183 H0YGX0 51 aa12.31□□□□□ -0.44
CDKN3-202ENST00000335183 FAM236DA0A1B0GTK5 79 aa12.3□□□□□ -0.44
CDKN3-202ENST00000335183 FAM236CP0DP71 79 aa12.3□□□□□ -0.44
CDKN3-202ENST00000335183 COL5A1-AS1Q5SY13 56 aa12.3□□□□□ -0.44
CDKN3-202ENST00000335183 FAM218AQ96MZ4 157 aa12.29□□□□□ -0.44
CDKN3-202ENST00000335183 SIGMAR1Q99720 223 aa12.29□□□□□ -0.44
CDKN3-202ENST00000335183 H3BMG7 143 aa12.27□□□□□ -0.45
CDKN3-202ENST00000335183 MT2AP02795 61 aa12.26□□□□□ -0.45
CDKN3-202ENST00000335183 KRTAP16-1A8MUX0 517 aa12.24□□□□□ -0.45
CDKN3-202ENST00000335183 FABP2P12104 132 aa12.23□□□□□ -0.45
CDKN3-202ENST00000335183 A0A1B0GX51 115 aa12.22□□□□□ -0.45
CDKN3-202ENST00000335183 LINC00313P59037 77 aa12.22□□□□□ -0.45
CDKN3-202ENST00000335183 A0A1W2PNM2 257 aa12.2□□□□□ -0.46
CDKN3-202ENST00000335183 K7ERJ3 54 aa12.2□□□□□ -0.46
CDKN3-202ENST00000335183 TRIAP1O43715 76 aa12.2□□□□□ -0.46
CDKN3-202ENST00000335183 GHRHP01286 108 aa12.19□□□□□ -0.46
CDKN3-202ENST00000335183 IGKV4-1P06312 121 aa12.18□□□□□ -0.46
CDKN3-202ENST00000335183 RBM12B-AS1Q9P1G2 102 aa12.18□□□□□ -0.46
CDKN3-202ENST00000335183 MT1FP04733 61 aa12.17□□□□□ -0.46
CDKN3-202ENST00000335183 LCE2BO14633 110 aa12.14□□□□□ -0.47
CDKN3-202ENST00000335183 HRES1P13985 223 aa12.14□□□□□ -0.47
CDKN3-202ENST00000335183 PSMB2P49721 201 aa12.14□□□□□ -0.47
CDKN3-202ENST00000335183 BATFQ16520 125 aa12.14□□□□□ -0.47
CDKN3-202ENST00000335183 COX6CP09669 75 aa12.13□□□□□ -0.47
CDKN3-202ENST00000335183 KRTAP10-10P60014 251 aa12.12□□□□□ -0.47
CDKN3-202ENST00000335183 KRTAP19-1Q8IUB9 90 aa12.12□□□□□ -0.47
CDKN3-202ENST00000335183 FCGBPQ9Y6R7 5405 aaPredicted RBP12.11□□□□□ -0.47
CDKN3-202ENST00000335183 NOTCH2NLQ7Z3S9 236 aa12.11□□□□□ -0.47
CDKN3-202ENST00000335183 MPLKIPQ8TAP9 179 aa12.11□□□□□ -0.47
CDKN3-202ENST00000335183 A0A1B0GV72 72 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms