RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 C3orf22Q8N5N4 141 aa12.48□□□□□ -0.41
SUMO3-201ENST00000332859 PRLHP81277 87 aa12.47□□□□□ -0.41
SUMO3-201ENST00000332859 H0Y9J4 135 aa12.46□□□□□ -0.41
SUMO3-201ENST00000332859 COX7CP15954 63 aa12.46□□□□□ -0.41
SUMO3-201ENST00000332859 FAT2Q9NYQ8 4349 aa12.46□□□□□ -0.41
SUMO3-201ENST00000332859 BCE1O60756 84 aa12.46□□□□□ -0.42
SUMO3-201ENST00000332859 KRTAP10-1P60331 282 aa12.44□□□□□ -0.42
SUMO3-201ENST00000332859 UBE2AP49459 152 aa12.44□□□□□ -0.42
SUMO3-201ENST00000332859 C1orf137Q5JT78 98 aa12.44□□□□□ -0.42
SUMO3-201ENST00000332859 Q6ZSA8 131 aa12.43□□□□□ -0.42
SUMO3-201ENST00000332859 FAM30AQ9NZY2 134 aa12.43□□□□□ -0.42
SUMO3-201ENST00000332859 SERP2Q8N6R1 65 aa12.41□□□□□ -0.42
SUMO3-201ENST00000332859 HIGD2AQ9BW72 106 aa12.41□□□□□ -0.42
SUMO3-201ENST00000332859 DNAH5Q8TE73 4624 aa12.41□□□□□ -0.42
SUMO3-201ENST00000332859 NREPQ16612 68 aa12.41□□□□□ -0.42
SUMO3-201ENST00000332859 SMIM29Q86T20 159 aa12.41□□□□□ -0.42
SUMO3-201ENST00000332859 F8WEM9 126 aa12.4□□□□□ -0.42
SUMO3-201ENST00000332859 PKD1P98161 4303 aa12.4□□□□□ -0.42
SUMO3-201ENST00000332859 Q8NBF4 154 aa12.39□□□□□ -0.43
SUMO3-201ENST00000332859 CIRBP-AS1Q8TBR5 109 aa12.39□□□□□ -0.43
SUMO3-201ENST00000332859 RYR2Q92736 4967 aa12.39□□□□□ -0.43
SUMO3-201ENST00000332859 A0A1W2PNM2 257 aa12.39□□□□□ -0.43
SUMO3-201ENST00000332859 C9orf153Q5TBE3 101 aa12.39□□□□□ -0.43
SUMO3-201ENST00000332859 PSORS1C2Q9UIG4 136 aa12.38□□□□□ -0.43
SUMO3-201ENST00000332859 SCXQ7RTU7 201 aa12.37□□□□□ -0.43
SUMO3-201ENST00000332859 KRTAP13-1Q8IUC0 172 aa12.37□□□□□ -0.43
SUMO3-201ENST00000332859 SPRR4Q96PI1 79 aa12.37□□□□□ -0.43
SUMO3-201ENST00000332859 IGLV8-61A0A075B6I0 122 aa12.34□□□□□ -0.43
SUMO3-201ENST00000332859 A0A1B0GVY2 172 aa12.34□□□□□ -0.43
SUMO3-201ENST00000332859 CRYGAP11844 174 aa12.34□□□□□ -0.43
SUMO3-201ENST00000332859 DNAH8Q96JB1 4490 aa12.33□□□□□ -0.44
SUMO3-201ENST00000332859 SPRR1BP22528 89 aa12.33□□□□□ -0.44
SUMO3-201ENST00000332859 BPY2O14599 106 aa12.31□□□□□ -0.44
SUMO3-201ENST00000332859 SMIM20Q8N5G0 67 aa12.31□□□□□ -0.44
SUMO3-201ENST00000332859 SS18L2Q9UHA2 77 aa12.29□□□□□ -0.44
SUMO3-201ENST00000332859 IGFL1Q6UW32 110 aa12.27□□□□□ -0.44
SUMO3-201ENST00000332859 KMT2CQ8NEZ4 4911 aaKnown RBP12.27□□□□□ -0.45
SUMO3-201ENST00000332859 ZNF861PO60384 105 aa12.26□□□□□ -0.45
SUMO3-201ENST00000332859 IGKV4-1P06312 121 aa12.26□□□□□ -0.45
SUMO3-201ENST00000332859 TRAV7A0A075B6U4 112 aa12.25□□□□□ -0.45
SUMO3-201ENST00000332859 IGLV7-43P04211 117 aa12.25□□□□□ -0.45
SUMO3-201ENST00000332859 ZNF706Q9Y5V0 76 aaPredicted RBP12.23□□□□□ -0.45
SUMO3-201ENST00000332859 Q8N9L7 120 aa12.2□□□□□ -0.46
SUMO3-201ENST00000332859 LINC00483Q53H64 154 aa12.15□□□□□ -0.46
SUMO3-201ENST00000332859 A0A0G2JQZ4 141 aa12.14□□□□□ -0.47
SUMO3-201ENST00000332859 DSCR10P59022 87 aa12.12□□□□□ -0.47
SUMO3-201ENST00000332859 PKHD1P08F94 4074 aa12.12□□□□□ -0.47
SUMO3-201ENST00000332859 A0A087WSZ3 146 aa12.11□□□□□ -0.47
SUMO3-201ENST00000332859 CYSTM1Q9H1C7 97 aa12.11□□□□□ -0.47
SUMO3-201ENST00000332859 TMEM258P61165 79 aa12.11□□□□□ -0.47
SUMO3-201ENST00000332859 LRP1BQ9NZR2 4599 aa12.11□□□□□ -0.47
SUMO3-201ENST00000332859 DYNC1H1Q14204 4646 aaKnown RBP12.1□□□□□ -0.47
SUMO3-201ENST00000332859 C20orf197Q8N268 126 aa12.1□□□□□ -0.47
SUMO3-201ENST00000332859 RPL37AP61513 92 aaKnown RBP12.07□□□□□ -0.48
SUMO3-201ENST00000332859 SRRM2Q9UQ35 2752 aaKnown RBP12.06□□□□□ -0.48
SUMO3-201ENST00000332859 KLKP1Q107X0 134 aa12.06□□□□□ -0.48
SUMO3-201ENST00000332859 K7EQZ3 153 aa12.05□□□□□ -0.48
SUMO3-201ENST00000332859 OCR1Q9BZK8 76 aa12.05□□□□□ -0.48
SUMO3-201ENST00000332859 IGLV9-49A0A0B4J1Y8 123 aa12.04□□□□□ -0.48
SUMO3-201ENST00000332859 RYR3Q15413 4870 aa12.03□□□□□ -0.48
SUMO3-201ENST00000332859 ANAPC11Q9NYG5 84 aa12.02□□□□□ -0.49
SUMO3-201ENST00000332859 SMR3BP02814 79 aaPredicted RBP12□□□□□ -0.49
SUMO3-201ENST00000332859 HCG22E2RYF7 251 aa11.98□□□□□ -0.49
SUMO3-201ENST00000332859 LINC00472Q9H8W2 130 aa11.97□□□□□ -0.49
SUMO3-201ENST00000332859 MOBPQ13875 183 aa11.97□□□□□ -0.49
SUMO3-201ENST00000332859 NDUFC1O43677 76 aa11.96□□□□□ -0.49
SUMO3-201ENST00000332859 DEFB116Q30KQ4 102 aa11.96□□□□□ -0.49
SUMO3-201ENST00000332859 TMEM254Q8TBM7 123 aa11.95□□□□□ -0.5
SUMO3-201ENST00000332859 H7BZZ5 65 aa11.95□□□□□ -0.5
SUMO3-201ENST00000332859 SNURFQ9Y675 71 aa11.95□□□□□ -0.5
SUMO3-201ENST00000332859 APOBP04114 4563 aaKnown RBP11.94□□□□□ -0.5
SUMO3-201ENST00000332859 SPINK6Q6UWN8 80 aa11.94□□□□□ -0.5
SUMO3-201ENST00000332859 J3KT08 172 aa11.93□□□□□ -0.5
SUMO3-201ENST00000332859 RPS28P62857 69 aaKnown RBP11.93□□□□□ -0.5
SUMO3-201ENST00000332859 FAM229BQ4G0N7 80 aa11.93□□□□□ -0.5
SUMO3-201ENST00000332859 A8MWP4 228 aa11.92□□□□□ -0.5
SUMO3-201ENST00000332859 VPS13BQ7Z7G8 4022 aa11.91□□□□□ -0.5
SUMO3-201ENST00000332859 PRR15Q8IV56 129 aa11.9□□□□□ -0.5
SUMO3-201ENST00000332859 A0A0U1RQV1 116 aa11.89□□□□□ -0.51
SUMO3-201ENST00000332859 FAM236DA0A1B0GTK5 79 aa11.88□□□□□ -0.51
SUMO3-201ENST00000332859 CDK2AP2O75956 126 aa11.88□□□□□ -0.51
SUMO3-201ENST00000332859 KRTAP1-4P0C5Y4 121 aa11.88□□□□□ -0.51
SUMO3-201ENST00000332859 FAM236CP0DP71 79 aa11.88□□□□□ -0.51
SUMO3-201ENST00000332859 SSBP3-AS1Q7Z2R9 100 aa11.87□□□□□ -0.51
SUMO3-201ENST00000332859 KRTAP10-4P60372 401 aaPredicted RBP11.86□□□□□ -0.51
SUMO3-201ENST00000332859 A0A087X002 238 aa11.85□□□□□ -0.51
SUMO3-201ENST00000332859 KRTAP29-1A8MX34 341 aaPredicted RBP11.84□□□□□ -0.51
SUMO3-201ENST00000332859 WFDC13Q8IUB5 93 aa11.83□□□□□ -0.51
SUMO3-201ENST00000332859 NDUFB1O75438 58 aa11.83□□□□□ -0.52
SUMO3-201ENST00000332859 Q96NJ1 140 aa11.83□□□□□ -0.52
SUMO3-201ENST00000332859 PLA2G1BP04054 148 aaKnown RBP11.82□□□□□ -0.52
SUMO3-201ENST00000332859 KRTAP13-2Q52LG2 175 aa11.82□□□□□ -0.52
SUMO3-201ENST00000332859 C5orf47Q569G3 176 aa11.82□□□□□ -0.52
SUMO3-201ENST00000332859 HRCT1Q6UXD1 115 aa11.82□□□□□ -0.52
SUMO3-201ENST00000332859 FAM229AH3BQW9 127 aa11.81□□□□□ -0.52
SUMO3-201ENST00000332859 ATP5EP56381 51 aaPredicted RBP11.81□□□□□ -0.52
SUMO3-201ENST00000332859 CASC2Q6XLA1 102 aa11.81□□□□□ -0.52
SUMO3-201ENST00000332859 CD164Q04900 197 aa11.79□□□□□ -0.52
SUMO3-201ENST00000332859 MMP24-AS1A0A0U1RRL7 71 aa11.74□□□□□ -0.53
SUMO3-201ENST00000332859 ZCCHC13Q8WW36 166 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms