RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 GAGE2AQ6NT46 116 aa10.3□□□□□ -0.76
RAB28-202ENST00000330852 J3QR89 54 aa10.29□□□□□ -0.76
RAB28-202ENST00000330852 RPS29P62273 56 aaKnown RBP10.29□□□□□ -0.76
RAB28-202ENST00000330852 IFITM1P13164 125 aa10.28□□□□□ -0.76
RAB28-202ENST00000330852 ERC2-IT1O76042 136 aa10.27□□□□□ -0.76
RAB28-202ENST00000330852 Q9BRP9 147 aa10.27□□□□□ -0.76
RAB28-202ENST00000330852 TRAV23DV6A0A075B6W5 121 aa10.26□□□□□ -0.77
RAB28-202ENST00000330852 SCGB1C2P0DMR2 95 aa10.25□□□□□ -0.77
RAB28-202ENST00000330852 TEN1Q86WV5 123 aa10.25□□□□□ -0.77
RAB28-202ENST00000330852 TRIAP1O43715 76 aa10.24□□□□□ -0.77
RAB28-202ENST00000330852 MOBPQ13875 183 aa10.24□□□□□ -0.77
RAB28-202ENST00000330852 H7C2G1 150 aa10.24□□□□□ -0.77
RAB28-202ENST00000330852 KRTAP13-3Q3SY46 172 aa10.24□□□□□ -0.77
RAB28-202ENST00000330852 SOSTDC1Q6X4U4 206 aa10.24□□□□□ -0.77
RAB28-202ENST00000330852 IGLV9-49A0A0B4J1Y8 123 aa10.23□□□□□ -0.77
RAB28-202ENST00000330852 ZNF73O43830 326 aaPredicted RBP10.23□□□□□ -0.77
RAB28-202ENST00000330852 LCE2AQ5TA79 106 aaPredicted RBP10.22□□□□□ -0.77
RAB28-202ENST00000330852 LINC00308Q8TCZ7 52 aa10.22□□□□□ -0.77
RAB28-202ENST00000330852 PPDPFLQ8WWR9 84 aa10.22□□□□□ -0.77
RAB28-202ENST00000330852 MUC17Q685J3 4493 aa10.22□□□□□ -0.77
RAB28-202ENST00000330852 NPC2P61916 151 aa10.21□□□□□ -0.77
RAB28-202ENST00000330852 SLC25A20O43772 301 aa10.21□□□□□ -0.78
RAB28-202ENST00000330852 ATXN8Q156A1 80 aa10.21□□□□□ -0.78
RAB28-202ENST00000330852 Q1RN00 199 aa10.21□□□□□ -0.78
RAB28-202ENST00000330852 ANKRD29Q8N6D5 301 aa10.2□□□□□ -0.78
RAB28-202ENST00000330852 C9JAW5 83 aa10.19□□□□□ -0.78
RAB28-202ENST00000330852 Q8N377 158 aa10.19□□□□□ -0.78
RAB28-202ENST00000330852 SIGMAR1Q99720 223 aa10.18□□□□□ -0.78
RAB28-202ENST00000330852 FAT4Q6V0I7 4981 aa10.18□□□□□ -0.78
RAB28-202ENST00000330852 ASB16-AS1Q495Z4 193 aa10.17□□□□□ -0.78
RAB28-202ENST00000330852 COPS9Q8WXC6 57 aa10.16□□□□□ -0.78
RAB28-202ENST00000330852 C9orf153Q5TBE3 101 aa10.16□□□□□ -0.78
RAB28-202ENST00000330852 SCGB1A1P11684 91 aa10.15□□□□□ -0.78
RAB28-202ENST00000330852 LST1O00453 97 aa10.14□□□□□ -0.79
RAB28-202ENST00000330852 OR13C6PQ8NH95 151 aa10.14□□□□□ -0.79
RAB28-202ENST00000330852 DHRS4-AS1Q9P1J3 65 aa10.14□□□□□ -0.79
RAB28-202ENST00000330852 COX6CP09669 75 aa10.13□□□□□ -0.79
RAB28-202ENST00000330852 SEC61BP60468 96 aaKnown RBP10.13□□□□□ -0.79
RAB28-202ENST00000330852 SPRR1BP22528 89 aa10.13□□□□□ -0.79
RAB28-202ENST00000330852 ST20-AS1Q8NBB2 130 aa10.12□□□□□ -0.79
RAB28-202ENST00000330852 CLEC2BQ92478 149 aa10.12□□□□□ -0.79
RAB28-202ENST00000330852 H3BT86 120 aa10.11□□□□□ -0.79
RAB28-202ENST00000330852 KRTAP9-2Q9BYQ4 174 aa10.07□□□□□ -0.8
RAB28-202ENST00000330852 LAMTOR3Q9UHA4 124 aa10.07□□□□□ -0.8
RAB28-202ENST00000330852 ELOF1P60002 83 aaKnown RBP10.07□□□□□ -0.8
RAB28-202ENST00000330852 LIMD2Q9BT23 127 aa10.07□□□□□ -0.8
RAB28-202ENST00000330852 COX7BP24311 80 aa10.06□□□□□ -0.8
RAB28-202ENST00000330852 TRBV7-6A0A0J9YX20 115 aa10.05□□□□□ -0.8
RAB28-202ENST00000330852 XP32Q5T750 250 aa10.05□□□□□ -0.8
RAB28-202ENST00000330852 TEX49A0A1B0GTD5 131 aa10.04□□□□□ -0.8
RAB28-202ENST00000330852 C6orf99Q4VX62 202 aa10.04□□□□□ -0.8
RAB28-202ENST00000330852 TRAV13-2A0A0B4J235 113 aa10.04□□□□□ -0.8
RAB28-202ENST00000330852 MT-ATP8P03928 68 aa10.04□□□□□ -0.8
RAB28-202ENST00000330852 TRACP01848 142 aa10.02□□□□□ -0.81
RAB28-202ENST00000330852 CD164Q04900 197 aa10.02□□□□□ -0.81
RAB28-202ENST00000330852 LINC01547P58512 204 aaPredicted RBP10□□□□□ -0.81
RAB28-202ENST00000330852 FAM218AQ96MZ4 157 aa10□□□□□ -0.81
RAB28-202ENST00000330852 KRTAP4-1Q9BYQ7 146 aa9.97□□□□□ -0.81
RAB28-202ENST00000330852 FAM240AA0A1B0GVK7 77 aa9.96□□□□□ -0.81
RAB28-202ENST00000330852 HRCT1Q6UXD1 115 aa9.96□□□□□ -0.82
RAB28-202ENST00000330852 DEFB105AQ8NG35 78 aa9.96□□□□□ -0.82
RAB28-202ENST00000330852 SMIM11BQ8TCY0 68 aa9.96□□□□□ -0.82
RAB28-202ENST00000330852 IGLV5-48A0A075B6I7 105 aa9.94□□□□□ -0.82
RAB28-202ENST00000330852 Q5XG85 94 aa9.94□□□□□ -0.82
RAB28-202ENST00000330852 BAALC-AS2P0C853 105 aa9.91□□□□□ -0.82
RAB28-202ENST00000330852 SMIM29Q86T20 159 aa9.91□□□□□ -0.82
RAB28-202ENST00000330852 H0YGX0 51 aa9.9□□□□□ -0.82
RAB28-202ENST00000330852 LCE2DQ5TA82 110 aaPredicted RBP9.89□□□□□ -0.83
RAB28-202ENST00000330852 Q6Q795 121 aa9.88□□□□□ -0.83
RAB28-202ENST00000330852 A0A1B0GV72 72 aa9.87□□□□□ -0.83
RAB28-202ENST00000330852 SNCGO76070 127 aa9.87□□□□□ -0.83
RAB28-202ENST00000330852 ACYP1P07311 99 aa9.86□□□□□ -0.83
RAB28-202ENST00000330852 C9orf92A6NGG3 77 aa9.85□□□□□ -0.83
RAB28-202ENST00000330852 OBSCN-AS1Q96MR7 158 aa9.84□□□□□ -0.83
RAB28-202ENST00000330852 PCOTHQ58A44 107 aa9.83□□□□□ -0.84
RAB28-202ENST00000330852 C1orf195Q5TG92 126 aa9.83□□□□□ -0.84
RAB28-202ENST00000330852 DNAL4O96015 105 aa9.82□□□□□ -0.84
RAB28-202ENST00000330852 A0A1B0GX51 115 aa9.81□□□□□ -0.84
RAB28-202ENST00000330852 IGLV8-61A0A075B6I0 122 aa9.8□□□□□ -0.84
RAB28-202ENST00000330852 TRBV7-7A0A0K0K1E9 115 aa9.8□□□□□ -0.84
RAB28-202ENST00000330852 F8WEM9 126 aa9.79□□□□□ -0.84
RAB28-202ENST00000330852 LINC00575Q6W349 94 aa9.79□□□□□ -0.84
RAB28-202ENST00000330852 KRTAP9-6A0A140TA67 174 aa9.78□□□□□ -0.84
RAB28-202ENST00000330852 LCE2CQ5TA81 110 aa9.78□□□□□ -0.84
RAB28-202ENST00000330852 NDUFV3P56181 108 aaKnown RBP9.76□□□□□ -0.85
RAB28-202ENST00000330852 A0A0G2JQZ4 141 aa9.76□□□□□ -0.85
RAB28-202ENST00000330852 hADV29S1A0JD25 119 aa9.75□□□□□ -0.85
RAB28-202ENST00000330852 Q6JHZ5 121 aa9.75□□□□□ -0.85
RAB28-202ENST00000330852 LINC00643Q86TS7 51 aa9.75□□□□□ -0.85
RAB28-202ENST00000330852 ANAPC13Q9BS18 74 aa9.75□□□□□ -0.85
RAB28-202ENST00000330852 ORMDL1Q9P0S3 153 aa9.75□□□□□ -0.85
RAB28-202ENST00000330852 KRTAP19-2Q3LHN2 52 aa9.74□□□□□ -0.85
RAB28-202ENST00000330852 IMUPQ9GZP8 106 aa9.74□□□□□ -0.85
RAB28-202ENST00000330852 Q6ZQY7 126 aa9.73□□□□□ -0.85
RAB28-202ENST00000330852 C14orf132Q9NPU4 83 aa9.73□□□□□ -0.85
RAB28-202ENST00000330852 RPL37P61927 97 aaKnown RBP9.72□□□□□ -0.85
RAB28-202ENST00000330852 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.7□□□□□ -0.86
RAB28-202ENST00000330852 TMEM256-PLSCR3K7ERE1 68 aa9.68□□□□□ -0.86
RAB28-202ENST00000330852 MT1HP80294 61 aa9.68□□□□□ -0.86
RAB28-202ENST00000330852 JMJD7-PLA2G4BH0Y9G9 81 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms