RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 C12orf57Q99622 126 aa11.66□□□□□ -0.54
UBE2D3-201ENST00000321805 C1orf195Q5TG92 126 aa11.65□□□□□ -0.54
UBE2D3-201ENST00000321805 Q6JHZ5 121 aa11.65□□□□□ -0.54
UBE2D3-201ENST00000321805 HIGD1BQ9P298 99 aa11.65□□□□□ -0.54
UBE2D3-201ENST00000321805 IGLV8-61A0A075B6I0 122 aa11.64□□□□□ -0.55
UBE2D3-201ENST00000321805 TCL1BO95988 128 aa11.64□□□□□ -0.55
UBE2D3-201ENST00000321805 KRTAP4-1Q9BYQ7 146 aa11.64□□□□□ -0.55
UBE2D3-201ENST00000321805 A0A0G2JQZ4 141 aa11.63□□□□□ -0.55
UBE2D3-201ENST00000321805 SPATA45Q537H7 98 aa11.62□□□□□ -0.55
UBE2D3-201ENST00000321805 C9orf92A6NGG3 77 aa11.61□□□□□ -0.55
UBE2D3-201ENST00000321805 CLEC2BQ92478 149 aa11.61□□□□□ -0.55
UBE2D3-201ENST00000321805 C14orf144Q96I85 54 aa11.61□□□□□ -0.55
UBE2D3-201ENST00000321805 VAMP8Q9BV40 100 aa11.61□□□□□ -0.55
UBE2D3-201ENST00000321805 PAM16Q9Y3D7 125 aa11.61□□□□□ -0.55
UBE2D3-201ENST00000321805 A0A0B4J2C4 111 aa11.59□□□□□ -0.55
UBE2D3-201ENST00000321805 CFC1BP0CG36 223 aa11.59□□□□□ -0.55
UBE2D3-201ENST00000321805 CFC1P0CG37 223 aa11.59□□□□□ -0.55
UBE2D3-201ENST00000321805 RAB37Q96AX2 223 aa11.59□□□□□ -0.55
UBE2D3-201ENST00000321805 OCIAD2Q56VL3 154 aa11.57□□□□□ -0.56
UBE2D3-201ENST00000321805 SNCGO76070 127 aa11.56□□□□□ -0.56
UBE2D3-201ENST00000321805 IGFL1Q6UW32 110 aa11.56□□□□□ -0.56
UBE2D3-201ENST00000321805 H0YGX0 51 aa11.55□□□□□ -0.56
UBE2D3-201ENST00000321805 C2orf91Q6ZV80 131 aa11.55□□□□□ -0.56
UBE2D3-201ENST00000321805 TRBV7-7A0A0K0K1E9 115 aa11.54□□□□□ -0.56
UBE2D3-201ENST00000321805 SNHG12Q9BXW3 62 aa11.54□□□□□ -0.56
UBE2D3-201ENST00000321805 PCOTHQ58A44 107 aa11.53□□□□□ -0.56
UBE2D3-201ENST00000321805 TMEM238LA0A1B0GVL6 79 aa11.52□□□□□ -0.57
UBE2D3-201ENST00000321805 A6NJY4 79 aa11.52□□□□□ -0.57
UBE2D3-201ENST00000321805 CEND1Q8N111 149 aa11.51□□□□□ -0.57
UBE2D3-201ENST00000321805 A0A1B0GX51 115 aa11.47□□□□□ -0.57
UBE2D3-201ENST00000321805 GHRHP01286 108 aa11.47□□□□□ -0.57
UBE2D3-201ENST00000321805 RPL37P61927 97 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-201ENST00000321805 KRTAP9-2Q9BYQ4 174 aa11.47□□□□□ -0.57
UBE2D3-201ENST00000321805 PRO1854Q9UHT4 67 aa11.47□□□□□ -0.57
UBE2D3-201ENST00000321805 FAM218AQ96MZ4 157 aa11.45□□□□□ -0.58
UBE2D3-201ENST00000321805 H3BUT2 72 aa11.43□□□□□ -0.58
UBE2D3-201ENST00000321805 Q6Q795 121 aa11.43□□□□□ -0.58
UBE2D3-201ENST00000321805 FXYD2P54710 66 aa11.41□□□□□ -0.58
UBE2D3-201ENST00000321805 SS18L2Q9UHA2 77 aa11.41□□□□□ -0.58
UBE2D3-201ENST00000321805 NDUFV3P56181 108 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-201ENST00000321805 LST1O00453 97 aa11.39□□□□□ -0.59
UBE2D3-201ENST00000321805 PYY3Q5JQD4 70 aa11.39□□□□□ -0.59
UBE2D3-201ENST00000321805 HSD52Q0P140 79 aa11.38□□□□□ -0.59
UBE2D3-201ENST00000321805 KRTAP19-2Q3LHN2 52 aa11.38□□□□□ -0.59
UBE2D3-201ENST00000321805 LCE2CQ5TA81 110 aa11.38□□□□□ -0.59
UBE2D3-201ENST00000321805 TEN1Q86WV5 123 aa11.38□□□□□ -0.59
UBE2D3-201ENST00000321805 TRIAP1O43715 76 aa11.35□□□□□ -0.59
UBE2D3-201ENST00000321805 H3BMG7 143 aa11.33□□□□□ -0.6
UBE2D3-201ENST00000321805 H3BQ85 93 aa11.32□□□□□ -0.6
UBE2D3-201ENST00000321805 SMCPP49901 116 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-201ENST00000321805 FABP2P12104 132 aa11.31□□□□□ -0.6
UBE2D3-201ENST00000321805 DNAL4O96015 105 aa11.3□□□□□ -0.6
UBE2D3-201ENST00000321805 Q75L30 129 aa11.3□□□□□ -0.6
UBE2D3-201ENST00000321805 OBSCN-AS1Q96MR7 158 aa11.3□□□□□ -0.6
UBE2D3-201ENST00000321805 COX6CP09669 75 aa11.28□□□□□ -0.6
UBE2D3-201ENST00000321805 UQCR10Q9UDW1 63 aa11.28□□□□□ -0.6
UBE2D3-201ENST00000321805 A0A087WSZ3 146 aa11.27□□□□□ -0.61
UBE2D3-201ENST00000321805 PSMB2P49721 201 aa11.27□□□□□ -0.61
UBE2D3-201ENST00000321805 ORMDL1Q9P0S3 153 aa11.27□□□□□ -0.61
UBE2D3-201ENST00000321805 MT1HP80294 61 aa11.26□□□□□ -0.61
UBE2D3-201ENST00000321805 K7ERJ3 54 aa11.25□□□□□ -0.61
UBE2D3-201ENST00000321805 ATP11AUNQ6ZP68 121 aa11.24□□□□□ -0.61
UBE2D3-201ENST00000321805 TMEM256-PLSCR3K7ERE1 68 aa11.22□□□□□ -0.61
UBE2D3-201ENST00000321805 TMA7Q9Y2S6 64 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-201ENST00000321805 A0A1W2PNM2 257 aa11.21□□□□□ -0.61
UBE2D3-201ENST00000321805 ANKRD29Q8N6D5 301 aa11.2□□□□□ -0.62
UBE2D3-201ENST00000321805 Q96NJ1 140 aa11.2□□□□□ -0.62
UBE2D3-201ENST00000321805 TRBV7-4A0A0J9YYF1 115 aa11.19□□□□□ -0.62
UBE2D3-201ENST00000321805 C20orf166-AS1Q96NR2 134 aa11.18□□□□□ -0.62
UBE2D3-201ENST00000321805 COX6B2Q6YFQ2 88 aa11.17□□□□□ -0.62
UBE2D3-201ENST00000321805 TRACP01848 142 aa11.15□□□□□ -0.62
UBE2D3-201ENST00000321805 UBE2V1Q13404 147 aa11.15□□□□□ -0.62
UBE2D3-201ENST00000321805 A8MUU9 505 aa11.13□□□□□ -0.63
UBE2D3-201ENST00000321805 SIGMAR1Q99720 223 aa11.12□□□□□ -0.63
UBE2D3-201ENST00000321805 KRTAP9-6A0A140TA67 174 aa11.09□□□□□ -0.63
UBE2D3-201ENST00000321805 CCKP06307 115 aa11.09□□□□□ -0.63
UBE2D3-201ENST00000321805 SCGB1C2P0DMR2 95 aa11.09□□□□□ -0.63
UBE2D3-201ENST00000321805 FLGP20930 4061 aaPredicted RBP11.08□□□□□ -0.64
UBE2D3-201ENST00000321805 A0A1B0GV72 72 aa11.08□□□□□ -0.64
UBE2D3-201ENST00000321805 IGKV4-1P06312 121 aa11.06□□□□□ -0.64
UBE2D3-201ENST00000321805 LORP23490 312 aaPredicted RBP11.06□□□□□ -0.64
UBE2D3-201ENST00000321805 DSCR10P59022 87 aa11.06□□□□□ -0.64
UBE2D3-201ENST00000321805 M0R2T5 61 aa11.05□□□□□ -0.64
UBE2D3-201ENST00000321805 KRTAP10-6P60371 365 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-201ENST00000321805 LINC00313P59037 77 aa11.04□□□□□ -0.64
UBE2D3-201ENST00000321805 LINC00472Q9H8W2 130 aa11.04□□□□□ -0.64
UBE2D3-201ENST00000321805 RBM3P98179 157 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-201ENST00000321805 M0R143 59 aa11.01□□□□□ -0.65
UBE2D3-201ENST00000321805 DSCR8Q96T75 97 aa11.01□□□□□ -0.65
UBE2D3-201ENST00000321805 C21orf62-AS1Q17RA5 79 aa11□□□□□ -0.65
UBE2D3-201ENST00000321805 KRTAP16-1A8MUX0 517 aa10.98□□□□□ -0.65
UBE2D3-201ENST00000321805 BAALC-AS2P0C853 105 aa10.96□□□□□ -0.65
UBE2D3-201ENST00000321805 VPS25Q9BRG1 176 aa10.96□□□□□ -0.65
UBE2D3-201ENST00000321805 TRBV20-1A0A075B6N2 111 aa10.95□□□□□ -0.66
UBE2D3-201ENST00000321805 DEFB116Q30KQ4 102 aa10.95□□□□□ -0.66
UBE2D3-201ENST00000321805 C9JAW5 83 aa10.94□□□□□ -0.66
UBE2D3-201ENST00000321805 SMIM6P0DI80 62 aa10.94□□□□□ -0.66
UBE2D3-201ENST00000321805 ATXN8Q156A1 80 aa10.93□□□□□ -0.66
UBE2D3-201ENST00000321805 C8orf87E5RJ46 101 aa10.92□□□□□ -0.66
UBE2D3-201ENST00000321805 IGHV6-1A0A0B4J1U7 121 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms