RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 RTL8CO15255 209 aa10.08□□□□□ -0.8
GCFC2-201ENST00000321027 H7BZZ5 65 aa10.08□□□□□ -0.8
GCFC2-201ENST00000321027 IGLV1-50A0A075B6I6 118 aa10.07□□□□□ -0.8
GCFC2-201ENST00000321027 ACYP2P14621 99 aa10.07□□□□□ -0.8
GCFC2-201ENST00000321027 FBN2P35556 2912 aa10.07□□□□□ -0.8
GCFC2-201ENST00000321027 KLKP1Q107X0 134 aa10.07□□□□□ -0.8
GCFC2-201ENST00000321027 CRYBG3Q68DQ2 2970 aa10.07□□□□□ -0.8
GCFC2-201ENST00000321027 Q8NDZ9 215 aa10.06□□□□□ -0.8
GCFC2-201ENST00000321027 IGLV8-61A0A075B6I0 122 aa10.05□□□□□ -0.8
GCFC2-201ENST00000321027 CASC10Q5T4H9 136 aa10.04□□□□□ -0.8
GCFC2-201ENST00000321027 H3BPC8 53 aa10.04□□□□□ -0.8
GCFC2-201ENST00000321027 LINC00313P59037 77 aa10.02□□□□□ -0.81
GCFC2-201ENST00000321027 HIVEP1P15822 2718 aa10.01□□□□□ -0.81
GCFC2-201ENST00000321027 A8MUN3 132 aa10.01□□□□□ -0.81
GCFC2-201ENST00000321027 ERC2-IT1O76042 136 aa10□□□□□ -0.81
GCFC2-201ENST00000321027 DCHS2Q6V1P9 2916 aa10□□□□□ -0.81
GCFC2-201ENST00000321027 A8MWP4 228 aa10□□□□□ -0.81
GCFC2-201ENST00000321027 IGFL1Q6UW32 110 aa10□□□□□ -0.81
GCFC2-201ENST00000321027 ATP11AUNQ6ZP68 121 aa10□□□□□ -0.81
GCFC2-201ENST00000321027 CYSTM1Q9H1C7 97 aa9.99□□□□□ -0.81
GCFC2-201ENST00000321027 TYMSOSQ8TAI1 123 aa9.99□□□□□ -0.81
GCFC2-201ENST00000321027 A0A1W2PNM2 257 aa9.98□□□□□ -0.81
GCFC2-201ENST00000321027 MRPL34Q9BQ48 92 aaKnown RBP9.94□□□□□ -0.82
GCFC2-201ENST00000321027 LINC00336Q6ZUF6 198 aa9.94□□□□□ -0.82
GCFC2-201ENST00000321027 PRR15Q8IV56 129 aa9.92□□□□□ -0.82
GCFC2-201ENST00000321027 STAB2Q8WWQ8 2551 aa9.92□□□□□ -0.82
GCFC2-201ENST00000321027 WIPF1O43516 503 aa9.92□□□□□ -0.82
GCFC2-201ENST00000321027 Q96NJ1 140 aa9.92□□□□□ -0.82
GCFC2-201ENST00000321027 COA5Q86WW8 74 aa9.91□□□□□ -0.82
GCFC2-201ENST00000321027 LOC101927531A0A1B0GV80 90 aa9.91□□□□□ -0.82
GCFC2-201ENST00000321027 ANAPC11Q9NYG5 84 aa9.9□□□□□ -0.82
GCFC2-201ENST00000321027 TLX1NBP0CAT3 122 aa9.9□□□□□ -0.83
GCFC2-201ENST00000321027 FAM229AH3BQW9 127 aa9.89□□□□□ -0.83
GCFC2-201ENST00000321027 PLA2G1BP04054 148 aaKnown RBP9.89□□□□□ -0.83
GCFC2-201ENST00000321027 NIPBLQ6KC79 2804 aaeCLIP9.88□□□□□ -0.83
GCFC2-201ENST00000321027 IGLV5-48A0A075B6I7 105 aa9.87□□□□□ -0.83
GCFC2-201ENST00000321027 C8orf17Q9NRJ1 99 aa9.87□□□□□ -0.83
GCFC2-201ENST00000321027 C9orf163Q8N9P6 203 aa9.86□□□□□ -0.83
GCFC2-201ENST00000321027 MXRA5Q9NR99 2828 aa9.85□□□□□ -0.83
GCFC2-201ENST00000321027 PLA2G2DQ9UNK4 145 aa9.85□□□□□ -0.83
GCFC2-201ENST00000321027 BSNQ9UPA5 3926 aa9.85□□□□□ -0.83
GCFC2-201ENST00000321027 DSCR10P59022 87 aa9.84□□□□□ -0.83
GCFC2-201ENST00000321027 OCR1Q9BZK8 76 aa9.83□□□□□ -0.84
GCFC2-201ENST00000321027 C8orf87E5RJ46 101 aa9.82□□□□□ -0.84
GCFC2-201ENST00000321027 ZNF861PO60384 105 aa9.82□□□□□ -0.84
GCFC2-201ENST00000321027 APLNQ9ULZ1 77 aa9.81□□□□□ -0.84
GCFC2-201ENST00000321027 WWC2-AS2Q96NR7 200 aa9.81□□□□□ -0.84
GCFC2-201ENST00000321027 A0A1B0GVX0 72 aa9.8□□□□□ -0.84
GCFC2-201ENST00000321027 CELSR1Q9NYQ6 3014 aa9.79□□□□□ -0.84
GCFC2-201ENST00000321027 A0A087WTM6 91 aa9.79□□□□□ -0.84
GCFC2-201ENST00000321027 CYP4F30PQ9H0H9 118 aa9.77□□□□□ -0.85
GCFC2-201ENST00000321027 KMT2BQ9UMN6 2715 aaPredicted RBP9.76□□□□□ -0.85
GCFC2-201ENST00000321027 SSBP3-AS1Q7Z2R9 100 aa9.76□□□□□ -0.85
GCFC2-201ENST00000321027 UQCR11O14957 56 aa9.75□□□□□ -0.85
GCFC2-201ENST00000321027 PSORS1C2Q9UIG4 136 aa9.75□□□□□ -0.85
GCFC2-201ENST00000321027 ZFHX3Q15911 3703 aa9.74□□□□□ -0.85
GCFC2-201ENST00000321027 DMBT1Q9UGM3 2413 aaPredicted RBP9.74□□□□□ -0.85
GCFC2-201ENST00000321027 IGLV5-37A0A075B6J1 123 aa9.73□□□□□ -0.85
GCFC2-201ENST00000321027 SMR3BP02814 79 aaPredicted RBP9.72□□□□□ -0.85
GCFC2-201ENST00000321027 CNBPP62633 177 aaKnown RBP9.71□□□□□ -0.86
GCFC2-201ENST00000321027 SPRR4Q96PI1 79 aa9.71□□□□□ -0.86
GCFC2-201ENST00000321027 C9orf92A6NGG3 77 aa9.69□□□□□ -0.86
GCFC2-201ENST00000321027 OXTP01178 125 aa9.69□□□□□ -0.86
GCFC2-201ENST00000321027 CUBNO60494 3623 aa9.68□□□□□ -0.86
GCFC2-201ENST00000321027 Q5XG85 94 aa9.68□□□□□ -0.86
GCFC2-201ENST00000321027 KRTAP26-1Q6PEX3 210 aa9.68□□□□□ -0.86
GCFC2-201ENST00000321027 LINC00304Q8N9R0 145 aa9.67□□□□□ -0.86
GCFC2-201ENST00000321027 IGLV7-43P04211 117 aa9.66□□□□□ -0.86
GCFC2-201ENST00000321027 MIR22HGQ0VDD5 57 aa9.65□□□□□ -0.86
GCFC2-201ENST00000321027 FP248Q71RG6 208 aaPredicted RBP9.64□□□□□ -0.87
GCFC2-201ENST00000321027 SPRR1AP35321 89 aa9.64□□□□□ -0.87
GCFC2-201ENST00000321027 FAM229BQ4G0N7 80 aa9.64□□□□□ -0.87
GCFC2-201ENST00000321027 PRR26Q8N8Z3 221 aa9.63□□□□□ -0.87
GCFC2-201ENST00000321027 TENM4Q6N022 2769 aa9.62□□□□□ -0.87
GCFC2-201ENST00000321027 SPINT4Q6UDR6 99 aa9.61□□□□□ -0.87
GCFC2-201ENST00000321027 VPS13CQ709C8 3753 aa9.61□□□□□ -0.87
GCFC2-201ENST00000321027 Q8N1X5 172 aa9.59□□□□□ -0.87
GCFC2-201ENST00000321027 SPANXA2-OT1Q8N9U9 137 aa9.57□□□□□ -0.88
GCFC2-201ENST00000321027 KRTAP1-5Q9BYS1 174 aa9.57□□□□□ -0.88
GCFC2-201ENST00000321027 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.56□□□□□ -0.88
GCFC2-201ENST00000321027 TNP2Q05952 138 aa9.53□□□□□ -0.88
GCFC2-201ENST00000321027 Q1T7F1 81 aa9.48□□□□□ -0.89
GCFC2-201ENST00000321027 KTN1-AS1Q86SY8 53 aa9.48□□□□□ -0.89
GCFC2-201ENST00000321027 J3QL48 77 aa9.47□□□□□ -0.89
GCFC2-201ENST00000321027 CD164Q04900 197 aa9.47□□□□□ -0.89
GCFC2-201ENST00000321027 COX6B2Q6YFQ2 88 aa9.47□□□□□ -0.89
GCFC2-201ENST00000321027 A0A0D9SG42 100 aa9.46□□□□□ -0.9
GCFC2-201ENST00000321027 KRTAP4-16G5E9R7 235 aaPredicted RBP9.46□□□□□ -0.9
GCFC2-201ENST00000321027 CRIPTQ9P021 101 aa9.45□□□□□ -0.9
GCFC2-201ENST00000321027 CSMD2Q7Z408 3487 aa9.45□□□□□ -0.9
GCFC2-201ENST00000321027 MMP24-AS1A0A0U1RRL7 71 aa9.45□□□□□ -0.9
GCFC2-201ENST00000321027 LINC00472Q9H8W2 130 aa9.43□□□□□ -0.9
GCFC2-201ENST00000321027 CDC42SE1Q9NRR8 79 aa9.43□□□□□ -0.9
GCFC2-201ENST00000321027 LINC01554Q52M75 96 aa9.42□□□□□ -0.9
GCFC2-201ENST00000321027 LCA10Q71F78 164 aa9.4□□□□□ -0.9
GCFC2-201ENST00000321027 IGLV7-46A0A075B6I9 117 aa9.4□□□□□ -0.9
GCFC2-201ENST00000321027 HRES1P13985 223 aa9.39□□□□□ -0.91
GCFC2-201ENST00000321027 Q8N9P0 234 aaPredicted RBP9.38□□□□□ -0.91
GCFC2-201ENST00000321027 SPRR1BP22528 89 aa9.38□□□□□ -0.91
GCFC2-201ENST00000321027 TENM3Q9P273 2699 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms