RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 HAMPP81172 84 aa10.55□□□□□ -0.72
SSR4-201ENST00000320857 CXCL6P80162 114 aa10.53□□□□□ -0.72
SSR4-201ENST00000320857 PLAC8Q9NZF1 115 aa10.53□□□□□ -0.72
SSR4-201ENST00000320857 A0A1W2PNM2 257 aa10.51□□□□□ -0.73
SSR4-201ENST00000320857 SPRR1BP22528 89 aa10.51□□□□□ -0.73
SSR4-201ENST00000320857 Q8NBF4 154 aa10.51□□□□□ -0.73
SSR4-201ENST00000320857 HECTD4Q9Y4D8 3996 aa10.51□□□□□ -0.73
SSR4-201ENST00000320857 A0A087WVE0 104 aa10.5□□□□□ -0.73
SSR4-201ENST00000320857 NREPQ16612 68 aa10.5□□□□□ -0.73
SSR4-201ENST00000320857 KRTAP13-1Q8IUC0 172 aa10.5□□□□□ -0.73
SSR4-201ENST00000320857 ATOX1O00244 68 aa10.5□□□□□ -0.73
SSR4-201ENST00000320857 IGLV8-61A0A075B6I0 122 aa10.49□□□□□ -0.73
SSR4-201ENST00000320857 SPRR4Q96PI1 79 aa10.47□□□□□ -0.73
SSR4-201ENST00000320857 IGFL1Q6UW32 110 aa10.44□□□□□ -0.74
SSR4-201ENST00000320857 CRYGAP11844 174 aa10.44□□□□□ -0.74
SSR4-201ENST00000320857 FRAS1Q86XX4 4008 aa10.43□□□□□ -0.74
SSR4-201ENST00000320857 SCXQ7RTU7 201 aa10.43□□□□□ -0.74
SSR4-201ENST00000320857 PSORS1C2Q9UIG4 136 aa10.43□□□□□ -0.74
SSR4-201ENST00000320857 CCDC179H3BU77 68 aa10.42□□□□□ -0.74
SSR4-201ENST00000320857 BPY2O14599 106 aa10.41□□□□□ -0.74
SSR4-201ENST00000320857 KRTAP10-2P60368 255 aa10.41□□□□□ -0.74
SSR4-201ENST00000320857 ZNF706Q9Y5V0 76 aaPredicted RBP10.4□□□□□ -0.74
SSR4-201ENST00000320857 DNAH11Q96DT5 4516 aa10.4□□□□□ -0.75
SSR4-201ENST00000320857 UQCRQO14949 82 aa10.38□□□□□ -0.75
SSR4-201ENST00000320857 ZNF861PO60384 105 aa10.37□□□□□ -0.75
SSR4-201ENST00000320857 COX7CP15954 63 aa10.37□□□□□ -0.75
SSR4-201ENST00000320857 DNAH5Q8TE73 4624 aa10.36□□□□□ -0.75
SSR4-201ENST00000320857 A0A0G2JQZ4 141 aa10.36□□□□□ -0.75
SSR4-201ENST00000320857 LINC00483Q53H64 154 aa10.35□□□□□ -0.75
SSR4-201ENST00000320857 SERP2Q8N6R1 65 aa10.35□□□□□ -0.75
SSR4-201ENST00000320857 IGKV4-1P06312 121 aa10.33□□□□□ -0.76
SSR4-201ENST00000320857 FAT2Q9NYQ8 4349 aa10.32□□□□□ -0.76
SSR4-201ENST00000320857 A0A087WSZ3 146 aa10.31□□□□□ -0.76
SSR4-201ENST00000320857 LINC00336Q6ZUF6 198 aa10.31□□□□□ -0.76
SSR4-201ENST00000320857 CIRBP-AS1Q8TBR5 109 aa10.31□□□□□ -0.76
SSR4-201ENST00000320857 FAM30AQ9NZY2 134 aa10.31□□□□□ -0.76
SSR4-201ENST00000320857 DNAH8Q96JB1 4490 aa10.31□□□□□ -0.76
SSR4-201ENST00000320857 IGLV7-43P04211 117 aa10.31□□□□□ -0.76
SSR4-201ENST00000320857 SMIM20Q8N5G0 67 aa10.31□□□□□ -0.76
SSR4-201ENST00000320857 C9orf153Q5TBE3 101 aa10.3□□□□□ -0.76
SSR4-201ENST00000320857 Q8N9L7 120 aa10.3□□□□□ -0.76
SSR4-201ENST00000320857 RPL37AP61513 92 aaKnown RBP10.29□□□□□ -0.76
SSR4-201ENST00000320857 Q6ZSA8 131 aa10.29□□□□□ -0.76
SSR4-201ENST00000320857 PKD1P98161 4303 aa10.29□□□□□ -0.76
SSR4-201ENST00000320857 KRTAP10-1P60331 282 aa10.28□□□□□ -0.76
SSR4-201ENST00000320857 IGLV9-49A0A0B4J1Y8 123 aa10.27□□□□□ -0.77
SSR4-201ENST00000320857 TRAV7A0A075B6U4 112 aa10.25□□□□□ -0.77
SSR4-201ENST00000320857 DSCR10P59022 87 aa10.25□□□□□ -0.77
SSR4-201ENST00000320857 EPPK1P58107 5090 aaKnown RBP10.22□□□□□ -0.77
SSR4-201ENST00000320857 A0A1B0GVY2 172 aa10.21□□□□□ -0.78
SSR4-201ENST00000320857 K7EQZ3 153 aa10.19□□□□□ -0.78
SSR4-201ENST00000320857 MOBPQ13875 183 aa10.19□□□□□ -0.78
SSR4-201ENST00000320857 ANAPC11Q9NYG5 84 aa10.18□□□□□ -0.78
SSR4-201ENST00000320857 SRRM2Q9UQ35 2752 aaKnown RBP10.17□□□□□ -0.78
SSR4-201ENST00000320857 DEFB116Q30KQ4 102 aa10.17□□□□□ -0.78
SSR4-201ENST00000320857 LINC00472Q9H8W2 130 aa10.17□□□□□ -0.78
SSR4-201ENST00000320857 SS18L2Q9UHA2 77 aa10.15□□□□□ -0.79
SSR4-201ENST00000320857 J3KT08 172 aa10.14□□□□□ -0.79
SSR4-201ENST00000320857 HCG22E2RYF7 251 aa10.12□□□□□ -0.79
SSR4-201ENST00000320857 HRCT1Q6UXD1 115 aa10.12□□□□□ -0.79
SSR4-201ENST00000320857 C20orf197Q8N268 126 aa10.12□□□□□ -0.79
SSR4-201ENST00000320857 PKHD1P08F94 4074 aa10.11□□□□□ -0.79
SSR4-201ENST00000320857 A8MWP4 228 aa10.11□□□□□ -0.79
SSR4-201ENST00000320857 OCR1Q9BZK8 76 aa10.11□□□□□ -0.79
SSR4-201ENST00000320857 DYNC1H1Q14204 4646 aaKnown RBP10.1□□□□□ -0.79
SSR4-201ENST00000320857 PRR15Q8IV56 129 aa10.09□□□□□ -0.79
SSR4-201ENST00000320857 SSBP3-AS1Q7Z2R9 100 aa10.09□□□□□ -0.79
SSR4-201ENST00000320857 LRP1BQ9NZR2 4599 aa10.08□□□□□ -0.8
SSR4-201ENST00000320857 CYSTM1Q9H1C7 97 aa10.07□□□□□ -0.8
SSR4-201ENST00000320857 CD164Q04900 197 aa10.06□□□□□ -0.8
SSR4-201ENST00000320857 NDUFB1O75438 58 aa10.06□□□□□ -0.8
SSR4-201ENST00000320857 Q96NJ1 140 aa10.06□□□□□ -0.8
SSR4-201ENST00000320857 KLKP1Q107X0 134 aa10.05□□□□□ -0.8
SSR4-201ENST00000320857 FAM229BQ4G0N7 80 aa10.05□□□□□ -0.8
SSR4-201ENST00000320857 TMEM258P61165 79 aa10.03□□□□□ -0.8
SSR4-201ENST00000320857 WFDC13Q8IUB5 93 aa10.03□□□□□ -0.8
SSR4-201ENST00000320857 BIRC6Q9NR09 4857 aa10.01□□□□□ -0.81
SSR4-201ENST00000320857 TMEM254Q8TBM7 123 aa10.01□□□□□ -0.81
SSR4-201ENST00000320857 KRTAP29-1A8MX34 341 aaPredicted RBP10□□□□□ -0.81
SSR4-201ENST00000320857 CASC2Q6XLA1 102 aa10□□□□□ -0.81
SSR4-201ENST00000320857 SNURFQ9Y675 71 aa10□□□□□ -0.81
SSR4-201ENST00000320857 CDK2AP2O75956 126 aa9.99□□□□□ -0.81
SSR4-201ENST00000320857 NDUFC1O43677 76 aa9.98□□□□□ -0.81
SSR4-201ENST00000320857 A0A087X002 238 aa9.97□□□□□ -0.81
SSR4-201ENST00000320857 KRTAP13-2Q52LG2 175 aa9.96□□□□□ -0.81
SSR4-201ENST00000320857 KRTAP1-4P0C5Y4 121 aa9.96□□□□□ -0.82
SSR4-201ENST00000320857 A0A0U1RQV1 116 aa9.95□□□□□ -0.82
SSR4-201ENST00000320857 MMP24-AS1A0A0U1RRL7 71 aa9.95□□□□□ -0.82
SSR4-201ENST00000320857 H7BZZ5 65 aa9.95□□□□□ -0.82
SSR4-201ENST00000320857 C5orf47Q569G3 176 aa9.94□□□□□ -0.82
SSR4-201ENST00000320857 SPINK6Q6UWN8 80 aa9.94□□□□□ -0.82
SSR4-201ENST00000320857 APOBP04114 4563 aaKnown RBP9.94□□□□□ -0.82
SSR4-201ENST00000320857 A0A1B0GVX0 72 aa9.93□□□□□ -0.82
SSR4-201ENST00000320857 ASB16-AS1Q495Z4 193 aa9.93□□□□□ -0.82
SSR4-201ENST00000320857 VPS13BQ7Z7G8 4022 aa9.92□□□□□ -0.82
SSR4-201ENST00000320857 hDV103S1A0JD37 113 aa9.92□□□□□ -0.82
SSR4-201ENST00000320857 C8orf17Q9NRJ1 99 aa9.92□□□□□ -0.82
SSR4-201ENST00000320857 KIAA1109Q2LD37 5005 aa9.91□□□□□ -0.82
SSR4-201ENST00000320857 RYR1P21817 5038 aa9.91□□□□□ -0.82
SSR4-201ENST00000320857 IGHV6-1A0A0B4J1U7 121 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms