RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 FLG2Q5D862 2391 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-202ENST00000318007 K7EP34 96 aa9.23□□□□□ -0.93
PDLIM5-202ENST00000318007 SIGMAR1Q99720 223 aa9.23□□□□□ -0.93
PDLIM5-202ENST00000318007 TRACP01848 142 aa9.23□□□□□ -0.93
PDLIM5-202ENST00000318007 LINC01547P58512 204 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-202ENST00000318007 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-202ENST00000318007 Q8N377 158 aa9.22□□□□□ -0.93
PDLIM5-202ENST00000318007 ORMDL1Q9P0S3 153 aa9.22□□□□□ -0.93
PDLIM5-202ENST00000318007 IGLV9-49A0A0B4J1Y8 123 aa9.21□□□□□ -0.93
PDLIM5-202ENST00000318007 A0A1B0GX51 115 aa9.21□□□□□ -0.94
PDLIM5-202ENST00000318007 C4orf48Q5BLP8 95 aa9.21□□□□□ -0.94
PDLIM5-202ENST00000318007 ZNF706Q9Y5V0 76 aaPredicted RBP9.2□□□□□ -0.94
PDLIM5-202ENST00000318007 A0A087X002 238 aa9.19□□□□□ -0.94
PDLIM5-202ENST00000318007 KRTAP1-4P0C5Y4 121 aa9.19□□□□□ -0.94
PDLIM5-202ENST00000318007 TEX49A0A1B0GTD5 131 aa9.19□□□□□ -0.94
PDLIM5-202ENST00000318007 PKHD1L1Q86WI1 4243 aa9.19□□□□□ -0.94
PDLIM5-202ENST00000318007 BAALC-AS2P0C853 105 aa9.18□□□□□ -0.94
PDLIM5-202ENST00000318007 IGLV5-48A0A075B6I7 105 aa9.17□□□□□ -0.94
PDLIM5-202ENST00000318007 J3QR89 54 aa9.17□□□□□ -0.94
PDLIM5-202ENST00000318007 PRR26Q8N8Z3 221 aa9.16□□□□□ -0.94
PDLIM5-202ENST00000318007 LAMTOR3Q9UHA4 124 aa9.16□□□□□ -0.94
PDLIM5-202ENST00000318007 A0A0G2JQZ4 141 aa9.15□□□□□ -0.94
PDLIM5-202ENST00000318007 C9orf153Q5TBE3 101 aa9.15□□□□□ -0.94
PDLIM5-202ENST00000318007 SMIM29Q86T20 159 aa9.15□□□□□ -0.95
PDLIM5-202ENST00000318007 TMEM256-PLSCR3K7ERE1 68 aa9.13□□□□□ -0.95
PDLIM5-202ENST00000318007 MOBPQ13875 183 aa9.13□□□□□ -0.95
PDLIM5-202ENST00000318007 LINC00483Q53H64 154 aa9.13□□□□□ -0.95
PDLIM5-202ENST00000318007 FAT3Q8TDW7 4589 aa9.13□□□□□ -0.95
PDLIM5-202ENST00000318007 PCLOQ9Y6V0 5065 aa9.12□□□□□ -0.95
PDLIM5-202ENST00000318007 NDUFV3P56181 108 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-202ENST00000318007 KRTAP13-2Q52LG2 175 aa9.12□□□□□ -0.95
PDLIM5-202ENST00000318007 ANKRD29Q8N6D5 301 aa9.12□□□□□ -0.95
PDLIM5-202ENST00000318007 CRYGAP11844 174 aa9.11□□□□□ -0.95
PDLIM5-202ENST00000318007 F8WEM9 126 aa9.1□□□□□ -0.95
PDLIM5-202ENST00000318007 SPRR1BP22528 89 aa9.1□□□□□ -0.95
PDLIM5-202ENST00000318007 PRO0461Q9UI25 63 aa9.1□□□□□ -0.95
PDLIM5-202ENST00000318007 GHRHP01286 108 aa9.08□□□□□ -0.96
PDLIM5-202ENST00000318007 H3BT86 120 aa9.07□□□□□ -0.96
PDLIM5-202ENST00000318007 HRCT1Q6UXD1 115 aa9.07□□□□□ -0.96
PDLIM5-202ENST00000318007 TYMSOSQ8TAI1 123 aa9.07□□□□□ -0.96
PDLIM5-202ENST00000318007 PPDPFLQ8WWR9 84 aa9.06□□□□□ -0.96
PDLIM5-202ENST00000318007 TNXBP22105 4242 aa9.05□□□□□ -0.96
PDLIM5-202ENST00000318007 FAM229BQ4G0N7 80 aa9.05□□□□□ -0.96
PDLIM5-202ENST00000318007 LINC01600Q96MT4 127 aa9.04□□□□□ -0.96
PDLIM5-202ENST00000318007 C14orf132Q9NPU4 83 aa9.04□□□□□ -0.96
PDLIM5-202ENST00000318007 F8W1H4 67 aa9.04□□□□□ -0.96
PDLIM5-202ENST00000318007 ETDBQ3ZM63 59 aa9.04□□□□□ -0.96
PDLIM5-202ENST00000318007 Q8NBF4 154 aa9.04□□□□□ -0.96
PDLIM5-202ENST00000318007 RBM3P98179 157 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-202ENST00000318007 IGFL1Q6UW32 110 aa9.02□□□□□ -0.97
PDLIM5-202ENST00000318007 H3BQ85 93 aa9.01□□□□□ -0.97
PDLIM5-202ENST00000318007 DSCR8Q96T75 97 aa8.99□□□□□ -0.97
PDLIM5-202ENST00000318007 JMJD7-PLA2G4BH0Y9G9 81 aa8.97□□□□□ -0.97
PDLIM5-202ENST00000318007 MT1HL1P0DM35 61 aa8.96□□□□□ -0.98
PDLIM5-202ENST00000318007 TEN1Q86WV5 123 aa8.96□□□□□ -0.98
PDLIM5-202ENST00000318007 CCKP06307 115 aa8.95□□□□□ -0.98
PDLIM5-202ENST00000318007 IGLV8-61A0A075B6I0 122 aa8.95□□□□□ -0.98
PDLIM5-202ENST00000318007 KRTAP10-8P60410 259 aa8.95□□□□□ -0.98
PDLIM5-202ENST00000318007 LINC00304Q8N9R0 145 aa8.95□□□□□ -0.98
PDLIM5-202ENST00000318007 TRBV7-4A0A0J9YYF1 115 aa8.94□□□□□ -0.98
PDLIM5-202ENST00000318007 SSBP3-AS1Q7Z2R9 100 aa8.94□□□□□ -0.98
PDLIM5-202ENST00000318007 OBSCN-AS1Q96MR7 158 aa8.93□□□□□ -0.98
PDLIM5-202ENST00000318007 A0A1W2PNM2 257 aa8.93□□□□□ -0.98
PDLIM5-202ENST00000318007 Q6JHZ5 121 aa8.93□□□□□ -0.98
PDLIM5-202ENST00000318007 OXTP01178 125 aa8.92□□□□□ -0.98
PDLIM5-202ENST00000318007 Q6ZQT0 140 aa8.92□□□□□ -0.98
PDLIM5-202ENST00000318007 SS18L2Q9UHA2 77 aa8.92□□□□□ -0.98
PDLIM5-202ENST00000318007 KRTAP29-1A8MX34 341 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-202ENST00000318007 LCE2AQ5TA79 106 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-202ENST00000318007 DMBT1Q9UGM3 2413 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-202ENST00000318007 ANAPC13Q9BS18 74 aa8.9□□□□□ -0.99
PDLIM5-202ENST00000318007 A0A087WSZ3 146 aa8.89□□□□□ -0.99
PDLIM5-202ENST00000318007 LOC110117498A0A087WWA1 95 aa8.87□□□□□ -0.99
PDLIM5-202ENST00000318007 RETNLBQ9BQ08 111 aa8.86□□□□□ -0.99
PDLIM5-202ENST00000318007 TRBV7-7A0A0K0K1E9 115 aa8.85□□□□□ -0.99
PDLIM5-202ENST00000318007 CDIP1Q9H305 208 aa8.84□□□□□ -0.99
PDLIM5-202ENST00000318007 LCE2CQ5TA81 110 aa8.84□□□□□ -0.99
PDLIM5-202ENST00000318007 HERC1Q15751 4861 aa8.84□□□□□ -0.99
PDLIM5-202ENST00000318007 SPINK1P00995 79 aa8.83□□□□□ -1
PDLIM5-202ENST00000318007 PDE6GP18545 87 aa8.82□□□□□ -1
PDLIM5-202ENST00000318007 MT-ATP8P03928 68 aa8.81□□□□□ -1
PDLIM5-202ENST00000318007 DEFB116Q30KQ4 102 aa8.81□□□□□ -1
PDLIM5-202ENST00000318007 SPAG11AQ6PDA7 123 aa8.81□□□□□ -1
PDLIM5-202ENST00000318007 SMIM20Q8N5G0 67 aa8.8□□□□□ -1
PDLIM5-202ENST00000318007 CD164Q04900 197 aa8.79□□□□□ -1
PDLIM5-202ENST00000318007 Q6Q795 121 aa8.79□□□□□ -1
PDLIM5-202ENST00000318007 LIMD2Q9BT23 127 aa8.77□□□□□ -1.01
PDLIM5-202ENST00000318007 LINC00846Q9NV44 126 aa8.76□□□□□ -1.01
PDLIM5-202ENST00000318007 NREPQ16612 68 aa8.72□□□□□ -1.01
PDLIM5-202ENST00000318007 C5orf47Q569G3 176 aa8.72□□□□□ -1.01
PDLIM5-202ENST00000318007 RPS29P62273 56 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-202ENST00000318007 C1orf195Q5TG92 126 aa8.7□□□□□ -1.02
PDLIM5-202ENST00000318007 PRR4Q16378 134 aa8.7□□□□□ -1.02
PDLIM5-202ENST00000318007 Q6ZVQ6 151 aa8.69□□□□□ -1.02
PDLIM5-202ENST00000318007 Q96NJ1 140 aa8.69□□□□□ -1.02
PDLIM5-202ENST00000318007 UBL5Q9BZL1 73 aa8.68□□□□□ -1.02
PDLIM5-202ENST00000318007 CCDC179H3BU77 68 aa8.67□□□□□ -1.02
PDLIM5-202ENST00000318007 IGKV4-1P06312 121 aa8.67□□□□□ -1.02
PDLIM5-202ENST00000318007 LPAP08519 4548 aa8.67□□□□□ -1.02
PDLIM5-202ENST00000318007 Q5XG85 94 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms