RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 TLX1NBP0CAT3 122 aa9.5□□□□□ -0.89
TFE3-201ENST00000315869 SRRM2Q9UQ35 2752 aaKnown RBP9.49□□□□□ -0.89
TFE3-201ENST00000315869 DSCR10P59022 87 aa9.49□□□□□ -0.89
TFE3-201ENST00000315869 RPL37AP61513 92 aaKnown RBP9.49□□□□□ -0.89
TFE3-201ENST00000315869 KRTAP4-16G5E9R7 235 aaPredicted RBP9.48□□□□□ -0.89
TFE3-201ENST00000315869 UBE2AP49459 152 aa9.48□□□□□ -0.89
TFE3-201ENST00000315869 HCG22E2RYF7 251 aa9.46□□□□□ -0.9
TFE3-201ENST00000315869 CHTF8P0CG12 524 aa9.46□□□□□ -0.9
TFE3-201ENST00000315869 SPRR1AP35321 89 aa9.46□□□□□ -0.9
TFE3-201ENST00000315869 PLA2G2DQ9UNK4 145 aa9.46□□□□□ -0.9
TFE3-201ENST00000315869 MEGF8Q7Z7M0 2845 aa9.46□□□□□ -0.9
TFE3-201ENST00000315869 IGFL1Q6UW32 110 aa9.46□□□□□ -0.9
TFE3-201ENST00000315869 TNP2Q05952 138 aa9.45□□□□□ -0.9
TFE3-201ENST00000315869 PRO0628Q9UI54 55 aa9.44□□□□□ -0.9
TFE3-201ENST00000315869 LINC00208Q96KT6 92 aa9.42□□□□□ -0.9
TFE3-201ENST00000315869 SPRR4Q96PI1 79 aa9.42□□□□□ -0.9
TFE3-201ENST00000315869 DNAH9Q9NYC9 4486 aa9.42□□□□□ -0.9
TFE3-201ENST00000315869 IGLV5-37A0A075B6J1 123 aa9.41□□□□□ -0.9
TFE3-201ENST00000315869 MP68P56378 58 aa9.41□□□□□ -0.9
TFE3-201ENST00000315869 PHF5AQ7RTV0 110 aaKnown RBP9.41□□□□□ -0.9
TFE3-201ENST00000315869 DNAH10Q8IVF4 4471 aa9.41□□□□□ -0.9
TFE3-201ENST00000315869 A0A1B0GW54 56 aa9.4□□□□□ -0.9
TFE3-201ENST00000315869 PRKDCP78527 4128 aaKnown RBP9.4□□□□□ -0.9
TFE3-201ENST00000315869 KRTAP1-5Q9BYS1 174 aa9.39□□□□□ -0.91
TFE3-201ENST00000315869 H0Y9J4 135 aa9.38□□□□□ -0.91
TFE3-201ENST00000315869 PSPHP1O15172 72 aa9.38□□□□□ -0.91
TFE3-201ENST00000315869 C1orf64Q8NEQ6 169 aa9.38□□□□□ -0.91
TFE3-201ENST00000315869 DNAH7Q8WXX0 4024 aa9.37□□□□□ -0.91
TFE3-201ENST00000315869 C16orf90A8MZG2 172 aa9.35□□□□□ -0.91
TFE3-201ENST00000315869 CASC2Q6XLA1 102 aa9.34□□□□□ -0.91
TFE3-201ENST00000315869 hDV103S1A0JD37 113 aa9.33□□□□□ -0.92
TFE3-201ENST00000315869 IGLV9-49A0A0B4J1Y8 123 aa9.31□□□□□ -0.92
TFE3-201ENST00000315869 B9D2Q9BPU9 175 aa9.31□□□□□ -0.92
TFE3-201ENST00000315869 PLECQ15149 4684 aaKnown RBP9.31□□□□□ -0.92
TFE3-201ENST00000315869 H0Y9P7 68 aa9.31□□□□□ -0.92
TFE3-201ENST00000315869 FBN3Q75N90 2809 aa9.3□□□□□ -0.92
TFE3-201ENST00000315869 KRTAP11-1Q8IUC1 163 aa9.3□□□□□ -0.92
TFE3-201ENST00000315869 C1orf195Q5TG92 126 aa9.28□□□□□ -0.92
TFE3-201ENST00000315869 NDUFB1O75438 58 aa9.27□□□□□ -0.93
TFE3-201ENST00000315869 APLNQ9ULZ1 77 aa9.27□□□□□ -0.93
TFE3-201ENST00000315869 LY6G6CO95867 125 aa9.27□□□□□ -0.93
TFE3-201ENST00000315869 NDUFS5O43920 106 aa9.26□□□□□ -0.93
TFE3-201ENST00000315869 STARD9Q9P2P6 4700 aa9.26□□□□□ -0.93
TFE3-201ENST00000315869 ZCCHC13Q8WW36 166 aaKnown RBP9.25□□□□□ -0.93
TFE3-201ENST00000315869 C14orf177Q52M58 125 aa9.24□□□□□ -0.93
TFE3-201ENST00000315869 PRR15Q8IV56 129 aa9.24□□□□□ -0.93
TFE3-201ENST00000315869 PCOTHQ58A44 107 aa9.23□□□□□ -0.93
TFE3-201ENST00000315869 TRAV22A0A0B4J277 110 aa9.22□□□□□ -0.93
TFE3-201ENST00000315869 LCE6AA0A183 80 aa9.22□□□□□ -0.93
TFE3-201ENST00000315869 CNBPP62633 177 aaKnown RBP9.22□□□□□ -0.93
TFE3-201ENST00000315869 A8MUN3 132 aa9.21□□□□□ -0.93
TFE3-201ENST00000315869 A8MWP4 228 aa9.2□□□□□ -0.94
TFE3-201ENST00000315869 V9GYY9 64 aa9.2□□□□□ -0.94
TFE3-201ENST00000315869 PANO1I0J062 215 aa9.18□□□□□ -0.94
TFE3-201ENST00000315869 DNAH1Q9P2D7 4330 aa9.18□□□□□ -0.94
TFE3-201ENST00000315869 IGLV8-61A0A075B6I0 122 aa9.17□□□□□ -0.94
TFE3-201ENST00000315869 CDK2AP2O75956 126 aa9.17□□□□□ -0.94
TFE3-201ENST00000315869 C9orf163Q8N9P6 203 aa9.17□□□□□ -0.94
TFE3-201ENST00000315869 IGHV6-1A0A0B4J1U7 121 aa9.16□□□□□ -0.94
TFE3-201ENST00000315869 ANAPC11Q9NYG5 84 aa9.16□□□□□ -0.94
TFE3-201ENST00000315869 KRTAP29-1A8MX34 341 aaPredicted RBP9.15□□□□□ -0.94
TFE3-201ENST00000315869 LINC00472Q9H8W2 130 aa9.15□□□□□ -0.95
TFE3-201ENST00000315869 KMT2AQ03164 3969 aa9.15□□□□□ -0.95
TFE3-201ENST00000315869 CYP4F30PQ9H0H9 118 aa9.14□□□□□ -0.95
TFE3-201ENST00000315869 CHKB-CPT1BH3BT56 60 aa9.14□□□□□ -0.95
TFE3-201ENST00000315869 SPINK6Q6UWN8 80 aa9.14□□□□□ -0.95
TFE3-201ENST00000315869 Q1T7F1 81 aa9.13□□□□□ -0.95
TFE3-201ENST00000315869 NBDYA0A0U1RRE5 68 aa9.13□□□□□ -0.95
TFE3-201ENST00000315869 PRR15LQ9BU68 103 aa9.13□□□□□ -0.95
TFE3-201ENST00000315869 NUPR2A6NF83 97 aa9.12□□□□□ -0.95
TFE3-201ENST00000315869 SPTSSBQ8NFR3 76 aa9.11□□□□□ -0.95
TFE3-201ENST00000315869 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.11□□□□□ -0.95
TFE3-201ENST00000315869 MOBPQ13875 183 aa9.1□□□□□ -0.95
TFE3-201ENST00000315869 SEC61GP60059 68 aa9.1□□□□□ -0.95
TFE3-201ENST00000315869 MMP24-AS1A0A0U1RRL7 71 aa9.08□□□□□ -0.96
TFE3-201ENST00000315869 SPRR1BP22528 89 aa9.08□□□□□ -0.96
TFE3-201ENST00000315869 A8MU10 97 aa9.06□□□□□ -0.96
TFE3-201ENST00000315869 H3BPC8 53 aa9.05□□□□□ -0.96
TFE3-201ENST00000315869 COA5Q86WW8 74 aa9.05□□□□□ -0.96
TFE3-201ENST00000315869 A6NED7 52 aa9.03□□□□□ -0.96
TFE3-201ENST00000315869 C8orf17Q9NRJ1 99 aa9.03□□□□□ -0.96
TFE3-201ENST00000315869 PMAIP1Q13794 54 aa9.02□□□□□ -0.97
TFE3-201ENST00000315869 SPANXA2-OT1Q8N9U9 137 aa9.02□□□□□ -0.97
TFE3-201ENST00000315869 SPAG11AQ6PDA7 123 aa9.02□□□□□ -0.97
TFE3-201ENST00000315869 Q8N9P0 234 aaPredicted RBP9.01□□□□□ -0.97
TFE3-201ENST00000315869 Q5VV11 94 aa9□□□□□ -0.97
TFE3-201ENST00000315869 PSORS1C2Q9UIG4 136 aa9□□□□□ -0.97
TFE3-201ENST00000315869 Q6ZRN7 208 aaPredicted RBP8.99□□□□□ -0.97
TFE3-201ENST00000315869 LIMD2Q9BT23 127 aa8.99□□□□□ -0.97
TFE3-201ENST00000315869 CIRBP-AS1Q8TBR5 109 aa8.99□□□□□ -0.97
TFE3-201ENST00000315869 DYNC2H1Q8NCM8 4307 aaKnown RBP8.98□□□□□ -0.97
TFE3-201ENST00000315869 VPS13DQ5THJ4 4388 aa8.97□□□□□ -0.97
TFE3-201ENST00000315869 CD164Q04900 197 aa8.97□□□□□ -0.97
TFE3-201ENST00000315869 ZNF706Q9Y5V0 76 aaPredicted RBP8.97□□□□□ -0.97
TFE3-201ENST00000315869 A0A1B0GVX0 72 aa8.96□□□□□ -0.97
TFE3-201ENST00000315869 RTL8CO15255 209 aa8.96□□□□□ -0.97
TFE3-201ENST00000315869 SPACA4Q8TDM5 124 aa8.96□□□□□ -0.98
TFE3-201ENST00000315869 TP53AIP1Q9HCN2 124 aa8.96□□□□□ -0.98
TFE3-201ENST00000315869 A0A087X002 238 aa8.96□□□□□ -0.98
TFE3-201ENST00000315869 NOTCH2NLQ7Z3S9 236 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms