RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 F8WEM9 126 aa11.32□□□□□ -0.6
CCDC43-201ENST00000315286 CXCL6P80162 114 aa11.32□□□□□ -0.6
CCDC43-201ENST00000315286 Q8NBF4 154 aa11.32□□□□□ -0.6
CCDC43-201ENST00000315286 CCDC179H3BU77 68 aa11.31□□□□□ -0.6
CCDC43-201ENST00000315286 SCXQ7RTU7 201 aa11.31□□□□□ -0.6
CCDC43-201ENST00000315286 PLAC8Q9NZF1 115 aa11.31□□□□□ -0.6
CCDC43-201ENST00000315286 HYDINQ4G0P3 5121 aa11.31□□□□□ -0.6
CCDC43-201ENST00000315286 NREPQ16612 68 aa11.31□□□□□ -0.6
CCDC43-201ENST00000315286 DNAH11Q96DT5 4516 aa11.3□□□□□ -0.6
CCDC43-201ENST00000315286 A0A0G2JQZ4 141 aa11.3□□□□□ -0.6
CCDC43-201ENST00000315286 SPRR1BP22528 89 aa11.29□□□□□ -0.6
CCDC43-201ENST00000315286 A0A1B0GW54 56 aa11.28□□□□□ -0.6
CCDC43-201ENST00000315286 ATOX1O00244 68 aa11.28□□□□□ -0.6
CCDC43-201ENST00000315286 SPRR4Q96PI1 79 aa11.28□□□□□ -0.6
CCDC43-201ENST00000315286 DNAH5Q8TE73 4624 aa11.28□□□□□ -0.6
CCDC43-201ENST00000315286 IGFL1Q6UW32 110 aa11.28□□□□□ -0.6
CCDC43-201ENST00000315286 IGLV8-61A0A075B6I0 122 aa11.27□□□□□ -0.61
CCDC43-201ENST00000315286 KRTAP10-2P60368 255 aa11.26□□□□□ -0.61
CCDC43-201ENST00000315286 PSORS1C2Q9UIG4 136 aa11.26□□□□□ -0.61
CCDC43-201ENST00000315286 CRYGAP11844 174 aa11.24□□□□□ -0.61
CCDC43-201ENST00000315286 FAT2Q9NYQ8 4349 aa11.23□□□□□ -0.61
CCDC43-201ENST00000315286 BPY2O14599 106 aa11.21□□□□□ -0.62
CCDC43-201ENST00000315286 PKD1P98161 4303 aa11.2□□□□□ -0.62
CCDC43-201ENST00000315286 Q8N9L7 120 aa11.2□□□□□ -0.62
CCDC43-201ENST00000315286 FAM30AQ9NZY2 134 aa11.19□□□□□ -0.62
CCDC43-201ENST00000315286 COX7CP15954 63 aa11.18□□□□□ -0.62
CCDC43-201ENST00000315286 UQCRQO14949 82 aa11.17□□□□□ -0.62
CCDC43-201ENST00000315286 SERP2Q8N6R1 65 aa11.16□□□□□ -0.62
CCDC43-201ENST00000315286 IGKV4-1P06312 121 aa11.15□□□□□ -0.62
CCDC43-201ENST00000315286 ZNF861PO60384 105 aa11.15□□□□□ -0.63
CCDC43-201ENST00000315286 CIRBP-AS1Q8TBR5 109 aa11.14□□□□□ -0.63
CCDC43-201ENST00000315286 SACSQ9NZJ4 4579 aa11.13□□□□□ -0.63
CCDC43-201ENST00000315286 A0A087WSZ3 146 aa11.13□□□□□ -0.63
CCDC43-201ENST00000315286 LINC00483Q53H64 154 aa11.12□□□□□ -0.63
CCDC43-201ENST00000315286 KRTAP10-1P60331 282 aa11.11□□□□□ -0.63
CCDC43-201ENST00000315286 C9orf153Q5TBE3 101 aa11.1□□□□□ -0.63
CCDC43-201ENST00000315286 ZNF706Q9Y5V0 76 aaPredicted RBP11.1□□□□□ -0.63
CCDC43-201ENST00000315286 IGLV9-49A0A0B4J1Y8 123 aa11.1□□□□□ -0.63
CCDC43-201ENST00000315286 DSCR10P59022 87 aa11.09□□□□□ -0.63
CCDC43-201ENST00000315286 IGLV7-43P04211 117 aa11.08□□□□□ -0.63
CCDC43-201ENST00000315286 Q6ZSA8 131 aa11.08□□□□□ -0.64
CCDC43-201ENST00000315286 ANAPC11Q9NYG5 84 aa11.07□□□□□ -0.64
CCDC43-201ENST00000315286 DEFB116Q30KQ4 102 aa11.06□□□□□ -0.64
CCDC43-201ENST00000315286 LRP1BQ9NZR2 4599 aa11.04□□□□□ -0.64
CCDC43-201ENST00000315286 TRAV7A0A075B6U4 112 aa11.03□□□□□ -0.64
CCDC43-201ENST00000315286 K7EQZ3 153 aa11.03□□□□□ -0.64
CCDC43-201ENST00000315286 SMIM20Q8N5G0 67 aa11.01□□□□□ -0.65
CCDC43-201ENST00000315286 MOBPQ13875 183 aa11□□□□□ -0.65
CCDC43-201ENST00000315286 CYSTM1Q9H1C7 97 aa11□□□□□ -0.65
CCDC43-201ENST00000315286 RPL37AP61513 92 aaKnown RBP10.99□□□□□ -0.65
CCDC43-201ENST00000315286 SS18L2Q9UHA2 77 aa10.99□□□□□ -0.65
CCDC43-201ENST00000315286 LINC00472Q9H8W2 130 aa10.97□□□□□ -0.65
CCDC43-201ENST00000315286 LCE6AA0A183 80 aa10.97□□□□□ -0.65
CCDC43-201ENST00000315286 HRCT1Q6UXD1 115 aa10.96□□□□□ -0.65
CCDC43-201ENST00000315286 PKHD1P08F94 4074 aa10.95□□□□□ -0.66
CCDC43-201ENST00000315286 C20orf197Q8N268 126 aa10.94□□□□□ -0.66
CCDC43-201ENST00000315286 OCR1Q9BZK8 76 aa10.93□□□□□ -0.66
CCDC43-201ENST00000315286 VPS13BQ7Z7G8 4022 aa10.9□□□□□ -0.66
CCDC43-201ENST00000315286 HCG22E2RYF7 251 aa10.89□□□□□ -0.67
CCDC43-201ENST00000315286 LINC00336Q6ZUF6 198 aa10.88□□□□□ -0.67
CCDC43-201ENST00000315286 A8MWP4 228 aa10.88□□□□□ -0.67
CCDC43-201ENST00000315286 Q96NJ1 140 aa10.87□□□□□ -0.67
CCDC43-201ENST00000315286 PRR15Q8IV56 129 aa10.86□□□□□ -0.67
CCDC43-201ENST00000315286 WFDC13Q8IUB5 93 aa10.85□□□□□ -0.67
CCDC43-201ENST00000315286 SNURFQ9Y675 71 aa10.85□□□□□ -0.67
CCDC43-201ENST00000315286 J3KT08 172 aa10.84□□□□□ -0.67
CCDC43-201ENST00000315286 DYNC1H1Q14204 4646 aaKnown RBP10.84□□□□□ -0.67
CCDC43-201ENST00000315286 KLKP1Q107X0 134 aa10.83□□□□□ -0.68
CCDC43-201ENST00000315286 RYR2Q92736 4967 aa10.83□□□□□ -0.68
CCDC43-201ENST00000315286 A0A087X002 238 aa10.81□□□□□ -0.68
CCDC43-201ENST00000315286 SSBP3-AS1Q7Z2R9 100 aa10.81□□□□□ -0.68
CCDC43-201ENST00000315286 A0A1B0GVY2 172 aa10.8□□□□□ -0.68
CCDC43-201ENST00000315286 KRTAP29-1A8MX34 341 aaPredicted RBP10.8□□□□□ -0.68
CCDC43-201ENST00000315286 TMEM254Q8TBM7 123 aa10.8□□□□□ -0.68
CCDC43-201ENST00000315286 KMT2CQ8NEZ4 4911 aaKnown RBP10.79□□□□□ -0.68
CCDC43-201ENST00000315286 TMEM258P61165 79 aa10.78□□□□□ -0.68
CCDC43-201ENST00000315286 NDUFB1O75438 58 aa10.77□□□□□ -0.69
CCDC43-201ENST00000315286 KRTAP13-2Q52LG2 175 aa10.77□□□□□ -0.69
CCDC43-201ENST00000315286 CASC2Q6XLA1 102 aa10.77□□□□□ -0.69
CCDC43-201ENST00000315286 H7BZZ5 65 aa10.77□□□□□ -0.69
CCDC43-201ENST00000315286 KRTAP1-4P0C5Y4 121 aa10.76□□□□□ -0.69
CCDC43-201ENST00000315286 CD164Q04900 197 aa10.76□□□□□ -0.69
CCDC43-201ENST00000315286 FAM229BQ4G0N7 80 aa10.75□□□□□ -0.69
CCDC43-201ENST00000315286 A0A0U1RQV1 116 aa10.73□□□□□ -0.69
CCDC43-201ENST00000315286 MMP24-AS1A0A0U1RRL7 71 aa10.73□□□□□ -0.69
CCDC43-201ENST00000315286 APOBP04114 4563 aaKnown RBP10.7□□□□□ -0.7
CCDC43-201ENST00000315286 SMR3BP02814 79 aaPredicted RBP10.69□□□□□ -0.7
CCDC43-201ENST00000315286 A0A1B0GVX0 72 aa10.69□□□□□ -0.7
CCDC43-201ENST00000315286 IGHV6-1A0A0B4J1U7 121 aa10.68□□□□□ -0.7
CCDC43-201ENST00000315286 hDV103S1A0JD37 113 aa10.68□□□□□ -0.7
CCDC43-201ENST00000315286 NDUFC1O43677 76 aa10.68□□□□□ -0.7
CCDC43-201ENST00000315286 CDK2AP2O75956 126 aa10.68□□□□□ -0.7
CCDC43-201ENST00000315286 C5orf47Q569G3 176 aa10.68□□□□□ -0.7
CCDC43-201ENST00000315286 SPINK6Q6UWN8 80 aa10.68□□□□□ -0.7
CCDC43-201ENST00000315286 PLA2G1BP04054 148 aaKnown RBP10.67□□□□□ -0.7
CCDC43-201ENST00000315286 C8orf17Q9NRJ1 99 aa10.67□□□□□ -0.7
CCDC43-201ENST00000315286 FAT1Q14517 4588 aa10.65□□□□□ -0.7
CCDC43-201ENST00000315286 ASB16-AS1Q495Z4 193 aa10.65□□□□□ -0.7
CCDC43-201ENST00000315286 FAM236DA0A1B0GTK5 79 aa10.64□□□□□ -0.71
CCDC43-201ENST00000315286 FAM236CP0DP71 79 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms