RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 A0A0G2JQZ4 141 aa12.1□□□□□ -0.47
HERPUD2-201ENST00000311350 A0A1W2PNN7 141 aa12.1□□□□□ -0.47
HERPUD2-201ENST00000311350 PSCAO43653 123 aa12.09□□□□□ -0.47
HERPUD2-201ENST00000311350 STAB2Q8WWQ8 2551 aa12.09□□□□□ -0.47
HERPUD2-201ENST00000311350 TENM3Q9P273 2699 aa12.09□□□□□ -0.47
HERPUD2-201ENST00000311350 Q8NBF4 154 aa12.08□□□□□ -0.48
HERPUD2-201ENST00000311350 KRTAP4-16G5E9R7 235 aaPredicted RBP12.08□□□□□ -0.48
HERPUD2-201ENST00000311350 SPRR1AP35321 89 aa12.08□□□□□ -0.48
HERPUD2-201ENST00000311350 TNP2Q05952 138 aa12.08□□□□□ -0.48
HERPUD2-201ENST00000311350 DEFB131BA0A096LNP1 70 aa12.07□□□□□ -0.48
HERPUD2-201ENST00000311350 Q6ZRX8 168 aa12.07□□□□□ -0.48
HERPUD2-201ENST00000311350 CYP4F30PQ9H0H9 118 aa12.05□□□□□ -0.48
HERPUD2-201ENST00000311350 FAM168BA1KXE4 195 aa12.04□□□□□ -0.48
HERPUD2-201ENST00000311350 IGLV1-50A0A075B6I6 118 aa12.03□□□□□ -0.48
HERPUD2-201ENST00000311350 HCG22E2RYF7 251 aa12.03□□□□□ -0.48
HERPUD2-201ENST00000311350 C11orf45Q8TAV5 145 aa12.03□□□□□ -0.48
HERPUD2-201ENST00000311350 SPRR4Q96PI1 79 aa12.02□□□□□ -0.48
HERPUD2-201ENST00000311350 WFDC13Q8IUB5 93 aa12.02□□□□□ -0.49
HERPUD2-201ENST00000311350 Q5VV11 94 aa12□□□□□ -0.49
HERPUD2-201ENST00000311350 KMT2CQ8NEZ4 4911 aaKnown RBP11.99□□□□□ -0.49
HERPUD2-201ENST00000311350 LINC00208Q96KT6 92 aa11.96□□□□□ -0.5
HERPUD2-201ENST00000311350 DNAH7Q8WXX0 4024 aa11.95□□□□□ -0.5
HERPUD2-201ENST00000311350 RPL37AP61513 92 aaKnown RBP11.94□□□□□ -0.5
HERPUD2-201ENST00000311350 CASC10Q5T4H9 136 aa11.94□□□□□ -0.5
HERPUD2-201ENST00000311350 KRTAP7-1Q8IUC3 87 aa11.93□□□□□ -0.5
HERPUD2-201ENST00000311350 MRPL55Q7Z7F7 128 aaKnown RBP11.93□□□□□ -0.5
HERPUD2-201ENST00000311350 LINC00476Q8WZB0 136 aa11.93□□□□□ -0.5
HERPUD2-201ENST00000311350 LINC00588Q9Y4M8 146 aa11.92□□□□□ -0.5
HERPUD2-201ENST00000311350 CHKB-CPT1BH3BT56 60 aa11.91□□□□□ -0.5
HERPUD2-201ENST00000311350 UBE2BP63146 152 aa11.91□□□□□ -0.5
HERPUD2-201ENST00000311350 NDUFB1O75438 58 aa11.9□□□□□ -0.5
HERPUD2-201ENST00000311350 MP68P56378 58 aa11.89□□□□□ -0.51
HERPUD2-201ENST00000311350 Q8N9P0 234 aaPredicted RBP11.89□□□□□ -0.51
HERPUD2-201ENST00000311350 C16orf90A8MZG2 172 aa11.88□□□□□ -0.51
HERPUD2-201ENST00000311350 IGFL1Q6UW32 110 aa11.87□□□□□ -0.51
HERPUD2-201ENST00000311350 PRR15LQ9BU68 103 aa11.87□□□□□ -0.51
HERPUD2-201ENST00000311350 REG3GQ6UW15 175 aa11.86□□□□□ -0.51
HERPUD2-201ENST00000311350 A0A087WSZ3 146 aa11.85□□□□□ -0.51
HERPUD2-201ENST00000311350 SPTSSBQ8NFR3 76 aa11.85□□□□□ -0.51
HERPUD2-201ENST00000311350 STARD9Q9P2P6 4700 aa11.85□□□□□ -0.51
HERPUD2-201ENST00000311350 CSMD3Q7Z407 3707 aa11.84□□□□□ -0.51
HERPUD2-201ENST00000311350 RYR3Q15413 4870 aa11.84□□□□□ -0.51
HERPUD2-201ENST00000311350 CD164Q04900 197 aa11.84□□□□□ -0.51
HERPUD2-201ENST00000311350 H0Y9P7 68 aa11.83□□□□□ -0.52
HERPUD2-201ENST00000311350 UBE2AP49459 152 aa11.82□□□□□ -0.52
HERPUD2-201ENST00000311350 IGLV8-61A0A075B6I0 122 aa11.81□□□□□ -0.52
HERPUD2-201ENST00000311350 KRTAP29-1A8MX34 341 aaPredicted RBP11.81□□□□□ -0.52
HERPUD2-201ENST00000311350 LCA10Q71F78 164 aa11.81□□□□□ -0.52
HERPUD2-201ENST00000311350 SRRM2Q9UQ35 2752 aaKnown RBP11.79□□□□□ -0.52
HERPUD2-201ENST00000311350 DNAH1Q9P2D7 4330 aa11.78□□□□□ -0.52
HERPUD2-201ENST00000311350 LIMD2Q9BT23 127 aa11.78□□□□□ -0.52
HERPUD2-201ENST00000311350 TENM2Q9NT68 2774 aa11.77□□□□□ -0.53
HERPUD2-201ENST00000311350 CASC2Q6XLA1 102 aa11.76□□□□□ -0.53
HERPUD2-201ENST00000311350 SPANXA2-OT1Q8N9U9 137 aa11.76□□□□□ -0.53
HERPUD2-201ENST00000311350 DYNC2H1Q8NCM8 4307 aaKnown RBP11.76□□□□□ -0.53
HERPUD2-201ENST00000311350 CNBPP62633 177 aaKnown RBP11.75□□□□□ -0.53
HERPUD2-201ENST00000311350 PRLHP81277 87 aa11.75□□□□□ -0.53
HERPUD2-201ENST00000311350 SACSQ9NZJ4 4579 aa11.75□□□□□ -0.53
HERPUD2-201ENST00000311350 KTN1-AS1Q86SY8 53 aa11.74□□□□□ -0.53
HERPUD2-201ENST00000311350 RBM12B-AS1Q9P1G2 102 aa11.73□□□□□ -0.53
HERPUD2-201ENST00000311350 A6NED7 52 aa11.72□□□□□ -0.53
HERPUD2-201ENST00000311350 C9orf163Q8N9P6 203 aa11.72□□□□□ -0.53
HERPUD2-201ENST00000311350 LYSTQ99698 3801 aa11.72□□□□□ -0.53
HERPUD2-201ENST00000311350 NUPR2A6NF83 97 aa11.71□□□□□ -0.53
HERPUD2-201ENST00000311350 COA5Q86WW8 74 aa11.71□□□□□ -0.53
HERPUD2-201ENST00000311350 RYR2Q92736 4967 aa11.71□□□□□ -0.54
HERPUD2-201ENST00000311350 A0A096LNI7 61 aa11.68□□□□□ -0.54
HERPUD2-201ENST00000311350 Q75L30 129 aa11.68□□□□□ -0.54
HERPUD2-201ENST00000311350 SPRR1BP22528 89 aa11.67□□□□□ -0.54
HERPUD2-201ENST00000311350 H0Y9J4 135 aa11.67□□□□□ -0.54
HERPUD2-201ENST00000311350 PLECQ15149 4684 aaKnown RBP11.67□□□□□ -0.54
HERPUD2-201ENST00000311350 ATP11AUNQ6ZP68 121 aa11.66□□□□□ -0.54
HERPUD2-201ENST00000311350 A6NN06 94 aa11.65□□□□□ -0.54
HERPUD2-201ENST00000311350 H3BPC8 53 aa11.65□□□□□ -0.54
HERPUD2-201ENST00000311350 PCOTHQ58A44 107 aa11.65□□□□□ -0.54
HERPUD2-201ENST00000311350 LOC101927531A0A1B0GV80 90 aa11.64□□□□□ -0.55
HERPUD2-201ENST00000311350 C14orf177Q52M58 125 aa11.63□□□□□ -0.55
HERPUD2-201ENST00000311350 A8MWP4 228 aa11.62□□□□□ -0.55
HERPUD2-201ENST00000311350 SPAG11AQ6PDA7 123 aa11.61□□□□□ -0.55
HERPUD2-201ENST00000311350 LINC00472Q9H8W2 130 aa11.61□□□□□ -0.55
HERPUD2-201ENST00000311350 IGLV7-46A0A075B6I9 117 aa11.6□□□□□ -0.55
HERPUD2-201ENST00000311350 ALMS1Q8TCU4 4167 aa11.59□□□□□ -0.55
HERPUD2-201ENST00000311350 IGKV2-24A0A0C4DH68 120 aa11.59□□□□□ -0.55
HERPUD2-201ENST00000311350 LY6G6CO95867 125 aa11.59□□□□□ -0.55
HERPUD2-201ENST00000311350 HYDINQ4G0P3 5121 aa11.58□□□□□ -0.56
HERPUD2-201ENST00000311350 KRTAP1-5Q9BYS1 174 aa11.58□□□□□ -0.56
HERPUD2-201ENST00000311350 DNAH10Q8IVF4 4471 aa11.58□□□□□ -0.56
HERPUD2-201ENST00000311350 CDC42SE1Q9NRR8 79 aa11.57□□□□□ -0.56
HERPUD2-201ENST00000311350 MMP24-AS1A0A0U1RRL7 71 aa11.56□□□□□ -0.56
HERPUD2-201ENST00000311350 MOBPQ13875 183 aa11.55□□□□□ -0.56
HERPUD2-201ENST00000311350 KRTAP11-1Q8IUC1 163 aa11.55□□□□□ -0.56
HERPUD2-201ENST00000311350 PHF5AQ7RTV0 110 aaKnown RBP11.54□□□□□ -0.56
HERPUD2-201ENST00000311350 NDUFS5O43920 106 aa11.53□□□□□ -0.56
HERPUD2-201ENST00000311350 SPINK7P58062 85 aa11.53□□□□□ -0.56
HERPUD2-201ENST00000311350 APLNQ9ULZ1 77 aa11.51□□□□□ -0.57
HERPUD2-201ENST00000311350 LINC01558Q9Y6Z2 57 aa11.5□□□□□ -0.57
HERPUD2-201ENST00000311350 PLAC8Q9NZF1 115 aa11.49□□□□□ -0.57
HERPUD2-201ENST00000311350 UBE2DNLQ8IWF7 75 aa11.47□□□□□ -0.57
HERPUD2-201ENST00000311350 KMT2AQ03164 3969 aa11.46□□□□□ -0.58
HERPUD2-201ENST00000311350 C7orf65Q6ZTY9 151 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms