RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 ZZEF1O43149 2961 aa9.97□□□□□ -0.81
LEMD3-201ENST00000308330 PLA2G1BP04054 148 aaKnown RBP9.97□□□□□ -0.81
LEMD3-201ENST00000308330 Q6ZRX8 168 aa9.97□□□□□ -0.81
LEMD3-201ENST00000308330 RTL8CO15255 209 aa9.97□□□□□ -0.81
LEMD3-201ENST00000308330 CRIPTQ9P021 101 aa9.97□□□□□ -0.81
LEMD3-201ENST00000308330 DNAH10OSP0CZ25 163 aa9.97□□□□□ -0.81
LEMD3-201ENST00000308330 FREM2Q5SZK8 3169 aa9.95□□□□□ -0.82
LEMD3-201ENST00000308330 FAM229AH3BQW9 127 aa9.94□□□□□ -0.82
LEMD3-201ENST00000308330 IGKV2D-30A0A075B6S6 120 aa9.94□□□□□ -0.82
LEMD3-201ENST00000308330 IGKV2-30P06310 120 aa9.94□□□□□ -0.82
LEMD3-201ENST00000308330 EYSQ5T1H1 3165 aa9.94□□□□□ -0.82
LEMD3-201ENST00000308330 CR1P17927 2039 aa9.93□□□□□ -0.82
LEMD3-201ENST00000308330 DMAC1Q96GE9 116 aa9.92□□□□□ -0.82
LEMD3-201ENST00000308330 HIVEP1P15822 2718 aa9.91□□□□□ -0.82
LEMD3-201ENST00000308330 NBEAL2Q6ZNJ1 2754 aa9.91□□□□□ -0.82
LEMD3-201ENST00000308330 A0A1W2PNM2 257 aa9.91□□□□□ -0.82
LEMD3-201ENST00000308330 STAB2Q8WWQ8 2551 aa9.91□□□□□ -0.82
LEMD3-201ENST00000308330 CHTF8P0CG12 524 aa9.91□□□□□ -0.82
LEMD3-201ENST00000308330 Q8N377 158 aa9.91□□□□□ -0.82
LEMD3-201ENST00000308330 ADGRG4Q8IZF6 3080 aa9.9□□□□□ -0.82
LEMD3-201ENST00000308330 LUZP6Q538Z0 58 aa9.9□□□□□ -0.83
LEMD3-201ENST00000308330 DSCR10P59022 87 aa9.88□□□□□ -0.83
LEMD3-201ENST00000308330 MRPL34Q9BQ48 92 aaKnown RBP9.88□□□□□ -0.83
LEMD3-201ENST00000308330 KALRNO60229 2985 aa9.87□□□□□ -0.83
LEMD3-201ENST00000308330 TENM4Q6N022 2769 aa9.86□□□□□ -0.83
LEMD3-201ENST00000308330 GVQW2A0A096LPI5 108 aaPredicted RBP9.85□□□□□ -0.83
LEMD3-201ENST00000308330 ADM2Q7Z4H4 148 aa9.85□□□□□ -0.83
LEMD3-201ENST00000308330 NBEAQ8NFP9 2946 aa9.84□□□□□ -0.83
LEMD3-201ENST00000308330 LINC00612Q8N6U2 182 aa9.83□□□□□ -0.84
LEMD3-201ENST00000308330 IGFL1Q6UW32 110 aa9.82□□□□□ -0.84
LEMD3-201ENST00000308330 IGLV5-48A0A075B6I7 105 aa9.82□□□□□ -0.84
LEMD3-201ENST00000308330 DMXL1Q9Y485 3027 aa9.81□□□□□ -0.84
LEMD3-201ENST00000308330 C8orf17Q9NRJ1 99 aa9.79□□□□□ -0.84
LEMD3-201ENST00000308330 FAM104AQ969W3 186 aa9.79□□□□□ -0.84
LEMD3-201ENST00000308330 HRES1P13985 223 aa9.78□□□□□ -0.84
LEMD3-201ENST00000308330 APLNQ9ULZ1 77 aa9.78□□□□□ -0.84
LEMD3-201ENST00000308330 UTP20O75691 2785 aaKnown RBP9.78□□□□□ -0.84
LEMD3-201ENST00000308330 PRR34Q9NV39 138 aa9.78□□□□□ -0.84
LEMD3-201ENST00000308330 ZCCHC13Q8WW36 166 aaKnown RBP9.77□□□□□ -0.85
LEMD3-201ENST00000308330 SPACA4Q8TDM5 124 aa9.76□□□□□ -0.85
LEMD3-201ENST00000308330 A0A087WTM6 91 aa9.76□□□□□ -0.85
LEMD3-201ENST00000308330 KMT2BQ9UMN6 2715 aaPredicted RBP9.76□□□□□ -0.85
LEMD3-201ENST00000308330 DNAH14Q0VDD8 3507 aa9.73□□□□□ -0.85
LEMD3-201ENST00000308330 FAM168BA1KXE4 195 aa9.72□□□□□ -0.85
LEMD3-201ENST00000308330 APCP25054 2843 aa9.72□□□□□ -0.85
LEMD3-201ENST00000308330 ROMO1P60602 79 aa9.72□□□□□ -0.85
LEMD3-201ENST00000308330 A0A0G2JQZ4 141 aa9.72□□□□□ -0.85
LEMD3-201ENST00000308330 A0A1W2PNN7 141 aa9.72□□□□□ -0.85
LEMD3-201ENST00000308330 SMR3BP02814 79 aaPredicted RBP9.72□□□□□ -0.85
LEMD3-201ENST00000308330 TLX1NBP0CAT3 122 aa9.71□□□□□ -0.85
LEMD3-201ENST00000308330 SPRR4Q96PI1 79 aa9.71□□□□□ -0.86
LEMD3-201ENST00000308330 TYMSOSQ8TAI1 123 aa9.71□□□□□ -0.86
LEMD3-201ENST00000308330 J3QL48 77 aa9.7□□□□□ -0.86
LEMD3-201ENST00000308330 C15orf56Q8N910 161 aa9.69□□□□□ -0.86
LEMD3-201ENST00000308330 CFAP47Q6ZTR5 3102 aa9.68□□□□□ -0.86
LEMD3-201ENST00000308330 CRYBG3Q68DQ2 2970 aa9.67□□□□□ -0.86
LEMD3-201ENST00000308330 CASC10Q5T4H9 136 aa9.66□□□□□ -0.86
LEMD3-201ENST00000308330 DMBT1Q9UGM3 2413 aaPredicted RBP9.66□□□□□ -0.86
LEMD3-201ENST00000308330 ZANQ9Y493 2812 aa9.66□□□□□ -0.86
LEMD3-201ENST00000308330 A0A1B0GVX0 72 aa9.66□□□□□ -0.86
LEMD3-201ENST00000308330 LRBAP50851 2863 aa9.64□□□□□ -0.87
LEMD3-201ENST00000308330 NDUFAF8A1L188 74 aa9.63□□□□□ -0.87
LEMD3-201ENST00000308330 CELSR2Q9HCU4 2923 aa9.63□□□□□ -0.87
LEMD3-201ENST00000308330 KRTAP25-1Q3LHN0 102 aa9.63□□□□□ -0.87
LEMD3-201ENST00000308330 IGLV1-50A0A075B6I6 118 aa9.62□□□□□ -0.87
LEMD3-201ENST00000308330 SPATA8Q6RVD6 105 aa9.62□□□□□ -0.87
LEMD3-201ENST00000308330 NIPBLQ6KC79 2804 aaeCLIP9.61□□□□□ -0.87
LEMD3-201ENST00000308330 A0A087X002 238 aa9.61□□□□□ -0.87
LEMD3-201ENST00000308330 TNP2Q05952 138 aa9.6□□□□□ -0.87
LEMD3-201ENST00000308330 CNBPP62633 177 aaKnown RBP9.59□□□□□ -0.87
LEMD3-201ENST00000308330 SPEGQ15772 3267 aa9.58□□□□□ -0.88
LEMD3-201ENST00000308330 Q6ZR54 194 aa9.58□□□□□ -0.88
LEMD3-201ENST00000308330 ASH1LQ9NR48 2969 aaKnown RBP9.57□□□□□ -0.88
LEMD3-201ENST00000308330 LCE6AA0A183 80 aa9.57□□□□□ -0.88
LEMD3-201ENST00000308330 SEC61BP60468 96 aaKnown RBP9.57□□□□□ -0.88
LEMD3-201ENST00000308330 SPTBN5Q9NRC6 3674 aaKnown RBP9.54□□□□□ -0.88
LEMD3-201ENST00000308330 ZNF861PO60384 105 aa9.54□□□□□ -0.88
LEMD3-201ENST00000308330 A0A1B0GU33 70 aa9.54□□□□□ -0.88
LEMD3-201ENST00000308330 DCHS2Q6V1P9 2916 aa9.5□□□□□ -0.89
LEMD3-201ENST00000308330 PSORS1C2Q9UIG4 136 aa9.49□□□□□ -0.89
LEMD3-201ENST00000308330 MMP24-AS1A0A0U1RRL7 71 aa9.48□□□□□ -0.89
LEMD3-201ENST00000308330 LOC400499M0QZD8 3231 aa9.48□□□□□ -0.89
LEMD3-201ENST00000308330 USP34Q70CQ2 3546 aa9.48□□□□□ -0.89
LEMD3-201ENST00000308330 IGLV7-43P04211 117 aa9.47□□□□□ -0.89
LEMD3-201ENST00000308330 ANAPC11Q9NYG5 84 aa9.47□□□□□ -0.89
LEMD3-201ENST00000308330 Q8NDZ9 215 aa9.46□□□□□ -0.89
LEMD3-201ENST00000308330 NF1P21359 2839 aa9.45□□□□□ -0.9
LEMD3-201ENST00000308330 LINC00304Q8N9R0 145 aa9.43□□□□□ -0.9
LEMD3-201ENST00000308330 A0A0D9SG42 100 aa9.43□□□□□ -0.9
LEMD3-201ENST00000308330 IGLV5-37A0A075B6J1 123 aa9.42□□□□□ -0.9
LEMD3-201ENST00000308330 PLA2G2DQ9UNK4 145 aa9.41□□□□□ -0.9
LEMD3-201ENST00000308330 Q96NJ1 140 aa9.39□□□□□ -0.91
LEMD3-201ENST00000308330 FLG2Q5D862 2391 aaPredicted RBP9.36□□□□□ -0.91
LEMD3-201ENST00000308330 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.36□□□□□ -0.91
LEMD3-201ENST00000308330 C20orf166-AS1Q96NR2 134 aa9.35□□□□□ -0.91
LEMD3-201ENST00000308330 MYO15AQ9UKN7 3530 aa9.34□□□□□ -0.91
LEMD3-201ENST00000308330 KRTAP29-1A8MX34 341 aaPredicted RBP9.34□□□□□ -0.91
LEMD3-201ENST00000308330 Q8N1X5 172 aa9.34□□□□□ -0.91
LEMD3-201ENST00000308330 KRTAP1-5Q9BYS1 174 aa9.31□□□□□ -0.92
LEMD3-201ENST00000308330 A8MUU9 505 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms