RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 BCE1O60756 84 aa7.36□□□□□ -1.23
TRIM40-205ENST00000307859 KRTAP10-2P60368 255 aa7.35□□□□□ -1.23
TRIM40-205ENST00000307859 KRTAP13-1Q8IUC0 172 aa7.35□□□□□ -1.23
TRIM40-205ENST00000307859 FAT2Q9NYQ8 4349 aa7.35□□□□□ -1.23
TRIM40-205ENST00000307859 HIGD2AQ9BW72 106 aa7.34□□□□□ -1.23
TRIM40-205ENST00000307859 CDK2AP2O75956 126 aa7.34□□□□□ -1.24
TRIM40-205ENST00000307859 UBE2AP49459 152 aa7.33□□□□□ -1.24
TRIM40-205ENST00000307859 C3orf22Q8N5N4 141 aa7.33□□□□□ -1.24
TRIM40-205ENST00000307859 PKD1P98161 4303 aa7.33□□□□□ -1.24
TRIM40-205ENST00000307859 HSPG2P98160 4391 aa7.32□□□□□ -1.24
TRIM40-205ENST00000307859 TRBV7-7A0A0K0K1E9 115 aa7.32□□□□□ -1.24
TRIM40-205ENST00000307859 Q6Q795 121 aa7.32□□□□□ -1.24
TRIM40-205ENST00000307859 SMIM29Q86T20 159 aa7.32□□□□□ -1.24
TRIM40-205ENST00000307859 Q8N1X5 172 aa7.31□□□□□ -1.24
TRIM40-205ENST00000307859 SPRR1BP22528 89 aa7.3□□□□□ -1.24
TRIM40-205ENST00000307859 Q6JHZ5 121 aa7.3□□□□□ -1.24
TRIM40-205ENST00000307859 DMBT1Q9UGM3 2413 aaPredicted RBP7.3□□□□□ -1.24
TRIM40-205ENST00000307859 Q6ZSA8 131 aa7.3□□□□□ -1.24
TRIM40-205ENST00000307859 IMUPQ9GZP8 106 aa7.29□□□□□ -1.24
TRIM40-205ENST00000307859 PSORS1C2Q9UIG4 136 aa7.29□□□□□ -1.24
TRIM40-205ENST00000307859 UBR4Q5T4S7 5183 aa7.28□□□□□ -1.24
TRIM40-205ENST00000307859 UBL5Q9BZL1 73 aa7.28□□□□□ -1.24
TRIM40-205ENST00000307859 FAM30AQ9NZY2 134 aa7.27□□□□□ -1.25
TRIM40-205ENST00000307859 IGLV8-61A0A075B6I0 122 aa7.27□□□□□ -1.25
TRIM40-205ENST00000307859 F8WEM9 126 aa7.27□□□□□ -1.25
TRIM40-205ENST00000307859 KRTAP10-1P60331 282 aa7.27□□□□□ -1.25
TRIM40-205ENST00000307859 C1orf137Q5JT78 98 aa7.27□□□□□ -1.25
TRIM40-205ENST00000307859 ATP5EP2Q5VTU8 51 aa7.26□□□□□ -1.25
TRIM40-205ENST00000307859 CIRBP-AS1Q8TBR5 109 aa7.26□□□□□ -1.25
TRIM40-205ENST00000307859 A0A1B0GW54 56 aa7.25□□□□□ -1.25
TRIM40-205ENST00000307859 Q6ZVQ6 151 aa7.25□□□□□ -1.25
TRIM40-205ENST00000307859 A0A1W2PNM2 257 aa7.24□□□□□ -1.25
TRIM40-205ENST00000307859 Q8NBF4 154 aa7.24□□□□□ -1.25
TRIM40-205ENST00000307859 IGKV3D-7A0A0C4DH55 119 aa7.23□□□□□ -1.25
TRIM40-205ENST00000307859 SCXQ7RTU7 201 aa7.23□□□□□ -1.25
TRIM40-205ENST00000307859 SRRM2Q9UQ35 2752 aaKnown RBP7.23□□□□□ -1.25
TRIM40-205ENST00000307859 ZNF861PO60384 105 aa7.23□□□□□ -1.25
TRIM40-205ENST00000307859 SPRR4Q96PI1 79 aa7.23□□□□□ -1.25
TRIM40-205ENST00000307859 LINC00483Q53H64 154 aa7.22□□□□□ -1.25
TRIM40-205ENST00000307859 IGFL1Q6UW32 110 aa7.22□□□□□ -1.25
TRIM40-205ENST00000307859 ZNF706Q9Y5V0 76 aaPredicted RBP7.21□□□□□ -1.26
TRIM40-205ENST00000307859 IGLV7-43P04211 117 aa7.2□□□□□ -1.26
TRIM40-205ENST00000307859 CRYGAP11844 174 aa7.19□□□□□ -1.26
TRIM40-205ENST00000307859 CXCL6P80162 114 aa7.19□□□□□ -1.26
TRIM40-205ENST00000307859 HAMPP81172 84 aa7.17□□□□□ -1.26
TRIM40-205ENST00000307859 A0A0G2JQZ4 141 aa7.16□□□□□ -1.26
TRIM40-205ENST00000307859 FAM236AA0A1B0GUQ0 79 aa7.16□□□□□ -1.26
TRIM40-205ENST00000307859 FAM236BA0A1B0GV22 79 aa7.16□□□□□ -1.26
TRIM40-205ENST00000307859 HIST1H4AP62805 103 aaKnown RBP7.16□□□□□ -1.26
TRIM40-205ENST00000307859 NREPQ16612 68 aa7.16□□□□□ -1.26
TRIM40-205ENST00000307859 LRP1BQ9NZR2 4599 aa7.16□□□□□ -1.26
TRIM40-205ENST00000307859 APOBP04114 4563 aaKnown RBP7.14□□□□□ -1.27
TRIM40-205ENST00000307859 A0A087WVE0 104 aa7.14□□□□□ -1.27
TRIM40-205ENST00000307859 RPL37AP61513 92 aaKnown RBP7.13□□□□□ -1.27
TRIM40-205ENST00000307859 ANAPC13Q9BS18 74 aa7.13□□□□□ -1.27
TRIM40-205ENST00000307859 IGLV9-49A0A0B4J1Y8 123 aa7.11□□□□□ -1.27
TRIM40-205ENST00000307859 BPY2O14599 106 aa7.11□□□□□ -1.27
TRIM40-205ENST00000307859 C9orf153Q5TBE3 101 aa7.11□□□□□ -1.27
TRIM40-205ENST00000307859 A0A087WSZ3 146 aa7.09□□□□□ -1.27
TRIM40-205ENST00000307859 ANAPC11Q9NYG5 84 aa7.09□□□□□ -1.28
TRIM40-205ENST00000307859 ATOX1O00244 68 aa7.08□□□□□ -1.28
TRIM40-205ENST00000307859 MOBPQ13875 183 aa7.08□□□□□ -1.28
TRIM40-205ENST00000307859 IGKV4-1P06312 121 aa7.07□□□□□ -1.28
TRIM40-205ENST00000307859 VPS13BQ7Z7G8 4022 aa7.05□□□□□ -1.28
TRIM40-205ENST00000307859 DSCR10P59022 87 aa7.05□□□□□ -1.28
TRIM40-205ENST00000307859 Q8N9L7 120 aa7.05□□□□□ -1.28
TRIM40-205ENST00000307859 J3QL48 77 aa7.03□□□□□ -1.28
TRIM40-205ENST00000307859 FAM229BQ4G0N7 80 aa7.03□□□□□ -1.28
TRIM40-205ENST00000307859 LINC00472Q9H8W2 130 aa7.02□□□□□ -1.29
TRIM40-205ENST00000307859 FLG2Q5D862 2391 aaPredicted RBP7.02□□□□□ -1.29
TRIM40-205ENST00000307859 MYCBP2O75592 4640 aa7.01□□□□□ -1.29
TRIM40-205ENST00000307859 KRTAP1-4P0C5Y4 121 aa7.01□□□□□ -1.29
TRIM40-205ENST00000307859 Q5VSD8 79 aa7.01□□□□□ -1.29
TRIM40-205ENST00000307859 SSBP3-AS1Q7Z2R9 100 aa7.01□□□□□ -1.29
TRIM40-205ENST00000307859 K7EQZ3 153 aa7□□□□□ -1.29
TRIM40-205ENST00000307859 A0A087X002 238 aa6.99□□□□□ -1.29
TRIM40-205ENST00000307859 CD164Q04900 197 aa6.99□□□□□ -1.29
TRIM40-205ENST00000307859 SVIPQ8NHG7 77 aa6.99□□□□□ -1.29
TRIM40-205ENST00000307859 SS18L2Q9UHA2 77 aa6.99□□□□□ -1.29
TRIM40-205ENST00000307859 CCDC179H3BU77 68 aa6.98□□□□□ -1.29
TRIM40-205ENST00000307859 DEFB116Q30KQ4 102 aa6.98□□□□□ -1.29
TRIM40-205ENST00000307859 KRTAP13-2Q52LG2 175 aa6.98□□□□□ -1.29
TRIM40-205ENST00000307859 HRCT1Q6UXD1 115 aa6.98□□□□□ -1.29
TRIM40-205ENST00000307859 SERP2Q8N6R1 65 aa6.98□□□□□ -1.29
TRIM40-205ENST00000307859 COX7CP15954 63 aa6.98□□□□□ -1.29
TRIM40-205ENST00000307859 SPINK6Q6UWN8 80 aa6.98□□□□□ -1.29
TRIM40-205ENST00000307859 Q96NJ1 140 aa6.98□□□□□ -1.29
TRIM40-205ENST00000307859 HMCN2Q8NDA2 5059 aa6.97□□□□□ -1.29
TRIM40-205ENST00000307859 J3KT08 172 aa6.97□□□□□ -1.29
TRIM40-205ENST00000307859 UQCRQO14949 82 aa6.97□□□□□ -1.29
TRIM40-205ENST00000307859 SMIM20Q8N5G0 67 aa6.96□□□□□ -1.3
TRIM40-205ENST00000307859 A8MWP4 228 aa6.95□□□□□ -1.3
TRIM40-205ENST00000307859 SMR3BP02814 79 aaPredicted RBP6.95□□□□□ -1.3
TRIM40-205ENST00000307859 KRTAP10-4P60372 401 aaPredicted RBP6.95□□□□□ -1.3
TRIM40-205ENST00000307859 FAT1Q14517 4588 aa6.94□□□□□ -1.3
TRIM40-205ENST00000307859 TRAV7A0A075B6U4 112 aa6.94□□□□□ -1.3
TRIM40-205ENST00000307859 KRTAP29-1A8MX34 341 aaPredicted RBP6.94□□□□□ -1.3
TRIM40-205ENST00000307859 PRR15Q8IV56 129 aa6.93□□□□□ -1.3
TRIM40-205ENST00000307859 HCG22E2RYF7 251 aa6.92□□□□□ -1.3
TRIM40-205ENST00000307859 PLA2G1BP04054 148 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms