RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 ERC2-IT1O76042 136 aa7.47□□□□□ -1.21
TPM3-202ENST00000302206 KRTAP11-1Q8IUC1 163 aa7.47□□□□□ -1.21
TPM3-202ENST00000302206 KRTAP4-5Q9BYR2 181 aa7.46□□□□□ -1.22
TPM3-202ENST00000302206 HERC1Q15751 4861 aa7.45□□□□□ -1.22
TPM3-202ENST00000302206 PRLHP81277 87 aa7.45□□□□□ -1.22
TPM3-202ENST00000302206 Q6Q795 121 aa7.45□□□□□ -1.22
TPM3-202ENST00000302206 ST20-AS1Q8NBB2 130 aa7.45□□□□□ -1.22
TPM3-202ENST00000302206 DEFB105AQ8NG35 78 aa7.45□□□□□ -1.22
TPM3-202ENST00000302206 PKD1P98161 4303 aa7.44□□□□□ -1.22
TPM3-202ENST00000302206 TRBV7-7A0A0K0K1E9 115 aa7.44□□□□□ -1.22
TPM3-202ENST00000302206 A0A1B0GVY2 172 aa7.44□□□□□ -1.22
TPM3-202ENST00000302206 KRTAP13-1Q8IUC0 172 aa7.44□□□□□ -1.22
TPM3-202ENST00000302206 IMUPQ9GZP8 106 aa7.44□□□□□ -1.22
TPM3-202ENST00000302206 LINC00846Q9NV44 126 aa7.44□□□□□ -1.22
TPM3-202ENST00000302206 FUSP35637 526 aaKnown RBP eCLIP7.43□□□□□ -1.22
TPM3-202ENST00000302206 UBE2AP49459 152 aa7.43□□□□□ -1.22
TPM3-202ENST00000302206 A0A1B0GW54 56 aa7.42□□□□□ -1.22
TPM3-202ENST00000302206 SPRR1BP22528 89 aa7.42□□□□□ -1.22
TPM3-202ENST00000302206 Q6JHZ5 121 aa7.42□□□□□ -1.22
TPM3-202ENST00000302206 HIGD2AQ9BW72 106 aa7.42□□□□□ -1.22
TPM3-202ENST00000302206 HSPG2P98160 4391 aa7.41□□□□□ -1.22
TPM3-202ENST00000302206 KRTAP10-2P60368 255 aa7.41□□□□□ -1.22
TPM3-202ENST00000302206 SMIM29Q86T20 159 aa7.4□□□□□ -1.22
TPM3-202ENST00000302206 UBL5Q9BZL1 73 aa7.4□□□□□ -1.22
TPM3-202ENST00000302206 IGLV8-61A0A075B6I0 122 aa7.39□□□□□ -1.23
TPM3-202ENST00000302206 ATP5EP2Q5VTU8 51 aa7.39□□□□□ -1.23
TPM3-202ENST00000302206 F8WEM9 126 aa7.38□□□□□ -1.23
TPM3-202ENST00000302206 PCP4P48539 62 aa7.38□□□□□ -1.23
TPM3-202ENST00000302206 Q6ZSA8 131 aa7.38□□□□□ -1.23
TPM3-202ENST00000302206 LORP23490 312 aaPredicted RBP7.37□□□□□ -1.23
TPM3-202ENST00000302206 C3orf22Q8N5N4 141 aa7.37□□□□□ -1.23
TPM3-202ENST00000302206 PSORS1C2Q9UIG4 136 aa7.37□□□□□ -1.23
TPM3-202ENST00000302206 C1orf137Q5JT78 98 aa7.36□□□□□ -1.23
TPM3-202ENST00000302206 LRP1BQ9NZR2 4599 aa7.35□□□□□ -1.23
TPM3-202ENST00000302206 ZNF706Q9Y5V0 76 aaPredicted RBP7.35□□□□□ -1.23
TPM3-202ENST00000302206 Q6ZVQ6 151 aa7.34□□□□□ -1.23
TPM3-202ENST00000302206 Q8NBF4 154 aa7.34□□□□□ -1.23
TPM3-202ENST00000302206 ZNF861PO60384 105 aa7.33□□□□□ -1.24
TPM3-202ENST00000302206 KRTAP10-1P60331 282 aa7.33□□□□□ -1.24
TPM3-202ENST00000302206 CIRBP-AS1Q8TBR5 109 aa7.33□□□□□ -1.24
TPM3-202ENST00000302206 SPRR4Q96PI1 79 aa7.33□□□□□ -1.24
TPM3-202ENST00000302206 FAM30AQ9NZY2 134 aa7.33□□□□□ -1.24
TPM3-202ENST00000302206 A0A1W2PNM2 257 aa7.32□□□□□ -1.24
TPM3-202ENST00000302206 LINC00483Q53H64 154 aa7.32□□□□□ -1.24
TPM3-202ENST00000302206 DNAH5Q8TE73 4624 aa7.32□□□□□ -1.24
TPM3-202ENST00000302206 APOBP04114 4563 aaKnown RBP7.32□□□□□ -1.24
TPM3-202ENST00000302206 IGKV3D-7A0A0C4DH55 119 aa7.31□□□□□ -1.24
TPM3-202ENST00000302206 CXCL6P80162 114 aa7.31□□□□□ -1.24
TPM3-202ENST00000302206 CDK2AP2O75956 126 aa7.3□□□□□ -1.24
TPM3-202ENST00000302206 IGLV7-43P04211 117 aa7.3□□□□□ -1.24
TPM3-202ENST00000302206 CRYGAP11844 174 aa7.3□□□□□ -1.24
TPM3-202ENST00000302206 IGFL1Q6UW32 110 aa7.3□□□□□ -1.24
TPM3-202ENST00000302206 SCXQ7RTU7 201 aa7.3□□□□□ -1.24
TPM3-202ENST00000302206 RPL37AP61513 92 aaKnown RBP7.29□□□□□ -1.24
TPM3-202ENST00000302206 DMBT1Q9UGM3 2413 aaPredicted RBP7.28□□□□□ -1.24
TPM3-202ENST00000302206 Q8N1X5 172 aa7.28□□□□□ -1.24
TPM3-202ENST00000302206 DNAH8Q96JB1 4490 aa7.27□□□□□ -1.25
TPM3-202ENST00000302206 NREPQ16612 68 aa7.27□□□□□ -1.25
TPM3-202ENST00000302206 HIST1H4AP62805 103 aaKnown RBP7.26□□□□□ -1.25
TPM3-202ENST00000302206 HAMPP81172 84 aa7.26□□□□□ -1.25
TPM3-202ENST00000302206 FAM236AA0A1B0GUQ0 79 aa7.24□□□□□ -1.25
TPM3-202ENST00000302206 FAM236BA0A1B0GV22 79 aa7.24□□□□□ -1.25
TPM3-202ENST00000302206 ANAPC13Q9BS18 74 aa7.23□□□□□ -1.25
TPM3-202ENST00000302206 BPY2O14599 106 aa7.21□□□□□ -1.26
TPM3-202ENST00000302206 FAT1Q14517 4588 aa7.2□□□□□ -1.26
TPM3-202ENST00000302206 A0A087WVE0 104 aa7.19□□□□□ -1.26
TPM3-202ENST00000302206 ATOX1O00244 68 aa7.19□□□□□ -1.26
TPM3-202ENST00000302206 C9orf153Q5TBE3 101 aa7.19□□□□□ -1.26
TPM3-202ENST00000302206 IGLV9-49A0A0B4J1Y8 123 aa7.18□□□□□ -1.26
TPM3-202ENST00000302206 A0A0G2JQZ4 141 aa7.18□□□□□ -1.26
TPM3-202ENST00000302206 A0A087WSZ3 146 aa7.17□□□□□ -1.26
TPM3-202ENST00000302206 MYCBP2O75592 4640 aa7.16□□□□□ -1.26
TPM3-202ENST00000302206 IGKV4-1P06312 121 aa7.15□□□□□ -1.26
TPM3-202ENST00000302206 MOBPQ13875 183 aa7.15□□□□□ -1.26
TPM3-202ENST00000302206 FAM229BQ4G0N7 80 aa7.15□□□□□ -1.26
TPM3-202ENST00000302206 SSBP3-AS1Q7Z2R9 100 aa7.14□□□□□ -1.27
TPM3-202ENST00000302206 UBR4Q5T4S7 5183 aa7.13□□□□□ -1.27
TPM3-202ENST00000302206 CD164Q04900 197 aa7.13□□□□□ -1.27
TPM3-202ENST00000302206 DSCR10P59022 87 aa7.12□□□□□ -1.27
TPM3-202ENST00000302206 SMIM20Q8N5G0 67 aa7.12□□□□□ -1.27
TPM3-202ENST00000302206 LINC00472Q9H8W2 130 aa7.12□□□□□ -1.27
TPM3-202ENST00000302206 ANAPC11Q9NYG5 84 aa7.12□□□□□ -1.27
TPM3-202ENST00000302206 SS18L2Q9UHA2 77 aa7.12□□□□□ -1.27
TPM3-202ENST00000302206 J3KT08 172 aa7.11□□□□□ -1.27
TPM3-202ENST00000302206 SRRM2Q9UQ35 2752 aaKnown RBP7.1□□□□□ -1.27
TPM3-202ENST00000302206 SERP2Q8N6R1 65 aa7.1□□□□□ -1.27
TPM3-202ENST00000302206 COX7CP15954 63 aa7.09□□□□□ -1.27
TPM3-202ENST00000302206 SPINK6Q6UWN8 80 aa7.09□□□□□ -1.27
TPM3-202ENST00000302206 Q8N9L7 120 aa7.09□□□□□ -1.27
TPM3-202ENST00000302206 UQCRQO14949 82 aa7.08□□□□□ -1.28
TPM3-202ENST00000302206 PLA2G1BP04054 148 aaKnown RBP7.07□□□□□ -1.28
TPM3-202ENST00000302206 KRTAP1-4P0C5Y4 121 aa7.07□□□□□ -1.28
TPM3-202ENST00000302206 TRAV7A0A075B6U4 112 aa7.06□□□□□ -1.28
TPM3-202ENST00000302206 K7EQZ3 153 aa7.06□□□□□ -1.28
TPM3-202ENST00000302206 FLG2Q5D862 2391 aaPredicted RBP7.05□□□□□ -1.28
TPM3-202ENST00000302206 A8MWP4 228 aa7.05□□□□□ -1.28
TPM3-202ENST00000302206 CCDC179H3BU77 68 aa7.05□□□□□ -1.28
TPM3-202ENST00000302206 Q5VSD8 79 aa7.05□□□□□ -1.28
TPM3-202ENST00000302206 Q96NJ1 140 aa7.05□□□□□ -1.28
TPM3-202ENST00000302206 A0A087X002 238 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms