RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 DEFB131BA0A096LNP1 70 aa8.23□□□□□ -1.09
TVP23A-201ENST00000299866 C16orf90A8MZG2 172 aa8.23□□□□□ -1.09
TVP23A-201ENST00000299866 LIMD2Q9BT23 127 aa8.21□□□□□ -1.09
TVP23A-201ENST00000299866 KRTAP29-1A8MX34 341 aaPredicted RBP8.21□□□□□ -1.1
TVP23A-201ENST00000299866 TENM3Q9P273 2699 aa8.2□□□□□ -1.1
TVP23A-201ENST00000299866 A6NED7 52 aa8.2□□□□□ -1.1
TVP23A-201ENST00000299866 CD164Q04900 197 aa8.19□□□□□ -1.1
TVP23A-201ENST00000299866 SPANXA2-OT1Q8N9U9 137 aa8.19□□□□□ -1.1
TVP23A-201ENST00000299866 IGKV2-24A0A0C4DH68 120 aa8.19□□□□□ -1.1
TVP23A-201ENST00000299866 CNBPP62633 177 aaKnown RBP8.19□□□□□ -1.1
TVP23A-201ENST00000299866 OXLD1Q5BKU9 147 aa8.18□□□□□ -1.1
TVP23A-201ENST00000299866 A0A096LNI7 61 aa8.18□□□□□ -1.1
TVP23A-201ENST00000299866 LINC00588Q9Y4M8 146 aa8.18□□□□□ -1.1
TVP23A-201ENST00000299866 DNAH10OSP0CZ25 163 aa8.17□□□□□ -1.1
TVP23A-201ENST00000299866 LCA10Q71F78 164 aa8.17□□□□□ -1.1
TVP23A-201ENST00000299866 COA5Q86WW8 74 aa8.16□□□□□ -1.1
TVP23A-201ENST00000299866 PCOTHQ58A44 107 aa8.16□□□□□ -1.1
TVP23A-201ENST00000299866 TENM4Q6N022 2769 aa8.16□□□□□ -1.1
TVP23A-201ENST00000299866 H0Y9J4 135 aa8.16□□□□□ -1.1
TVP23A-201ENST00000299866 C11orf45Q8TAV5 145 aa8.16□□□□□ -1.1
TVP23A-201ENST00000299866 INAFM1C9JVW0 142 aa8.15□□□□□ -1.1
TVP23A-201ENST00000299866 H3BPC8 53 aa8.14□□□□□ -1.11
TVP23A-201ENST00000299866 KTN1-AS1Q86SY8 53 aa8.14□□□□□ -1.11
TVP23A-201ENST00000299866 C9orf163Q8N9P6 203 aa8.14□□□□□ -1.11
TVP23A-201ENST00000299866 SRRM2Q9UQ35 2752 aaKnown RBP8.14□□□□□ -1.11
TVP23A-201ENST00000299866 HELZ2Q9BYK8 2649 aaKnown RBP8.13□□□□□ -1.11
TVP23A-201ENST00000299866 A8MWP4 228 aa8.13□□□□□ -1.11
TVP23A-201ENST00000299866 IGLV8-61A0A075B6I0 122 aa8.11□□□□□ -1.11
TVP23A-201ENST00000299866 KRTAP10-11P60412 298 aa8.11□□□□□ -1.11
TVP23A-201ENST00000299866 Q75L30 129 aa8.11□□□□□ -1.11
TVP23A-201ENST00000299866 RBM12B-AS1Q9P1G2 102 aa8.11□□□□□ -1.11
TVP23A-201ENST00000299866 SPAG11AQ6PDA7 123 aa8.1□□□□□ -1.11
TVP23A-201ENST00000299866 FLNBO75369 2602 aaKnown RBP8.1□□□□□ -1.11
TVP23A-201ENST00000299866 ATP11AUNQ6ZP68 121 aa8.1□□□□□ -1.11
TVP23A-201ENST00000299866 OTOGQ6ZRI0 2925 aa8.1□□□□□ -1.11
TVP23A-201ENST00000299866 LINC00472Q9H8W2 130 aa8.09□□□□□ -1.11
TVP23A-201ENST00000299866 IGLV7-46A0A075B6I9 117 aa8.07□□□□□ -1.12
TVP23A-201ENST00000299866 LOC101927531A0A1B0GV80 90 aa8.07□□□□□ -1.12
TVP23A-201ENST00000299866 MMP24-AS1A0A0U1RRL7 71 aa8.06□□□□□ -1.12
TVP23A-201ENST00000299866 PHF5AQ7RTV0 110 aaKnown RBP8.05□□□□□ -1.12
TVP23A-201ENST00000299866 KRTAP11-1Q8IUC1 163 aa8.05□□□□□ -1.12
TVP23A-201ENST00000299866 NSD1Q96L73 2696 aaPredicted RBP8.05□□□□□ -1.12
TVP23A-201ENST00000299866 A6NN06 94 aa8.04□□□□□ -1.12
TVP23A-201ENST00000299866 HECTD1Q9ULT8 2610 aa8.04□□□□□ -1.12
TVP23A-201ENST00000299866 CHTF8P0CG12 524 aa8.04□□□□□ -1.12
TVP23A-201ENST00000299866 MAST4O15021 2626 aa8.04□□□□□ -1.12
TVP23A-201ENST00000299866 CDC42SE1Q9NRR8 79 aa8.04□□□□□ -1.12
TVP23A-201ENST00000299866 NDUFS5O43920 106 aa8.03□□□□□ -1.12
TVP23A-201ENST00000299866 MOBPQ13875 183 aa8.01□□□□□ -1.13
TVP23A-201ENST00000299866 SPINK7P58062 85 aa8□□□□□ -1.13
TVP23A-201ENST00000299866 LINC01558Q9Y6Z2 57 aa7.99□□□□□ -1.13
TVP23A-201ENST00000299866 NOTCH1P46531 2555 aa7.99□□□□□ -1.13
TVP23A-201ENST00000299866 FBN1P35555 2871 aaKnown RBP7.98□□□□□ -1.13
TVP23A-201ENST00000299866 IGLV9-49A0A0B4J1Y8 123 aa7.97□□□□□ -1.13
TVP23A-201ENST00000299866 SPRR1BP22528 89 aa7.96□□□□□ -1.13
TVP23A-201ENST00000299866 HRES1P13985 223 aa7.96□□□□□ -1.14
TVP23A-201ENST00000299866 ANK2Q01484 3957 aa7.96□□□□□ -1.14
TVP23A-201ENST00000299866 IGHV6-1A0A0B4J1U7 121 aa7.96□□□□□ -1.14
TVP23A-201ENST00000299866 C7orf65Q6ZTY9 151 aa7.95□□□□□ -1.14
TVP23A-201ENST00000299866 COL6A5A8TX70 2615 aa7.94□□□□□ -1.14
TVP23A-201ENST00000299866 TP53AIP1Q9HCN2 124 aa7.94□□□□□ -1.14
TVP23A-201ENST00000299866 C8orf17Q9NRJ1 99 aa7.94□□□□□ -1.14
TVP23A-201ENST00000299866 KRTAP1-5Q9BYS1 174 aa7.93□□□□□ -1.14
TVP23A-201ENST00000299866 PLAC8Q9NZF1 115 aa7.93□□□□□ -1.14
TVP23A-201ENST00000299866 CSMD3Q7Z407 3707 aa7.93□□□□□ -1.14
TVP23A-201ENST00000299866 TENM2Q9NT68 2774 aa7.92□□□□□ -1.14
TVP23A-201ENST00000299866 STAB1Q9NY15 2570 aa7.91□□□□□ -1.14
TVP23A-201ENST00000299866 PRR26Q8N8Z3 221 aa7.91□□□□□ -1.14
TVP23A-201ENST00000299866 Q96NJ1 140 aa7.91□□□□□ -1.14
TVP23A-201ENST00000299866 DNAH1Q9P2D7 4330 aa7.9□□□□□ -1.14
TVP23A-201ENST00000299866 Q6ZR54 194 aa7.9□□□□□ -1.14
TVP23A-201ENST00000299866 DNAH10Q8IVF4 4471 aa7.89□□□□□ -1.15
TVP23A-201ENST00000299866 COL7A1Q02388 2944 aa7.89□□□□□ -1.15
TVP23A-201ENST00000299866 K7EIL1 84 aa7.88□□□□□ -1.15
TVP23A-201ENST00000299866 CDK2AP2O75956 126 aa7.88□□□□□ -1.15
TVP23A-201ENST00000299866 NBEAL1Q6ZS30 2694 aa7.88□□□□□ -1.15
TVP23A-201ENST00000299866 J3QKU1 62 aa7.88□□□□□ -1.15
TVP23A-201ENST00000299866 ASB16-AS1Q495Z4 193 aa7.87□□□□□ -1.15
TVP23A-201ENST00000299866 A0A087X002 238 aa7.87□□□□□ -1.15
TVP23A-201ENST00000299866 NOTCH2NLQ7Z3S9 236 aa7.87□□□□□ -1.15
TVP23A-201ENST00000299866 A0A1B0GVX0 72 aa7.86□□□□□ -1.15
TVP23A-201ENST00000299866 MRPL34Q9BQ48 92 aaKnown RBP7.86□□□□□ -1.15
TVP23A-201ENST00000299866 PRAC1Q96KF2 57 aa7.85□□□□□ -1.15
TVP23A-201ENST00000299866 PANO1I0J062 215 aa7.84□□□□□ -1.15
TVP23A-201ENST00000299866 KMT2BQ9UMN6 2715 aaPredicted RBP7.84□□□□□ -1.15
TVP23A-201ENST00000299866 UBE2DNLQ8IWF7 75 aa7.83□□□□□ -1.16
TVP23A-201ENST00000299866 ANAPC11Q9NYG5 84 aa7.82□□□□□ -1.16
TVP23A-201ENST00000299866 LINC00313P59037 77 aa7.82□□□□□ -1.16
TVP23A-201ENST00000299866 SPINK6Q6UWN8 80 aa7.81□□□□□ -1.16
TVP23A-201ENST00000299866 KRTAP13-1Q8IUC0 172 aa7.79□□□□□ -1.16
TVP23A-201ENST00000299866 MDFIQ99750 246 aa7.79□□□□□ -1.16
TVP23A-201ENST00000299866 C14orf177Q52M58 125 aa7.79□□□□□ -1.16
TVP23A-201ENST00000299866 Q5W150 140 aa7.79□□□□□ -1.16
TVP23A-201ENST00000299866 ADM2Q7Z4H4 148 aa7.79□□□□□ -1.16
TVP23A-201ENST00000299866 LYSTQ99698 3801 aa7.76□□□□□ -1.17
TVP23A-201ENST00000299866 C8orf87E5RJ46 101 aa7.75□□□□□ -1.17
TVP23A-201ENST00000299866 ACYP2P14621 99 aa7.74□□□□□ -1.17
TVP23A-201ENST00000299866 STAB2Q8WWQ8 2551 aa7.74□□□□□ -1.17
TVP23A-201ENST00000299866 KRTAP24-1Q3LI83 254 aa7.73□□□□□ -1.17
TVP23A-201ENST00000299866 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms