RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 PDE6GP18545 87 aa6.53□□□□□ -1.36
RFC4-201ENST00000296273 PCP4P48539 62 aa6.53□□□□□ -1.36
RFC4-201ENST00000296273 ELOF1P60002 83 aaKnown RBP6.53□□□□□ -1.36
RFC4-201ENST00000296273 C22orf24Q9Y442 160 aa6.53□□□□□ -1.36
RFC4-201ENST00000296273 C9orf129Q5T035 196 aaKnown RBP6.51□□□□□ -1.37
RFC4-201ENST00000296273 Q6Q795 121 aa6.51□□□□□ -1.37
RFC4-201ENST00000296273 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
RFC4-201ENST00000296273 PRYO14603 147 aa6.5□□□□□ -1.37
RFC4-201ENST00000296273 LINC00643Q86TS7 51 aa6.5□□□□□ -1.37
RFC4-201ENST00000296273 KRTAP4-6Q9BYQ5 205 aa6.5□□□□□ -1.37
RFC4-201ENST00000296273 IMUPQ9GZP8 106 aa6.5□□□□□ -1.37
RFC4-201ENST00000296273 DHRS4-AS1Q9P1J3 65 aa6.49□□□□□ -1.37
RFC4-201ENST00000296273 LOC110117498A0A087WWA1 95 aa6.47□□□□□ -1.37
RFC4-201ENST00000296273 CCKP06307 115 aa6.47□□□□□ -1.37
RFC4-201ENST00000296273 RBM3P98179 157 aaKnown RBP6.47□□□□□ -1.37
RFC4-201ENST00000296273 IGLV1-50A0A075B6I6 118 aa6.46□□□□□ -1.37
RFC4-201ENST00000296273 SPRR1AP35321 89 aa6.46□□□□□ -1.37
RFC4-201ENST00000296273 GAGE2BQ13066 116 aa6.46□□□□□ -1.37
RFC4-201ENST00000296273 GAGE2AQ6NT46 116 aa6.46□□□□□ -1.37
RFC4-201ENST00000296273 PSORS1C2Q9UIG4 136 aa6.46□□□□□ -1.37
RFC4-201ENST00000296273 MT-ATP8P03928 68 aa6.45□□□□□ -1.38
RFC4-201ENST00000296273 Q6ZQY7 126 aa6.45□□□□□ -1.38
RFC4-201ENST00000296273 MRPL55Q7Z7F7 128 aaKnown RBP6.45□□□□□ -1.38
RFC4-201ENST00000296273 TRBV7-7A0A0K0K1E9 115 aa6.44□□□□□ -1.38
RFC4-201ENST00000296273 DSCR8Q96T75 97 aa6.44□□□□□ -1.38
RFC4-201ENST00000296273 C14orf132Q9NPU4 83 aa6.44□□□□□ -1.38
RFC4-201ENST00000296273 LAMTOR3Q9UHA4 124 aa6.44□□□□□ -1.38
RFC4-201ENST00000296273 LPAP08519 4548 aa6.44□□□□□ -1.38
RFC4-201ENST00000296273 ETDCA0A1B0GVM5 59 aa6.44□□□□□ -1.38
RFC4-201ENST00000296273 A0A1B0GW54 56 aa6.43□□□□□ -1.38
RFC4-201ENST00000296273 A0A1W2PNN7 141 aa6.43□□□□□ -1.38
RFC4-201ENST00000296273 C1orf137Q5JT78 98 aa6.43□□□□□ -1.38
RFC4-201ENST00000296273 Q6ZRX8 168 aa6.43□□□□□ -1.38
RFC4-201ENST00000296273 A0A0U1RQV1 116 aa6.42□□□□□ -1.38
RFC4-201ENST00000296273 B5MCH6 92 aa6.42□□□□□ -1.38
RFC4-201ENST00000296273 KRTAP4-16G5E9R7 235 aaPredicted RBP6.42□□□□□ -1.38
RFC4-201ENST00000296273 ATP5EP2Q5VTU8 51 aa6.42□□□□□ -1.38
RFC4-201ENST00000296273 NDUFV3P56181 108 aaKnown RBP6.41□□□□□ -1.38
RFC4-201ENST00000296273 Q6JHZ5 121 aa6.4□□□□□ -1.39
RFC4-201ENST00000296273 Q6ZQT0 140 aa6.4□□□□□ -1.39
RFC4-201ENST00000296273 PRR26Q8N8Z3 221 aa6.4□□□□□ -1.39
RFC4-201ENST00000296273 A0A1B0GV72 72 aa6.39□□□□□ -1.39
RFC4-201ENST00000296273 IGLV7-43P04211 117 aa6.39□□□□□ -1.39
RFC4-201ENST00000296273 FAM19A5Q7Z5A7 132 aaPredicted RBP6.39□□□□□ -1.39
RFC4-201ENST00000296273 UBL5Q9BZL1 73 aa6.39□□□□□ -1.39
RFC4-201ENST00000296273 TRBV7-4A0A0J9YYF1 115 aa6.38□□□□□ -1.39
RFC4-201ENST00000296273 H0Y9J4 135 aa6.38□□□□□ -1.39
RFC4-201ENST00000296273 PHF5AQ7RTV0 110 aaKnown RBP6.38□□□□□ -1.39
RFC4-201ENST00000296273 IGLV5-48A0A075B6I7 105 aa6.37□□□□□ -1.39
RFC4-201ENST00000296273 FAM168BA1KXE4 195 aa6.37□□□□□ -1.39
RFC4-201ENST00000296273 RPL37AP8A6NKH3 93 aa6.37□□□□□ -1.39
RFC4-201ENST00000296273 KRTAP7-1Q8IUC3 87 aa6.37□□□□□ -1.39
RFC4-201ENST00000296273 LINC00846Q9NV44 126 aa6.37□□□□□ -1.39
RFC4-201ENST00000296273 SMCR5Q8TEV8 140 aa6.35□□□□□ -1.39
RFC4-201ENST00000296273 KRTAP9-2Q9BYQ4 174 aa6.35□□□□□ -1.39
RFC4-201ENST00000296273 PRR4Q16378 134 aa6.34□□□□□ -1.39
RFC4-201ENST00000296273 UBE2BP63146 152 aa6.33□□□□□ -1.4
RFC4-201ENST00000296273 XP32Q5T750 250 aa6.33□□□□□ -1.4
RFC4-201ENST00000296273 Q8N377 158 aa6.33□□□□□ -1.4
RFC4-201ENST00000296273 KRTAP1-4P0C5Y4 121 aa6.32□□□□□ -1.4
RFC4-201ENST00000296273 Q9BRP9 147 aa6.32□□□□□ -1.4
RFC4-201ENST00000296273 ANAPC13Q9BS18 74 aa6.32□□□□□ -1.4
RFC4-201ENST00000296273 LINC01547P58512 204 aaPredicted RBP6.31□□□□□ -1.4
RFC4-201ENST00000296273 CXCL6P80162 114 aa6.31□□□□□ -1.4
RFC4-201ENST00000296273 FAM19A1Q7Z5A9 133 aa6.31□□□□□ -1.4
RFC4-201ENST00000296273 MUC2Q02817 5179 aa6.3□□□□□ -1.4
RFC4-201ENST00000296273 F8WEM9 126 aa6.3□□□□□ -1.4
RFC4-201ENST00000296273 KRTAP11-1Q8IUC1 163 aa6.3□□□□□ -1.4
RFC4-201ENST00000296273 BCE1O60756 84 aa6.29□□□□□ -1.4
RFC4-201ENST00000296273 DEFB105AQ8NG35 78 aa6.29□□□□□ -1.4
RFC4-201ENST00000296273 ATOX1O00244 68 aa6.28□□□□□ -1.4
RFC4-201ENST00000296273 SPRR1BP22528 89 aa6.28□□□□□ -1.4
RFC4-201ENST00000296273 IGLV8-61A0A075B6I0 122 aa6.27□□□□□ -1.41
RFC4-201ENST00000296273 HIST1H4AP62805 103 aaKnown RBP6.27□□□□□ -1.41
RFC4-201ENST00000296273 Q6ZVQ6 151 aa6.27□□□□□ -1.41
RFC4-201ENST00000296273 FAM236AA0A1B0GUQ0 79 aa6.26□□□□□ -1.41
RFC4-201ENST00000296273 FAM236BA0A1B0GV22 79 aa6.26□□□□□ -1.41
RFC4-201ENST00000296273 ZNF861PO60384 105 aa6.26□□□□□ -1.41
RFC4-201ENST00000296273 IGKV3D-7A0A0C4DH55 119 aa6.25□□□□□ -1.41
RFC4-201ENST00000296273 UBE2AP49459 152 aa6.25□□□□□ -1.41
RFC4-201ENST00000296273 NREPQ16612 68 aa6.25□□□□□ -1.41
RFC4-201ENST00000296273 ERC2-IT1O76042 136 aa6.24□□□□□ -1.41
RFC4-201ENST00000296273 SMIM20Q8N5G0 67 aa6.24□□□□□ -1.41
RFC4-201ENST00000296273 ST20-AS1Q8NBB2 130 aa6.24□□□□□ -1.41
RFC4-201ENST00000296273 Q8NBF4 154 aa6.24□□□□□ -1.41
RFC4-201ENST00000296273 SPRR4Q96PI1 79 aa6.24□□□□□ -1.41
RFC4-201ENST00000296273 SMIM29Q86T20 159 aa6.23□□□□□ -1.41
RFC4-201ENST00000296273 HIGD2AQ9BW72 106 aa6.23□□□□□ -1.41
RFC4-201ENST00000296273 ZNF706Q9Y5V0 76 aaPredicted RBP6.23□□□□□ -1.41
RFC4-201ENST00000296273 KRTAP9-6A0A140TA67 174 aa6.22□□□□□ -1.41
RFC4-201ENST00000296273 CRYGAP11844 174 aa6.22□□□□□ -1.41
RFC4-201ENST00000296273 PRLHP81277 87 aa6.22□□□□□ -1.41
RFC4-201ENST00000296273 KRTAP13-1Q8IUC0 172 aa6.21□□□□□ -1.41
RFC4-201ENST00000296273 UQCRQO14949 82 aa6.2□□□□□ -1.42
RFC4-201ENST00000296273 TYMSOSQ8TAI1 123 aa6.2□□□□□ -1.42
RFC4-201ENST00000296273 A0A087X002 238 aa6.18□□□□□ -1.42
RFC4-201ENST00000296273 A0A1W2PNM2 257 aa6.18□□□□□ -1.42
RFC4-201ENST00000296273 BPY2O14599 106 aa6.18□□□□□ -1.42
RFC4-201ENST00000296273 COX7CP15954 63 aa6.18□□□□□ -1.42
RFC4-201ENST00000296273 C3orf22Q8N5N4 141 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms