RNA–Protein interactions for RNA: ENST00000296137.6

FYCO1-201, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FYCO1, Length 8,504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-201ENST00000296137 NOTCH1P46531 2555 aa7.02□□□□□ -1.29
FYCO1-201ENST00000296137 DSPP15924 2871 aaKnown RBP7.01□□□□□ -1.29
FYCO1-201ENST00000296137 KLK9Q2XQG4 91 aa6.99□□□□□ -1.29
FYCO1-201ENST00000296137 COL6A5A8TX70 2615 aa6.98□□□□□ -1.29
FYCO1-201ENST00000296137 GCN1Q92616 2671 aaKnown RBP6.97□□□□□ -1.29
FYCO1-201ENST00000296137 MGAQ8IWI9 3026 aa6.97□□□□□ -1.29
FYCO1-201ENST00000296137 BAHCC1Q9P281 2608 aa6.97□□□□□ -1.29
FYCO1-201ENST00000296137 TEP1Q99973 2627 aaKnown RBP6.97□□□□□ -1.29
FYCO1-201ENST00000296137 KRTAP25-1Q3LHN0 102 aa6.96□□□□□ -1.3
FYCO1-201ENST00000296137 NDUFAF8A1L188 74 aa6.95□□□□□ -1.3
FYCO1-201ENST00000296137 A0A096LNT2 108 aa6.95□□□□□ -1.3
FYCO1-201ENST00000296137 RPL37P61927 97 aaKnown RBP6.94□□□□□ -1.3
FYCO1-201ENST00000296137 MAP1AP78559 2803 aaPredicted RBP6.94□□□□□ -1.3
FYCO1-201ENST00000296137 KRTAP24-1Q3LI83 254 aa6.92□□□□□ -1.3
FYCO1-201ENST00000296137 TNP2Q05952 138 aa6.92□□□□□ -1.3
FYCO1-201ENST00000296137 MMP24-AS1A0A0U1RRL7 71 aa6.92□□□□□ -1.3
FYCO1-201ENST00000296137 RANBP2P49792 3224 aaKnown RBP6.92□□□□□ -1.3
FYCO1-201ENST00000296137 FREM2Q5SZK8 3169 aa6.91□□□□□ -1.3
FYCO1-201ENST00000296137 ANAPC11Q9NYG5 84 aa6.91□□□□□ -1.3
FYCO1-201ENST00000296137 KMT2BQ9UMN6 2715 aaPredicted RBP6.91□□□□□ -1.3
FYCO1-201ENST00000296137 APCP25054 2843 aa6.9□□□□□ -1.31
FYCO1-201ENST00000296137 GIG44P09565 113 aaPredicted RBP6.89□□□□□ -1.31
FYCO1-201ENST00000296137 SPATA8Q6RVD6 105 aa6.89□□□□□ -1.31
FYCO1-201ENST00000296137 H1FX-AS1Q4G0G2 97 aa6.87□□□□□ -1.31
FYCO1-201ENST00000296137 STAB2Q8WWQ8 2551 aa6.86□□□□□ -1.31
FYCO1-201ENST00000296137 S4R3F8 94 aa6.86□□□□□ -1.31
FYCO1-201ENST00000296137 ITPR1Q14643 2758 aa6.85□□□□□ -1.31
FYCO1-201ENST00000296137 PSORS1C2Q9UIG4 136 aa6.85□□□□□ -1.31
FYCO1-201ENST00000296137 Q5W150 140 aa6.85□□□□□ -1.31
FYCO1-201ENST00000296137 ZNF292O60281 2723 aa6.82□□□□□ -1.32
FYCO1-201ENST00000296137 VPS13AQ96RL7 3174 aa6.81□□□□□ -1.32
FYCO1-201ENST00000296137 LINC00472Q9H8W2 130 aa6.8□□□□□ -1.32
FYCO1-201ENST00000296137 ITPR2Q14571 2701 aa6.8□□□□□ -1.32
FYCO1-201ENST00000296137 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.8□□□□□ -1.32
FYCO1-201ENST00000296137 Q6ZR54 194 aa6.8□□□□□ -1.32
FYCO1-201ENST00000296137 A0A087X002 238 aa6.79□□□□□ -1.32
FYCO1-201ENST00000296137 LINC00612Q8N6U2 182 aa6.79□□□□□ -1.32
FYCO1-201ENST00000296137 ZCCHC13Q8WW36 166 aaKnown RBP6.79□□□□□ -1.32
FYCO1-201ENST00000296137 XIRP2A4UGR9 3374 aa6.79□□□□□ -1.32
FYCO1-201ENST00000296137 ADM2Q7Z4H4 148 aa6.78□□□□□ -1.32
FYCO1-201ENST00000296137 LRBAP50851 2863 aa6.78□□□□□ -1.32
FYCO1-201ENST00000296137 M0R2T5 61 aa6.78□□□□□ -1.32
FYCO1-201ENST00000296137 UTP20O75691 2785 aaKnown RBP6.77□□□□□ -1.32
FYCO1-201ENST00000296137 SMR3BP02814 79 aaPredicted RBP6.77□□□□□ -1.33
FYCO1-201ENST00000296137 TRANK1O15050 2925 aa6.76□□□□□ -1.33
FYCO1-201ENST00000296137 R4GN34 69 aa6.76□□□□□ -1.33
FYCO1-201ENST00000296137 A0A087WTM6 91 aa6.75□□□□□ -1.33
FYCO1-201ENST00000296137 K7EIL1 84 aa6.75□□□□□ -1.33
FYCO1-201ENST00000296137 PLAC4Q8WY50 150 aa6.75□□□□□ -1.33
FYCO1-201ENST00000296137 TRIOO75962 3097 aa6.74□□□□□ -1.33
FYCO1-201ENST00000296137 NSD1Q96L73 2696 aaPredicted RBP6.73□□□□□ -1.33
FYCO1-201ENST00000296137 Q6ZSA8 131 aa6.72□□□□□ -1.33
FYCO1-201ENST00000296137 KRTAP10-11P60412 298 aa6.72□□□□□ -1.33
FYCO1-201ENST00000296137 FRYQ5TBA9 3013 aa6.7□□□□□ -1.34
FYCO1-201ENST00000296137 DNAH14Q0VDD8 3507 aa6.69□□□□□ -1.34
FYCO1-201ENST00000296137 CELSR3Q9NYQ7 3312 aa6.68□□□□□ -1.34
FYCO1-201ENST00000296137 KALRNO60229 2985 aa6.68□□□□□ -1.34
FYCO1-201ENST00000296137 SPRR1AP35321 89 aa6.67□□□□□ -1.34
FYCO1-201ENST00000296137 CHD7Q9P2D1 2997 aa6.67□□□□□ -1.34
FYCO1-201ENST00000296137 A8MU10 97 aa6.66□□□□□ -1.34
FYCO1-201ENST00000296137 Q8NDZ9 215 aa6.66□□□□□ -1.34
FYCO1-201ENST00000296137 UBR5O95071 2799 aaPredicted RBP6.65□□□□□ -1.34
FYCO1-201ENST00000296137 C20orf166-AS1Q96NR2 134 aa6.65□□□□□ -1.34
FYCO1-201ENST00000296137 A8MUU9 505 aa6.65□□□□□ -1.35
FYCO1-201ENST00000296137 KRTAP26-1Q6PEX3 210 aa6.65□□□□□ -1.35
FYCO1-201ENST00000296137 NBEAL2Q6ZNJ1 2754 aa6.64□□□□□ -1.35
FYCO1-201ENST00000296137 PANO1I0J062 215 aa6.64□□□□□ -1.35
FYCO1-201ENST00000296137 CASC10Q5T4H9 136 aa6.64□□□□□ -1.35
FYCO1-201ENST00000296137 LCE6AA0A183 80 aa6.62□□□□□ -1.35
FYCO1-201ENST00000296137 KRTAP29-1A8MX34 341 aaPredicted RBP6.6□□□□□ -1.35
FYCO1-201ENST00000296137 M0QZ58 72 aa6.6□□□□□ -1.35
FYCO1-201ENST00000296137 MKI67P46013 3256 aaKnown RBP6.59□□□□□ -1.35
FYCO1-201ENST00000296137 CHD9Q3L8U1 2897 aa6.59□□□□□ -1.35
FYCO1-201ENST00000296137 FRYLO94915 3013 aa6.58□□□□□ -1.36
FYCO1-201ENST00000296137 SPRR1BP22528 89 aa6.58□□□□□ -1.36
FYCO1-201ENST00000296137 UNC80Q8N2C7 3258 aa6.58□□□□□ -1.36
FYCO1-201ENST00000296137 PRUNE2Q8WUY3 3088 aa6.56□□□□□ -1.36
FYCO1-201ENST00000296137 IGSF10Q6WRI0 2623 aa6.55□□□□□ -1.36
FYCO1-201ENST00000296137 NBEAQ8NFP9 2946 aa6.52□□□□□ -1.37
FYCO1-201ENST00000296137 TACC2O95359 2948 aa6.52□□□□□ -1.37
FYCO1-201ENST00000296137 KRTAP11-1Q8IUC1 163 aa6.51□□□□□ -1.37
FYCO1-201ENST00000296137 ASH1LQ9NR48 2969 aaKnown RBP6.51□□□□□ -1.37
FYCO1-201ENST00000296137 KRTAP10-3P60369 221 aa6.48□□□□□ -1.37
FYCO1-201ENST00000296137 COL12A1Q99715 3063 aa6.48□□□□□ -1.37
FYCO1-201ENST00000296137 C10orf95Q9H7T3 257 aa6.46□□□□□ -1.38
FYCO1-201ENST00000296137 ZFHX3Q15911 3703 aa6.45□□□□□ -1.38
FYCO1-201ENST00000296137 FLNCQ14315 2725 aa6.45□□□□□ -1.38
FYCO1-201ENST00000296137 KRTAP4-16G5E9R7 235 aaPredicted RBP6.44□□□□□ -1.38
FYCO1-201ENST00000296137 WDFY4Q6ZS81 3184 aa6.44□□□□□ -1.38
FYCO1-201ENST00000296137 PLAC8Q9NZF1 115 aa6.43□□□□□ -1.38
FYCO1-201ENST00000296137 LAMA1P25391 3075 aa6.42□□□□□ -1.38
FYCO1-201ENST00000296137 DMXL1Q9Y485 3027 aa6.41□□□□□ -1.38
FYCO1-201ENST00000296137 CDH23Q9H251 3354 aa6.39□□□□□ -1.39
FYCO1-201ENST00000296137 SRRM2Q9UQ35 2752 aaKnown RBP6.38□□□□□ -1.39
FYCO1-201ENST00000296137 KRTAP1-3Q8IUG1 177 aa6.37□□□□□ -1.39
FYCO1-201ENST00000296137 BRCA2P51587 3418 aa6.36□□□□□ -1.39
FYCO1-201ENST00000296137 NOTCH2NLQ7Z3S9 236 aa6.36□□□□□ -1.39
FYCO1-201ENST00000296137 LAMA3Q16787 3333 aa6.36□□□□□ -1.39
FYCO1-201ENST00000296137 CRYBG3Q68DQ2 2970 aa6.34□□□□□ -1.39
FYCO1-201ENST00000296137 BOD1L1Q8NFC6 3051 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms