RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 SOSTDC1Q6X4U4 206 aa5.67□□□□□ -1.5
USP41-201ENST00000292729 SPCS1Q9Y6A9 102 aa5.67□□□□□ -1.5
USP41-201ENST00000292729 COX6CP09669 75 aa5.66□□□□□ -1.5
USP41-201ENST00000292729 SMCR5Q8TEV8 140 aa5.66□□□□□ -1.5
USP41-201ENST00000292729 A0A0U1RRA0 63 aa5.65□□□□□ -1.5
USP41-201ENST00000292729 NPC2P61916 151 aa5.65□□□□□ -1.5
USP41-201ENST00000292729 MOBPQ13875 183 aa5.65□□□□□ -1.5
USP41-201ENST00000292729 Q1RN00 199 aa5.65□□□□□ -1.5
USP41-201ENST00000292729 FLGP20930 4061 aaPredicted RBP5.64□□□□□ -1.51
USP41-201ENST00000292729 PRYO14603 147 aa5.64□□□□□ -1.51
USP41-201ENST00000292729 EIF4EBP3O60516 100 aaPredicted RBP5.64□□□□□ -1.51
USP41-201ENST00000292729 COX6B2Q6YFQ2 88 aa5.64□□□□□ -1.51
USP41-201ENST00000292729 IGLV9-49A0A0B4J1Y8 123 aa5.63□□□□□ -1.51
USP41-201ENST00000292729 TRBV10-2A0A0K0K1G8 114 aa5.63□□□□□ -1.51
USP41-201ENST00000292729 PSMB2P49721 201 aa5.63□□□□□ -1.51
USP41-201ENST00000292729 GAGE2AQ6NT46 116 aa5.63□□□□□ -1.51
USP41-201ENST00000292729 Q8NDZ9 215 aa5.63□□□□□ -1.51
USP41-201ENST00000292729 CBY1Q9Y3M2 126 aa5.63□□□□□ -1.51
USP41-201ENST00000292729 SPRR1AP35321 89 aa5.62□□□□□ -1.51
USP41-201ENST00000292729 NAA38Q9BRA0 125 aaKnown RBP5.62□□□□□ -1.51
USP41-201ENST00000292729 ETDCA0A1B0GVM5 59 aa5.61□□□□□ -1.51
USP41-201ENST00000292729 SCGB1C2P0DMR2 95 aa5.61□□□□□ -1.51
USP41-201ENST00000292729 TRIAP1O43715 76 aa5.6□□□□□ -1.51
USP41-201ENST00000292729 ATXN8Q156A1 80 aa5.6□□□□□ -1.51
USP41-201ENST00000292729 KCNQ1DNQ9H478 68 aa5.6□□□□□ -1.51
USP41-201ENST00000292729 SSPOA2VEC9 5147 aa5.6□□□□□ -1.51
USP41-201ENST00000292729 F8W1H4 67 aa5.59□□□□□ -1.51
USP41-201ENST00000292729 KRTAP4-16G5E9R7 235 aaPredicted RBP5.59□□□□□ -1.51
USP41-201ENST00000292729 H7C2G1 150 aa5.59□□□□□ -1.51
USP41-201ENST00000292729 C9orf92A6NGG3 77 aa5.58□□□□□ -1.52
USP41-201ENST00000292729 H0YGX0 51 aa5.58□□□□□ -1.52
USP41-201ENST00000292729 TCL1BO95988 128 aa5.58□□□□□ -1.52
USP41-201ENST00000292729 A0A1B0GX51 115 aa5.57□□□□□ -1.52
USP41-201ENST00000292729 LST1O00453 97 aa5.57□□□□□ -1.52
USP41-201ENST00000292729 LIMD2Q9BT23 127 aa5.57□□□□□ -1.52
USP41-201ENST00000292729 H3BMG7 143 aa5.56□□□□□ -1.52
USP41-201ENST00000292729 TRACP01848 142 aa5.56□□□□□ -1.52
USP41-201ENST00000292729 S100A7L2Q5SY68 101 aa5.56□□□□□ -1.52
USP41-201ENST00000292729 C9orf153Q5TBE3 101 aa5.56□□□□□ -1.52
USP41-201ENST00000292729 OR13C6PQ8NH95 151 aa5.56□□□□□ -1.52
USP41-201ENST00000292729 USH2AO75445 5202 aa5.55□□□□□ -1.52
USP41-201ENST00000292729 B5MCH6 92 aa5.55□□□□□ -1.52
USP41-201ENST00000292729 H3BT86 120 aa5.55□□□□□ -1.52
USP41-201ENST00000292729 IGLV6-57P01721 117 aa5.55□□□□□ -1.52
USP41-201ENST00000292729 SMIM11BQ8TCY0 68 aa5.55□□□□□ -1.52
USP41-201ENST00000292729 SYNE2Q8WXH0 6885 aaKnown RBP5.54□□□□□ -1.52
USP41-201ENST00000292729 ERC2-IT1O76042 136 aa5.54□□□□□ -1.52
USP41-201ENST00000292729 SNCGO76070 127 aa5.54□□□□□ -1.52
USP41-201ENST00000292729 PRO0461Q9UI25 63 aa5.54□□□□□ -1.52
USP41-201ENST00000292729 FCGBPQ9Y6R7 5405 aaPredicted RBP5.53□□□□□ -1.52
USP41-201ENST00000292729 MACF1Q9UPN3 7388 aaKnown RBP5.53□□□□□ -1.52
USP41-201ENST00000292729 TRBV7-6A0A0J9YX20 115 aa5.53□□□□□ -1.52
USP41-201ENST00000292729 NCR3O14931 201 aa5.53□□□□□ -1.52
USP41-201ENST00000292729 TRAV23DV6A0A075B6W5 121 aa5.52□□□□□ -1.53
USP41-201ENST00000292729 TRBV10-3A0A0K0K1G6 114 aa5.52□□□□□ -1.53
USP41-201ENST00000292729 DNAL4O96015 105 aa5.52□□□□□ -1.53
USP41-201ENST00000292729 RPL37P61927 97 aaKnown RBP5.52□□□□□ -1.53
USP41-201ENST00000292729 C9JAW5 83 aa5.51□□□□□ -1.53
USP41-201ENST00000292729 H3BQ85 93 aa5.51□□□□□ -1.53
USP41-201ENST00000292729 J3QR89 54 aa5.51□□□□□ -1.53
USP41-201ENST00000292729 Q6ZRX8 168 aa5.51□□□□□ -1.53
USP41-201ENST00000292729 CLEC2BQ92478 149 aa5.51□□□□□ -1.53
USP41-201ENST00000292729 Q9BRP9 147 aa5.51□□□□□ -1.53
USP41-201ENST00000292729 K7ERU9 68 aa5.5□□□□□ -1.53
USP41-201ENST00000292729 GHRHP01286 108 aa5.5□□□□□ -1.53
USP41-201ENST00000292729 TEN1Q86WV5 123 aa5.5□□□□□ -1.53
USP41-201ENST00000292729 ANKRD29Q8N6D5 301 aa5.5□□□□□ -1.53
USP41-201ENST00000292729 ZNF73O43830 326 aaPredicted RBP5.49□□□□□ -1.53
USP41-201ENST00000292729 C6orf99Q4VX62 202 aa5.49□□□□□ -1.53
USP41-201ENST00000292729 KRTAP9-8Q9BYQ0 159 aa5.48□□□□□ -1.53
USP41-201ENST00000292729 SMCPP49901 116 aaPredicted RBP5.47□□□□□ -1.53
USP41-201ENST00000292729 ELOF1P60002 83 aaKnown RBP5.47□□□□□ -1.53
USP41-201ENST00000292729 ETDBQ3ZM63 59 aa5.47□□□□□ -1.53
USP41-201ENST00000292729 OCIAD2Q56VL3 154 aa5.47□□□□□ -1.53
USP41-201ENST00000292729 KRTAP19-1Q8IUB9 90 aa5.47□□□□□ -1.53
USP41-201ENST00000292729 PPDPFLQ8WWR9 84 aa5.47□□□□□ -1.53
USP41-201ENST00000292729 FAM218AQ96MZ4 157 aa5.47□□□□□ -1.53
USP41-201ENST00000292729 COX7BP24311 80 aa5.46□□□□□ -1.54
USP41-201ENST00000292729 HRCT1Q6UXD1 115 aa5.46□□□□□ -1.54
USP41-201ENST00000292729 LINC00575Q6W349 94 aa5.46□□□□□ -1.54
USP41-201ENST00000292729 MTURNQ8N3F0 131 aa5.46□□□□□ -1.54
USP41-201ENST00000292729 ORMDL1Q9P0S3 153 aa5.46□□□□□ -1.54
USP41-201ENST00000292729 CD164Q04900 197 aa5.45□□□□□ -1.54
USP41-201ENST00000292729 Q6Q795 121 aa5.45□□□□□ -1.54
USP41-201ENST00000292729 hADV29S1A0JD25 119 aa5.44□□□□□ -1.54
USP41-201ENST00000292729 TMEM256-PLSCR3K7ERE1 68 aa5.44□□□□□ -1.54
USP41-201ENST00000292729 C21orf62-AS1Q17RA5 79 aa5.44□□□□□ -1.54
USP41-201ENST00000292729 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.44□□□□□ -1.54
USP41-201ENST00000292729 BAALC-AS2P0C853 105 aa5.43□□□□□ -1.54
USP41-201ENST00000292729 SPRR1BP22528 89 aa5.43□□□□□ -1.54
USP41-201ENST00000292729 Q5XG85 94 aa5.43□□□□□ -1.54
USP41-201ENST00000292729 DHRS4-AS1Q9P1J3 65 aa5.43□□□□□ -1.54
USP41-201ENST00000292729 ST20-AS1Q8NBB2 130 aa5.42□□□□□ -1.54
USP41-201ENST00000292729 LAMTOR3Q9UHA4 124 aa5.42□□□□□ -1.54
USP41-201ENST00000292729 JMJD7-PLA2G4BH0Y9G9 81 aa5.41□□□□□ -1.54
USP41-201ENST00000292729 LINC00846Q9NV44 126 aa5.41□□□□□ -1.54
USP41-201ENST00000292729 FAM240AA0A1B0GVK7 77 aa5.4□□□□□ -1.54
USP41-201ENST00000292729 C1orf195Q5TG92 126 aa5.4□□□□□ -1.54
USP41-201ENST00000292729 OBSCN-AS1Q96MR7 158 aa5.39□□□□□ -1.55
USP41-201ENST00000292729 TEX49A0A1B0GTD5 131 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms