RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 C9orf92A6NGG3 77 aa7□□□□□ -1.29
PKNOX1-201ENST00000291547 PRR34Q9NV39 138 aa7□□□□□ -1.29
PKNOX1-201ENST00000291547 ZNF861PO60384 105 aa7□□□□□ -1.29
PKNOX1-201ENST00000291547 C15orf56Q8N910 161 aa7□□□□□ -1.29
PKNOX1-201ENST00000291547 ATMQ13315 3056 aa7□□□□□ -1.29
PKNOX1-201ENST00000291547 A0A1W2PNM2 257 aa6.99□□□□□ -1.29
PKNOX1-201ENST00000291547 ASPMQ8IZT6 3477 aa6.99□□□□□ -1.29
PKNOX1-201ENST00000291547 LINC00304Q8N9R0 145 aa6.99□□□□□ -1.29
PKNOX1-201ENST00000291547 UNC79Q9P2D8 2635 aa6.99□□□□□ -1.29
PKNOX1-201ENST00000291547 LOC400499M0QZD8 3231 aa6.98□□□□□ -1.29
PKNOX1-201ENST00000291547 PRR26Q8N8Z3 221 aa6.98□□□□□ -1.29
PKNOX1-201ENST00000291547 MAST4O15021 2626 aa6.98□□□□□ -1.29
PKNOX1-201ENST00000291547 ANAPC11Q9NYG5 84 aa6.97□□□□□ -1.29
PKNOX1-201ENST00000291547 FLG2Q5D862 2391 aaPredicted RBP6.97□□□□□ -1.29
PKNOX1-201ENST00000291547 IGLV5-48A0A075B6I7 105 aa6.97□□□□□ -1.29
PKNOX1-201ENST00000291547 Q8N1X5 172 aa6.97□□□□□ -1.29
PKNOX1-201ENST00000291547 CSNK1G2-AS1Q8NCQ2 148 aa6.97□□□□□ -1.29
PKNOX1-201ENST00000291547 IGLV5-37A0A075B6J1 123 aa6.96□□□□□ -1.29
PKNOX1-201ENST00000291547 KRTAP10-3P60369 221 aa6.96□□□□□ -1.29
PKNOX1-201ENST00000291547 Q5VV11 94 aa6.95□□□□□ -1.3
PKNOX1-201ENST00000291547 ADGRG4Q8IZF6 3080 aa6.95□□□□□ -1.3
PKNOX1-201ENST00000291547 C9orf163Q8N9P6 203 aa6.94□□□□□ -1.3
PKNOX1-201ENST00000291547 SPENQ96T58 3664 aaKnown RBP6.93□□□□□ -1.3
PKNOX1-201ENST00000291547 J3QL48 77 aa6.93□□□□□ -1.3
PKNOX1-201ENST00000291547 KALRNO60229 2985 aa6.93□□□□□ -1.3
PKNOX1-201ENST00000291547 PLA2G2DQ9UNK4 145 aa6.92□□□□□ -1.3
PKNOX1-201ENST00000291547 COL12A1Q99715 3063 aa6.92□□□□□ -1.3
PKNOX1-201ENST00000291547 TLX1NBP0CAT3 122 aa6.92□□□□□ -1.3
PKNOX1-201ENST00000291547 MAP1AP78559 2803 aaPredicted RBP6.92□□□□□ -1.3
PKNOX1-201ENST00000291547 Q8N9P0 234 aaPredicted RBP6.91□□□□□ -1.3
PKNOX1-201ENST00000291547 ASB16-AS1Q495Z4 193 aa6.89□□□□□ -1.31
PKNOX1-201ENST00000291547 SPRR4Q96PI1 79 aa6.89□□□□□ -1.31
PKNOX1-201ENST00000291547 ITPR1Q14643 2758 aa6.89□□□□□ -1.31
PKNOX1-201ENST00000291547 WWC2-AS2Q96NR7 200 aa6.89□□□□□ -1.31
PKNOX1-201ENST00000291547 GIG44P09565 113 aaPredicted RBP6.88□□□□□ -1.31
PKNOX1-201ENST00000291547 PSORS1C2Q9UIG4 136 aa6.87□□□□□ -1.31
PKNOX1-201ENST00000291547 A0A087WTM6 91 aa6.87□□□□□ -1.31
PKNOX1-201ENST00000291547 IGLV7-43P04211 117 aa6.87□□□□□ -1.31
PKNOX1-201ENST00000291547 ZFHX4Q86UP3 3567 aa6.87□□□□□ -1.31
PKNOX1-201ENST00000291547 LINC01558Q9Y6Z2 57 aa6.86□□□□□ -1.31
PKNOX1-201ENST00000291547 BAHCC1Q9P281 2608 aa6.86□□□□□ -1.31
PKNOX1-201ENST00000291547 SMR3BP02814 79 aaPredicted RBP6.86□□□□□ -1.31
PKNOX1-201ENST00000291547 NBEAQ8NFP9 2946 aa6.85□□□□□ -1.31
PKNOX1-201ENST00000291547 LRBAP50851 2863 aa6.85□□□□□ -1.31
PKNOX1-201ENST00000291547 CFAP47Q6ZTR5 3102 aa6.85□□□□□ -1.31
PKNOX1-201ENST00000291547 LINC00612Q8N6U2 182 aa6.85□□□□□ -1.31
PKNOX1-201ENST00000291547 C19orf73Q9NVV2 129 aa6.85□□□□□ -1.31
PKNOX1-201ENST00000291547 A0A1B0GU33 70 aa6.84□□□□□ -1.31
PKNOX1-201ENST00000291547 ZZEF1O43149 2961 aa6.84□□□□□ -1.31
PKNOX1-201ENST00000291547 CASC10Q5T4H9 136 aa6.84□□□□□ -1.32
PKNOX1-201ENST00000291547 IGLV7-46A0A075B6I9 117 aa6.83□□□□□ -1.32
PKNOX1-201ENST00000291547 TEX15Q9BXT5 2789 aa6.83□□□□□ -1.32
PKNOX1-201ENST00000291547 KRTAP10-11P60412 298 aa6.82□□□□□ -1.32
PKNOX1-201ENST00000291547 PRAC1Q96KF2 57 aa6.82□□□□□ -1.32
PKNOX1-201ENST00000291547 K7EIL1 84 aa6.82□□□□□ -1.32
PKNOX1-201ENST00000291547 TEP1Q99973 2627 aaKnown RBP6.82□□□□□ -1.32
PKNOX1-201ENST00000291547 UBR5O95071 2799 aaPredicted RBP6.82□□□□□ -1.32
PKNOX1-201ENST00000291547 A6NN06 94 aa6.82□□□□□ -1.32
PKNOX1-201ENST00000291547 DCHS1Q96JQ0 3298 aa6.81□□□□□ -1.32
PKNOX1-201ENST00000291547 LAMA5O15230 3695 aa6.81□□□□□ -1.32
PKNOX1-201ENST00000291547 UTP20O75691 2785 aaKnown RBP6.81□□□□□ -1.32
PKNOX1-201ENST00000291547 STAB1Q9NY15 2570 aa6.81□□□□□ -1.32
PKNOX1-201ENST00000291547 CAMK2N1Q7Z7J9 78 aa6.8□□□□□ -1.32
PKNOX1-201ENST00000291547 HRES1P13985 223 aa6.8□□□□□ -1.32
PKNOX1-201ENST00000291547 CNBPP62633 177 aaKnown RBP6.79□□□□□ -1.32
PKNOX1-201ENST00000291547 GCN1Q92616 2671 aaKnown RBP6.78□□□□□ -1.32
PKNOX1-201ENST00000291547 ITPR2Q14571 2701 aa6.77□□□□□ -1.33
PKNOX1-201ENST00000291547 APCP25054 2843 aa6.76□□□□□ -1.33
PKNOX1-201ENST00000291547 HRNRQ86YZ3 2850 aaPredicted RBP6.76□□□□□ -1.33
PKNOX1-201ENST00000291547 LINC00483Q53H64 154 aa6.75□□□□□ -1.33
PKNOX1-201ENST00000291547 A0A0A0MQY5 61 aa6.74□□□□□ -1.33
PKNOX1-201ENST00000291547 ZCCHC13Q8WW36 166 aaKnown RBP6.74□□□□□ -1.33
PKNOX1-201ENST00000291547 CSAG1Q6PB30 78 aa6.72□□□□□ -1.33
PKNOX1-201ENST00000291547 LCE6AA0A183 80 aa6.72□□□□□ -1.33
PKNOX1-201ENST00000291547 SETXQ7Z333 2677 aaKnown RBP6.7□□□□□ -1.34
PKNOX1-201ENST00000291547 A0A087X002 238 aa6.7□□□□□ -1.34
PKNOX1-201ENST00000291547 Q6ZSA8 131 aa6.7□□□□□ -1.34
PKNOX1-201ENST00000291547 MMP24-AS1A0A0U1RRL7 71 aa6.69□□□□□ -1.34
PKNOX1-201ENST00000291547 DMAC1Q96GE9 116 aa6.69□□□□□ -1.34
PKNOX1-201ENST00000291547 KMT2BQ9UMN6 2715 aaPredicted RBP6.69□□□□□ -1.34
PKNOX1-201ENST00000291547 SPINK7P58062 85 aa6.68□□□□□ -1.34
PKNOX1-201ENST00000291547 RELNP78509 3460 aa6.67□□□□□ -1.34
PKNOX1-201ENST00000291547 COL6A5A8TX70 2615 aa6.67□□□□□ -1.34
PKNOX1-201ENST00000291547 TACC2O95359 2948 aa6.66□□□□□ -1.34
PKNOX1-201ENST00000291547 HIVEP1P15822 2718 aa6.66□□□□□ -1.34
PKNOX1-201ENST00000291547 CRYBG3Q68DQ2 2970 aa6.64□□□□□ -1.35
PKNOX1-201ENST00000291547 CELSR2Q9HCU4 2923 aa6.64□□□□□ -1.35
PKNOX1-201ENST00000291547 STAB2Q8WWQ8 2551 aa6.63□□□□□ -1.35
PKNOX1-201ENST00000291547 ZANQ9Y493 2812 aa6.63□□□□□ -1.35
PKNOX1-201ENST00000291547 NBEAL1Q6ZS30 2694 aa6.62□□□□□ -1.35
PKNOX1-201ENST00000291547 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.62□□□□□ -1.35
PKNOX1-201ENST00000291547 BSNQ9UPA5 3926 aa6.61□□□□□ -1.35
PKNOX1-201ENST00000291547 DMBT1Q9UGM3 2413 aaPredicted RBP6.61□□□□□ -1.35
PKNOX1-201ENST00000291547 DCHS2Q6V1P9 2916 aa6.6□□□□□ -1.35
PKNOX1-201ENST00000291547 TNP2Q05952 138 aa6.6□□□□□ -1.35
PKNOX1-201ENST00000291547 Q5W150 140 aa6.6□□□□□ -1.35
PKNOX1-201ENST00000291547 NSD1Q96L73 2696 aaPredicted RBP6.59□□□□□ -1.35
PKNOX1-201ENST00000291547 NOTCH1P46531 2555 aa6.58□□□□□ -1.36
PKNOX1-201ENST00000291547 Q8NDZ9 215 aa6.58□□□□□ -1.36
PKNOX1-201ENST00000291547 LINC00472Q9H8W2 130 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms