RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 A0A1W2PNM2 257 aa10.26□□□□□ -0.77
HIF3A-203ENST00000291300 PSORS1C2Q9UIG4 136 aa10.26□□□□□ -0.77
HIF3A-203ENST00000291300 UBL5Q9BZL1 73 aa10.25□□□□□ -0.77
HIF3A-203ENST00000291300 C1orf137Q5JT78 98 aa10.25□□□□□ -0.77
HIF3A-203ENST00000291300 A0A087WVE0 104 aa10.24□□□□□ -0.77
HIF3A-203ENST00000291300 HAMPP81172 84 aa10.24□□□□□ -0.77
HIF3A-203ENST00000291300 IMUPQ9GZP8 106 aa10.24□□□□□ -0.77
HIF3A-203ENST00000291300 KRTAP10-1P60331 282 aa10.22□□□□□ -0.77
HIF3A-203ENST00000291300 FAM236AA0A1B0GUQ0 79 aa10.21□□□□□ -0.77
HIF3A-203ENST00000291300 FAM236BA0A1B0GV22 79 aa10.21□□□□□ -0.77
HIF3A-203ENST00000291300 SCXQ7RTU7 201 aa10.2□□□□□ -0.78
HIF3A-203ENST00000291300 CIRBP-AS1Q8TBR5 109 aa10.19□□□□□ -0.78
HIF3A-203ENST00000291300 LRP1BQ9NZR2 4599 aa10.19□□□□□ -0.78
HIF3A-203ENST00000291300 IGFL1Q6UW32 110 aa10.19□□□□□ -0.78
HIF3A-203ENST00000291300 SPRR1BP22528 89 aa10.18□□□□□ -0.78
HIF3A-203ENST00000291300 HIST1H4AP62805 103 aaKnown RBP10.18□□□□□ -0.78
HIF3A-203ENST00000291300 Q8NBF4 154 aa10.18□□□□□ -0.78
HIF3A-203ENST00000291300 ANAPC13Q9BS18 74 aa10.17□□□□□ -0.78
HIF3A-203ENST00000291300 PKHD1P08F94 4074 aa10.17□□□□□ -0.78
HIF3A-203ENST00000291300 F8WEM9 126 aa10.16□□□□□ -0.78
HIF3A-203ENST00000291300 IGLV8-61A0A075B6I0 122 aa10.15□□□□□ -0.79
HIF3A-203ENST00000291300 ATP5EP2Q5VTU8 51 aa10.15□□□□□ -0.79
HIF3A-203ENST00000291300 Q6ZSA8 131 aa10.13□□□□□ -0.79
HIF3A-203ENST00000291300 SPRR4Q96PI1 79 aa10.13□□□□□ -0.79
HIF3A-203ENST00000291300 LCE6AA0A183 80 aa10.12□□□□□ -0.79
HIF3A-203ENST00000291300 ANAPC11Q9NYG5 84 aa10.12□□□□□ -0.79
HIF3A-203ENST00000291300 KMT2CQ8NEZ4 4911 aaKnown RBP10.11□□□□□ -0.79
HIF3A-203ENST00000291300 ZNF861PO60384 105 aa10.11□□□□□ -0.79
HIF3A-203ENST00000291300 NREPQ16612 68 aa10.11□□□□□ -0.79
HIF3A-203ENST00000291300 RYR2Q92736 4967 aa10.11□□□□□ -0.79
HIF3A-203ENST00000291300 Q8N9L7 120 aa10.1□□□□□ -0.79
HIF3A-203ENST00000291300 CRYGAP11844 174 aa10.1□□□□□ -0.79
HIF3A-203ENST00000291300 CXCL6P80162 114 aa10.09□□□□□ -0.79
HIF3A-203ENST00000291300 IGLV7-43P04211 117 aa10.08□□□□□ -0.8
HIF3A-203ENST00000291300 IGLV9-49A0A0B4J1Y8 123 aa10.07□□□□□ -0.8
HIF3A-203ENST00000291300 LINC00483Q53H64 154 aa10.07□□□□□ -0.8
HIF3A-203ENST00000291300 DYNC1H1Q14204 4646 aaKnown RBP10.05□□□□□ -0.8
HIF3A-203ENST00000291300 CCDC179H3BU77 68 aa10.05□□□□□ -0.8
HIF3A-203ENST00000291300 A0A087WSZ3 146 aa10.04□□□□□ -0.8
HIF3A-203ENST00000291300 BPY2O14599 106 aa10.04□□□□□ -0.8
HIF3A-203ENST00000291300 A0A1B0GW54 56 aa10.03□□□□□ -0.8
HIF3A-203ENST00000291300 DEFB116Q30KQ4 102 aa10.03□□□□□ -0.8
HIF3A-203ENST00000291300 VPS13BQ7Z7G8 4022 aa10.03□□□□□ -0.8
HIF3A-203ENST00000291300 IGKV4-1P06312 121 aa10.01□□□□□ -0.81
HIF3A-203ENST00000291300 C9orf153Q5TBE3 101 aa10.01□□□□□ -0.81
HIF3A-203ENST00000291300 ZNF706Q9Y5V0 76 aaPredicted RBP9.99□□□□□ -0.81
HIF3A-203ENST00000291300 DSCR10P59022 87 aa9.98□□□□□ -0.81
HIF3A-203ENST00000291300 SVIPQ8NHG7 77 aa9.98□□□□□ -0.81
HIF3A-203ENST00000291300 A0A1B0GVY2 172 aa9.98□□□□□ -0.81
HIF3A-203ENST00000291300 ATOX1O00244 68 aa9.98□□□□□ -0.81
HIF3A-203ENST00000291300 MOBPQ13875 183 aa9.98□□□□□ -0.81
HIF3A-203ENST00000291300 HRCT1Q6UXD1 115 aa9.97□□□□□ -0.81
HIF3A-203ENST00000291300 LINC00336Q6ZUF6 198 aa9.95□□□□□ -0.82
HIF3A-203ENST00000291300 K7EQZ3 153 aa9.93□□□□□ -0.82
HIF3A-203ENST00000291300 APOBP04114 4563 aaKnown RBP9.92□□□□□ -0.82
HIF3A-203ENST00000291300 RPL37AP61513 92 aaKnown RBP9.92□□□□□ -0.82
HIF3A-203ENST00000291300 COX7CP15954 63 aa9.9□□□□□ -0.82
HIF3A-203ENST00000291300 SERP2Q8N6R1 65 aa9.89□□□□□ -0.83
HIF3A-203ENST00000291300 LINC00472Q9H8W2 130 aa9.89□□□□□ -0.83
HIF3A-203ENST00000291300 RYR3Q15413 4870 aa9.88□□□□□ -0.83
HIF3A-203ENST00000291300 A0A087X002 238 aa9.88□□□□□ -0.83
HIF3A-203ENST00000291300 FAT1Q14517 4588 aa9.87□□□□□ -0.83
HIF3A-203ENST00000291300 UQCRQO14949 82 aa9.87□□□□□ -0.83
HIF3A-203ENST00000291300 CYSTM1Q9H1C7 97 aa9.86□□□□□ -0.83
HIF3A-203ENST00000291300 SMR3BP02814 79 aaPredicted RBP9.85□□□□□ -0.83
HIF3A-203ENST00000291300 Q96NJ1 140 aa9.85□□□□□ -0.83
HIF3A-203ENST00000291300 KRTAP13-2Q52LG2 175 aa9.84□□□□□ -0.83
HIF3A-203ENST00000291300 KRTAP1-4P0C5Y4 121 aa9.83□□□□□ -0.84
HIF3A-203ENST00000291300 TRAV7A0A075B6U4 112 aa9.79□□□□□ -0.84
HIF3A-203ENST00000291300 OCR1Q9BZK8 76 aa9.77□□□□□ -0.85
HIF3A-203ENST00000291300 A8MWP4 228 aa9.76□□□□□ -0.85
HIF3A-203ENST00000291300 WFDC13Q8IUB5 93 aa9.76□□□□□ -0.85
HIF3A-203ENST00000291300 PRR15Q8IV56 129 aa9.76□□□□□ -0.85
HIF3A-203ENST00000291300 HCG22E2RYF7 251 aa9.76□□□□□ -0.85
HIF3A-203ENST00000291300 SSBP3-AS1Q7Z2R9 100 aa9.74□□□□□ -0.85
HIF3A-203ENST00000291300 C20orf197Q8N268 126 aa9.74□□□□□ -0.85
HIF3A-203ENST00000291300 KRTAP10-4P60372 401 aaPredicted RBP9.73□□□□□ -0.85
HIF3A-203ENST00000291300 FAM229BQ4G0N7 80 aa9.73□□□□□ -0.85
HIF3A-203ENST00000291300 SS18L2Q9UHA2 77 aa9.73□□□□□ -0.85
HIF3A-203ENST00000291300 PLA2G1BP04054 148 aaKnown RBP9.71□□□□□ -0.85
HIF3A-203ENST00000291300 SMIM20Q8N5G0 67 aa9.71□□□□□ -0.85
HIF3A-203ENST00000291300 KRTAP29-1A8MX34 341 aaPredicted RBP9.71□□□□□ -0.86
HIF3A-203ENST00000291300 SNURFQ9Y675 71 aa9.7□□□□□ -0.86
HIF3A-203ENST00000291300 J3KT08 172 aa9.69□□□□□ -0.86
HIF3A-203ENST00000291300 CD164Q04900 197 aa9.68□□□□□ -0.86
HIF3A-203ENST00000291300 SPINK6Q6UWN8 80 aa9.68□□□□□ -0.86
HIF3A-203ENST00000291300 MMP24-AS1A0A0U1RRL7 71 aa9.67□□□□□ -0.86
HIF3A-203ENST00000291300 CASC2Q6XLA1 102 aa9.66□□□□□ -0.86
HIF3A-203ENST00000291300 NOTCH2NLQ7Z3S9 236 aa9.66□□□□□ -0.86
HIF3A-203ENST00000291300 PRR26Q8N8Z3 221 aa9.65□□□□□ -0.86
HIF3A-203ENST00000291300 HSPG2P98160 4391 aa9.64□□□□□ -0.87
HIF3A-203ENST00000291300 IGHV6-1A0A0B4J1U7 121 aa9.64□□□□□ -0.87
HIF3A-203ENST00000291300 NDUFB1O75438 58 aa9.63□□□□□ -0.87
HIF3A-203ENST00000291300 A0A1B0GVX0 72 aa9.62□□□□□ -0.87
HIF3A-203ENST00000291300 TYMSOSQ8TAI1 123 aa9.62□□□□□ -0.87
HIF3A-203ENST00000291300 TMEM254Q8TBM7 123 aa9.62□□□□□ -0.87
HIF3A-203ENST00000291300 KLKP1Q107X0 134 aa9.61□□□□□ -0.87
HIF3A-203ENST00000291300 C8orf17Q9NRJ1 99 aa9.61□□□□□ -0.87
HIF3A-203ENST00000291300 hDV103S1A0JD37 113 aa9.59□□□□□ -0.87
HIF3A-203ENST00000291300 A0A0U1RQV1 116 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms