RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 C8orf17Q9NRJ1 99 aa7.32□□□□□ -1.24
NPC1L1-201ENST00000289547 LINC00313P59037 77 aa7.31□□□□□ -1.24
NPC1L1-201ENST00000289547 FLNCQ14315 2725 aa7.31□□□□□ -1.24
NPC1L1-201ENST00000289547 STAB1Q9NY15 2570 aa7.3□□□□□ -1.24
NPC1L1-201ENST00000289547 C15orf56Q8N910 161 aa7.3□□□□□ -1.24
NPC1L1-201ENST00000289547 MYO15AQ9UKN7 3530 aa7.3□□□□□ -1.24
NPC1L1-201ENST00000289547 CNBPP62633 177 aaKnown RBP7.3□□□□□ -1.24
NPC1L1-201ENST00000289547 IGLV5-48A0A075B6I7 105 aa7.3□□□□□ -1.24
NPC1L1-201ENST00000289547 SPACA4Q8TDM5 124 aa7.3□□□□□ -1.24
NPC1L1-201ENST00000289547 H3BS24 57 aa7.29□□□□□ -1.24
NPC1L1-201ENST00000289547 TNP2Q05952 138 aa7.29□□□□□ -1.24
NPC1L1-201ENST00000289547 PRR26Q8N8Z3 221 aa7.28□□□□□ -1.24
NPC1L1-201ENST00000289547 Q8N9P0 234 aaPredicted RBP7.28□□□□□ -1.24
NPC1L1-201ENST00000289547 DMXL2Q8TDJ6 3036 aa7.28□□□□□ -1.24
NPC1L1-201ENST00000289547 DSCR10P59022 87 aa7.28□□□□□ -1.24
NPC1L1-201ENST00000289547 TYMSOSQ8TAI1 123 aa7.28□□□□□ -1.24
NPC1L1-201ENST00000289547 TLX1NBP0CAT3 122 aa7.26□□□□□ -1.25
NPC1L1-201ENST00000289547 EYSQ5T1H1 3165 aa7.26□□□□□ -1.25
NPC1L1-201ENST00000289547 Q75L30 129 aa7.26□□□□□ -1.25
NPC1L1-201ENST00000289547 TEX15Q9BXT5 2789 aa7.26□□□□□ -1.25
NPC1L1-201ENST00000289547 REV3LO60673 3130 aa7.26□□□□□ -1.25
NPC1L1-201ENST00000289547 UBR5O95071 2799 aaPredicted RBP7.25□□□□□ -1.25
NPC1L1-201ENST00000289547 A0A1B0GVX0 72 aa7.25□□□□□ -1.25
NPC1L1-201ENST00000289547 SMR3BP02814 79 aaPredicted RBP7.24□□□□□ -1.25
NPC1L1-201ENST00000289547 LINC01554Q52M75 96 aa7.24□□□□□ -1.25
NPC1L1-201ENST00000289547 PRAC1Q96KF2 57 aa7.24□□□□□ -1.25
NPC1L1-201ENST00000289547 Q5VV11 94 aa7.24□□□□□ -1.25
NPC1L1-201ENST00000289547 DMXL1Q9Y485 3027 aa7.24□□□□□ -1.25
NPC1L1-201ENST00000289547 MAP1AP78559 2803 aaPredicted RBP7.24□□□□□ -1.25
NPC1L1-201ENST00000289547 KMT2BQ9UMN6 2715 aaPredicted RBP7.22□□□□□ -1.25
NPC1L1-201ENST00000289547 PLA2G2DQ9UNK4 145 aa7.21□□□□□ -1.26
NPC1L1-201ENST00000289547 HIVEP1P15822 2718 aa7.2□□□□□ -1.26
NPC1L1-201ENST00000289547 IGLV7-46A0A075B6I9 117 aa7.2□□□□□ -1.26
NPC1L1-201ENST00000289547 KALRNO60229 2985 aa7.2□□□□□ -1.26
NPC1L1-201ENST00000289547 ZNF861PO60384 105 aa7.19□□□□□ -1.26
NPC1L1-201ENST00000289547 SPRR4Q96PI1 79 aa7.19□□□□□ -1.26
NPC1L1-201ENST00000289547 ITPR2Q14571 2701 aa7.19□□□□□ -1.26
NPC1L1-201ENST00000289547 Q8NDZ9 215 aa7.19□□□□□ -1.26
NPC1L1-201ENST00000289547 TACC2O95359 2948 aa7.18□□□□□ -1.26
NPC1L1-201ENST00000289547 LINC01558Q9Y6Z2 57 aa7.17□□□□□ -1.26
NPC1L1-201ENST00000289547 ATMQ13315 3056 aa7.16□□□□□ -1.26
NPC1L1-201ENST00000289547 Q96NJ1 140 aa7.16□□□□□ -1.26
NPC1L1-201ENST00000289547 IGLV7-43P04211 117 aa7.16□□□□□ -1.26
NPC1L1-201ENST00000289547 BOD1L1Q8NFC6 3051 aa7.15□□□□□ -1.26
NPC1L1-201ENST00000289547 APCP25054 2843 aa7.15□□□□□ -1.26
NPC1L1-201ENST00000289547 COL12A1Q99715 3063 aa7.14□□□□□ -1.27
NPC1L1-201ENST00000289547 UTP20O75691 2785 aaKnown RBP7.13□□□□□ -1.27
NPC1L1-201ENST00000289547 CRIPTQ9P021 101 aa7.13□□□□□ -1.27
NPC1L1-201ENST00000289547 ADGRG4Q8IZF6 3080 aa7.12□□□□□ -1.27
NPC1L1-201ENST00000289547 SPINK7P58062 85 aa7.12□□□□□ -1.27
NPC1L1-201ENST00000289547 PSORS1C2Q9UIG4 136 aa7.12□□□□□ -1.27
NPC1L1-201ENST00000289547 LINC00304Q8N9R0 145 aa7.12□□□□□ -1.27
NPC1L1-201ENST00000289547 CFAP47Q6ZTR5 3102 aa7.11□□□□□ -1.27
NPC1L1-201ENST00000289547 ANAPC11Q9NYG5 84 aa7.1□□□□□ -1.27
NPC1L1-201ENST00000289547 ITPR1Q14643 2758 aa7.09□□□□□ -1.27
NPC1L1-201ENST00000289547 IGLV5-37A0A075B6J1 123 aa7.08□□□□□ -1.28
NPC1L1-201ENST00000289547 NSD1Q96L73 2696 aaPredicted RBP7.07□□□□□ -1.28
NPC1L1-201ENST00000289547 WDFY3Q8IZQ1 3526 aa7.07□□□□□ -1.28
NPC1L1-201ENST00000289547 CSAG1Q6PB30 78 aa7.06□□□□□ -1.28
NPC1L1-201ENST00000289547 Q6ZR54 194 aa7.06□□□□□ -1.28
NPC1L1-201ENST00000289547 HRES1P13985 223 aa7.06□□□□□ -1.28
NPC1L1-201ENST00000289547 PLAC8Q9NZF1 115 aa7.05□□□□□ -1.28
NPC1L1-201ENST00000289547 Q8N1X5 172 aa7.05□□□□□ -1.28
NPC1L1-201ENST00000289547 KRTAP1-5Q9BYS1 174 aa7.05□□□□□ -1.28
NPC1L1-201ENST00000289547 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.04□□□□□ -1.28
NPC1L1-201ENST00000289547 NOTCH1P46531 2555 aa7.04□□□□□ -1.28
NPC1L1-201ENST00000289547 MMP24-AS1A0A0U1RRL7 71 aa7.04□□□□□ -1.28
NPC1L1-201ENST00000289547 DCHS1Q96JQ0 3298 aa7□□□□□ -1.29
NPC1L1-201ENST00000289547 Q5VSD8 79 aa6.99□□□□□ -1.29
NPC1L1-201ENST00000289547 A0A0D9SG42 100 aa6.99□□□□□ -1.29
NPC1L1-201ENST00000289547 TENM4Q6N022 2769 aa6.99□□□□□ -1.29
NPC1L1-201ENST00000289547 LOC400499M0QZD8 3231 aa6.97□□□□□ -1.29
NPC1L1-201ENST00000289547 ZZEF1O43149 2961 aa6.97□□□□□ -1.29
NPC1L1-201ENST00000289547 LRBAP50851 2863 aa6.97□□□□□ -1.29
NPC1L1-201ENST00000289547 SPRR1AP35321 89 aa6.96□□□□□ -1.29
NPC1L1-201ENST00000289547 KRTAP10-2P60368 255 aa6.96□□□□□ -1.29
NPC1L1-201ENST00000289547 NBEAL2Q6ZNJ1 2754 aa6.96□□□□□ -1.3
NPC1L1-201ENST00000289547 KRTAP10-1P60331 282 aa6.96□□□□□ -1.3
NPC1L1-201ENST00000289547 ZCCHC13Q8WW36 166 aaKnown RBP6.95□□□□□ -1.3
NPC1L1-201ENST00000289547 A0A1B0GU33 70 aa6.95□□□□□ -1.3
NPC1L1-201ENST00000289547 LINC00472Q9H8W2 130 aa6.95□□□□□ -1.3
NPC1L1-201ENST00000289547 NBEAL1Q6ZS30 2694 aa6.94□□□□□ -1.3
NPC1L1-201ENST00000289547 DMBT1Q9UGM3 2413 aaPredicted RBP6.94□□□□□ -1.3
NPC1L1-201ENST00000289547 ASH1LQ9NR48 2969 aaKnown RBP6.93□□□□□ -1.3
NPC1L1-201ENST00000289547 KRTAP26-1Q6PEX3 210 aa6.92□□□□□ -1.3
NPC1L1-201ENST00000289547 A8MU10 97 aa6.91□□□□□ -1.3
NPC1L1-201ENST00000289547 C9orf92A6NGG3 77 aa6.9□□□□□ -1.31
NPC1L1-201ENST00000289547 A6NN06 94 aa6.9□□□□□ -1.31
NPC1L1-201ENST00000289547 FLG2Q5D862 2391 aaPredicted RBP6.87□□□□□ -1.31
NPC1L1-201ENST00000289547 COX6B2Q6YFQ2 88 aa6.87□□□□□ -1.31
NPC1L1-201ENST00000289547 KRTAP29-1A8MX34 341 aaPredicted RBP6.85□□□□□ -1.31
NPC1L1-201ENST00000289547 Q6ZRN7 208 aaPredicted RBP6.85□□□□□ -1.31
NPC1L1-201ENST00000289547 Q5W150 140 aa6.84□□□□□ -1.31
NPC1L1-201ENST00000289547 LUZP6Q538Z0 58 aa6.83□□□□□ -1.32
NPC1L1-201ENST00000289547 HRNRQ86YZ3 2850 aaPredicted RBP6.83□□□□□ -1.32
NPC1L1-201ENST00000289547 SPRR1BP22528 89 aa6.83□□□□□ -1.32
NPC1L1-201ENST00000289547 ASB16-AS1Q495Z4 193 aa6.82□□□□□ -1.32
NPC1L1-201ENST00000289547 DMAC1Q96GE9 116 aa6.81□□□□□ -1.32
NPC1L1-201ENST00000289547 CELSR2Q9HCU4 2923 aa6.8□□□□□ -1.32
NPC1L1-201ENST00000289547 ASPMQ8IZT6 3477 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms