RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SACSQ9NZJ4 4579 aa11.11□□□□□ -0.63
CAPN1-201ENST00000279247 PKIGQ9Y2B9 76 aa11.11□□□□□ -0.63
CAPN1-201ENST00000279247 DNAH17Q9UFH2 4485 aa11.09□□□□□ -0.63
CAPN1-201ENST00000279247 ATOX1O00244 68 aa11.09□□□□□ -0.63
CAPN1-201ENST00000279247 KMT2CQ8NEZ4 4911 aaKnown RBP11.07□□□□□ -0.64
CAPN1-201ENST00000279247 BCE1O60756 84 aa11.07□□□□□ -0.64
CAPN1-201ENST00000279247 IGFL1Q6UW32 110 aa11.07□□□□□ -0.64
CAPN1-201ENST00000279247 Q8NBF4 154 aa11.07□□□□□ -0.64
CAPN1-201ENST00000279247 BPY2O14599 106 aa11.07□□□□□ -0.64
CAPN1-201ENST00000279247 DEFB116Q30KQ4 102 aa11.06□□□□□ -0.64
CAPN1-201ENST00000279247 KRTAP10-2P60368 255 aa11.05□□□□□ -0.64
CAPN1-201ENST00000279247 C9orf153Q5TBE3 101 aa11.05□□□□□ -0.64
CAPN1-201ENST00000279247 SS18L2Q9UHA2 77 aa11.04□□□□□ -0.64
CAPN1-201ENST00000279247 CXCL6P80162 114 aa11.04□□□□□ -0.64
CAPN1-201ENST00000279247 PSORS1C2Q9UIG4 136 aa11.04□□□□□ -0.64
CAPN1-201ENST00000279247 DNAH11Q96DT5 4516 aa11.03□□□□□ -0.64
CAPN1-201ENST00000279247 ALMS1Q8TCU4 4167 aa11.02□□□□□ -0.65
CAPN1-201ENST00000279247 FAT2Q9NYQ8 4349 aa11.02□□□□□ -0.65
CAPN1-201ENST00000279247 IGLV9-49A0A0B4J1Y8 123 aa11.02□□□□□ -0.65
CAPN1-201ENST00000279247 ANAPC11Q9NYG5 84 aa11.02□□□□□ -0.65
CAPN1-201ENST00000279247 A0A087WSZ3 146 aa11.01□□□□□ -0.65
CAPN1-201ENST00000279247 COX7CP15954 63 aa11.01□□□□□ -0.65
CAPN1-201ENST00000279247 DNAH5Q8TE73 4624 aa11□□□□□ -0.65
CAPN1-201ENST00000279247 UQCRQO14949 82 aa10.99□□□□□ -0.65
CAPN1-201ENST00000279247 FAM30AQ9NZY2 134 aa10.99□□□□□ -0.65
CAPN1-201ENST00000279247 H0Y9J4 135 aa10.98□□□□□ -0.65
CAPN1-201ENST00000279247 SERP2Q8N6R1 65 aa10.98□□□□□ -0.65
CAPN1-201ENST00000279247 KRTAP13-1Q8IUC0 172 aa10.96□□□□□ -0.65
CAPN1-201ENST00000279247 SPRR4Q96PI1 79 aa10.96□□□□□ -0.65
CAPN1-201ENST00000279247 CRYGAP11844 174 aa10.96□□□□□ -0.66
CAPN1-201ENST00000279247 HRCT1Q6UXD1 115 aa10.96□□□□□ -0.66
CAPN1-201ENST00000279247 PKHD1P08F94 4074 aa10.96□□□□□ -0.66
CAPN1-201ENST00000279247 PLAC8Q9NZF1 115 aa10.95□□□□□ -0.66
CAPN1-201ENST00000279247 IGKV4-1P06312 121 aa10.95□□□□□ -0.66
CAPN1-201ENST00000279247 CYSTM1Q9H1C7 97 aa10.95□□□□□ -0.66
CAPN1-201ENST00000279247 DNAH8Q96JB1 4490 aa10.95□□□□□ -0.66
CAPN1-201ENST00000279247 PKD1P98161 4303 aa10.93□□□□□ -0.66
CAPN1-201ENST00000279247 CIRBP-AS1Q8TBR5 109 aa10.92□□□□□ -0.66
CAPN1-201ENST00000279247 C20orf197Q8N268 126 aa10.9□□□□□ -0.66
CAPN1-201ENST00000279247 K7EQZ3 153 aa10.9□□□□□ -0.67
CAPN1-201ENST00000279247 RPL37AP61513 92 aaKnown RBP10.9□□□□□ -0.67
CAPN1-201ENST00000279247 SPRR1BP22528 89 aa10.89□□□□□ -0.67
CAPN1-201ENST00000279247 IGLV8-61A0A075B6I0 122 aa10.88□□□□□ -0.67
CAPN1-201ENST00000279247 DSCR10P59022 87 aa10.87□□□□□ -0.67
CAPN1-201ENST00000279247 KRTAP10-1P60331 282 aa10.87□□□□□ -0.67
CAPN1-201ENST00000279247 ZNF861PO60384 105 aa10.87□□□□□ -0.67
CAPN1-201ENST00000279247 MOBPQ13875 183 aa10.86□□□□□ -0.67
CAPN1-201ENST00000279247 SNURFQ9Y675 71 aa10.84□□□□□ -0.67
CAPN1-201ENST00000279247 RYR2Q92736 4967 aa10.84□□□□□ -0.67
CAPN1-201ENST00000279247 A0A1B0GW54 56 aa10.84□□□□□ -0.67
CAPN1-201ENST00000279247 TRAV7A0A075B6U4 112 aa10.81□□□□□ -0.68
CAPN1-201ENST00000279247 IGLV7-43P04211 117 aa10.81□□□□□ -0.68
CAPN1-201ENST00000279247 WFDC13Q8IUB5 93 aa10.81□□□□□ -0.68
CAPN1-201ENST00000279247 LCE6AA0A183 80 aa10.8□□□□□ -0.68
CAPN1-201ENST00000279247 LRP1BQ9NZR2 4599 aa10.8□□□□□ -0.68
CAPN1-201ENST00000279247 RYR3Q15413 4870 aa10.79□□□□□ -0.68
CAPN1-201ENST00000279247 ZNF706Q9Y5V0 76 aaPredicted RBP10.79□□□□□ -0.68
CAPN1-201ENST00000279247 LINC00483Q53H64 154 aa10.74□□□□□ -0.69
CAPN1-201ENST00000279247 SMIM20Q8N5G0 67 aa10.73□□□□□ -0.69
CAPN1-201ENST00000279247 HCG22E2RYF7 251 aa10.71□□□□□ -0.69
CAPN1-201ENST00000279247 OCR1Q9BZK8 76 aa10.7□□□□□ -0.7
CAPN1-201ENST00000279247 LINC00472Q9H8W2 130 aa10.7□□□□□ -0.7
CAPN1-201ENST00000279247 DYNC1H1Q14204 4646 aaKnown RBP10.69□□□□□ -0.7
CAPN1-201ENST00000279247 Q6ZSA8 131 aa10.68□□□□□ -0.7
CAPN1-201ENST00000279247 SPINK6Q6UWN8 80 aa10.67□□□□□ -0.7
CAPN1-201ENST00000279247 TMEM254Q8TBM7 123 aa10.66□□□□□ -0.7
CAPN1-201ENST00000279247 SVIPQ8NHG7 77 aa10.66□□□□□ -0.7
CAPN1-201ENST00000279247 VPS13BQ7Z7G8 4022 aa10.64□□□□□ -0.71
CAPN1-201ENST00000279247 PRR15Q8IV56 129 aa10.63□□□□□ -0.71
CAPN1-201ENST00000279247 A0A087X002 238 aa10.63□□□□□ -0.71
CAPN1-201ENST00000279247 A8MWP4 228 aa10.63□□□□□ -0.71
CAPN1-201ENST00000279247 SMR3BP02814 79 aaPredicted RBP10.63□□□□□ -0.71
CAPN1-201ENST00000279247 FAT1Q14517 4588 aa10.62□□□□□ -0.71
CAPN1-201ENST00000279247 CASC2Q6XLA1 102 aa10.61□□□□□ -0.71
CAPN1-201ENST00000279247 H7BZZ5 65 aa10.61□□□□□ -0.71
CAPN1-201ENST00000279247 TMEM258P61165 79 aa10.6□□□□□ -0.71
CAPN1-201ENST00000279247 KLKP1Q107X0 134 aa10.6□□□□□ -0.71
CAPN1-201ENST00000279247 Q96NJ1 140 aa10.6□□□□□ -0.71
CAPN1-201ENST00000279247 IGHV6-1A0A0B4J1U7 121 aa10.59□□□□□ -0.71
CAPN1-201ENST00000279247 NDUFB1O75438 58 aa10.59□□□□□ -0.71
CAPN1-201ENST00000279247 CDK2AP2O75956 126 aa10.55□□□□□ -0.72
CAPN1-201ENST00000279247 A0A1B0GVY2 172 aa10.54□□□□□ -0.72
CAPN1-201ENST00000279247 KRTAP13-2Q52LG2 175 aa10.53□□□□□ -0.72
CAPN1-201ENST00000279247 FAM236DA0A1B0GTK5 79 aa10.53□□□□□ -0.72
CAPN1-201ENST00000279247 J3KT08 172 aa10.53□□□□□ -0.72
CAPN1-201ENST00000279247 FAM236CP0DP71 79 aa10.53□□□□□ -0.72
CAPN1-201ENST00000279247 A0A0U1RQV1 116 aa10.52□□□□□ -0.73
CAPN1-201ENST00000279247 KRTAP29-1A8MX34 341 aaPredicted RBP10.52□□□□□ -0.73
CAPN1-201ENST00000279247 APOBP04114 4563 aaKnown RBP10.52□□□□□ -0.73
CAPN1-201ENST00000279247 MMP24-AS1A0A0U1RRL7 71 aa10.51□□□□□ -0.73
CAPN1-201ENST00000279247 LINC00336Q6ZUF6 198 aa10.51□□□□□ -0.73
CAPN1-201ENST00000279247 hDV103S1A0JD37 113 aa10.51□□□□□ -0.73
CAPN1-201ENST00000279247 NOTCH2NLQ7Z3S9 236 aa10.51□□□□□ -0.73
CAPN1-201ENST00000279247 NDUFS5O43920 106 aa10.5□□□□□ -0.73
CAPN1-201ENST00000279247 PLA2G1BP04054 148 aaKnown RBP10.49□□□□□ -0.73
CAPN1-201ENST00000279247 SSBP3-AS1Q7Z2R9 100 aa10.47□□□□□ -0.73
CAPN1-201ENST00000279247 LINC00208Q96KT6 92 aa10.47□□□□□ -0.73
CAPN1-201ENST00000279247 A0A1B0GVX0 72 aa10.46□□□□□ -0.73
CAPN1-201ENST00000279247 C8orf17Q9NRJ1 99 aa10.46□□□□□ -0.73
CAPN1-201ENST00000279247 KRTAP1-4P0C5Y4 121 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms