RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 COL6A5A8TX70 2615 aa11.81□□□□□ -0.52
SSC4D-201ENST00000275560 IGLV5-37A0A075B6J1 123 aa11.81□□□□□ -0.52
SSC4D-201ENST00000275560 DNAH10OSP0CZ25 163 aa11.81□□□□□ -0.52
SSC4D-201ENST00000275560 KMT2BQ9UMN6 2715 aaPredicted RBP11.8□□□□□ -0.52
SSC4D-201ENST00000275560 TRAV22A0A0B4J277 110 aa11.8□□□□□ -0.52
SSC4D-201ENST00000275560 Q1T7F1 81 aa11.8□□□□□ -0.52
SSC4D-201ENST00000275560 REG3GQ6UW15 175 aa11.8□□□□□ -0.52
SSC4D-201ENST00000275560 LINC00588Q9Y4M8 146 aa11.79□□□□□ -0.52
SSC4D-201ENST00000275560 A8MU10 97 aa11.78□□□□□ -0.52
SSC4D-201ENST00000275560 LINC00208Q96KT6 92 aa11.78□□□□□ -0.52
SSC4D-201ENST00000275560 IGKV2-24A0A0C4DH68 120 aa11.77□□□□□ -0.53
SSC4D-201ENST00000275560 NBEAL1Q6ZS30 2694 aa11.76□□□□□ -0.53
SSC4D-201ENST00000275560 A8MUN3 132 aa11.75□□□□□ -0.53
SSC4D-201ENST00000275560 V9GYY9 64 aa11.75□□□□□ -0.53
SSC4D-201ENST00000275560 CYP4F30PQ9H0H9 118 aa11.73□□□□□ -0.53
SSC4D-201ENST00000275560 COL7A1Q02388 2944 aa11.73□□□□□ -0.53
SSC4D-201ENST00000275560 J3QKU1 62 aa11.73□□□□□ -0.53
SSC4D-201ENST00000275560 MP68P56378 58 aa11.7□□□□□ -0.54
SSC4D-201ENST00000275560 PRR15Q8IV56 129 aa11.7□□□□□ -0.54
SSC4D-201ENST00000275560 A0A096LNI7 61 aa11.69□□□□□ -0.54
SSC4D-201ENST00000275560 B9D2Q9BPU9 175 aa11.67□□□□□ -0.54
SSC4D-201ENST00000275560 H0Y9P7 68 aa11.67□□□□□ -0.54
SSC4D-201ENST00000275560 KRTAP11-1Q8IUC1 163 aa11.67□□□□□ -0.54
SSC4D-201ENST00000275560 KRTAP29-1A8MX34 341 aaPredicted RBP11.66□□□□□ -0.54
SSC4D-201ENST00000275560 DNAH9Q9NYC9 4486 aa11.66□□□□□ -0.54
SSC4D-201ENST00000275560 UBE2AP49459 152 aa11.65□□□□□ -0.54
SSC4D-201ENST00000275560 NDUFB1O75438 58 aa11.65□□□□□ -0.54
SSC4D-201ENST00000275560 CASC2Q6XLA1 102 aa11.65□□□□□ -0.54
SSC4D-201ENST00000275560 CNBPP62633 177 aaKnown RBP11.64□□□□□ -0.55
SSC4D-201ENST00000275560 TENM2Q9NT68 2774 aa11.62□□□□□ -0.55
SSC4D-201ENST00000275560 SEC61GP60059 68 aa11.62□□□□□ -0.55
SSC4D-201ENST00000275560 DNAH3Q8TD57 4116 aa11.62□□□□□ -0.55
SSC4D-201ENST00000275560 CHTF8P0CG12 524 aa11.62□□□□□ -0.55
SSC4D-201ENST00000275560 Q5VV11 94 aa11.62□□□□□ -0.55
SSC4D-201ENST00000275560 PHF5AQ7RTV0 110 aaKnown RBP11.6□□□□□ -0.55
SSC4D-201ENST00000275560 PMAIP1Q13794 54 aa11.59□□□□□ -0.55
SSC4D-201ENST00000275560 HUWE1Q7Z6Z7 4374 aaKnown RBP11.59□□□□□ -0.55
SSC4D-201ENST00000275560 IGLV8-61A0A075B6I0 122 aa11.59□□□□□ -0.55
SSC4D-201ENST00000275560 KRTAP1-5Q9BYS1 174 aa11.58□□□□□ -0.56
SSC4D-201ENST00000275560 Q8N9P0 234 aaPredicted RBP11.56□□□□□ -0.56
SSC4D-201ENST00000275560 H0Y9J4 135 aa11.55□□□□□ -0.56
SSC4D-201ENST00000275560 CHKB-CPT1BH3BT56 60 aa11.55□□□□□ -0.56
SSC4D-201ENST00000275560 C16orf90A8MZG2 172 aa11.54□□□□□ -0.56
SSC4D-201ENST00000275560 PRR15LQ9BU68 103 aa11.54□□□□□ -0.56
SSC4D-201ENST00000275560 LINC00472Q9H8W2 130 aa11.54□□□□□ -0.56
SSC4D-201ENST00000275560 STAB2Q8WWQ8 2551 aa11.54□□□□□ -0.56
SSC4D-201ENST00000275560 A8MWP4 228 aa11.53□□□□□ -0.56
SSC4D-201ENST00000275560 DNAH7Q8WXX0 4024 aa11.53□□□□□ -0.56
SSC4D-201ENST00000275560 PCOTHQ58A44 107 aa11.5□□□□□ -0.57
SSC4D-201ENST00000275560 C9orf163Q8N9P6 203 aa11.5□□□□□ -0.57
SSC4D-201ENST00000275560 SPANXA2-OT1Q8N9U9 137 aa11.49□□□□□ -0.57
SSC4D-201ENST00000275560 MMP24-AS1A0A0U1RRL7 71 aa11.47□□□□□ -0.57
SSC4D-201ENST00000275560 COA5Q86WW8 74 aa11.46□□□□□ -0.58
SSC4D-201ENST00000275560 KRTAP24-1Q3LI83 254 aa11.45□□□□□ -0.58
SSC4D-201ENST00000275560 SPTSSBQ8NFR3 76 aa11.45□□□□□ -0.58
SSC4D-201ENST00000275560 H3BPC8 53 aa11.43□□□□□ -0.58
SSC4D-201ENST00000275560 LIMD2Q9BT23 127 aa11.42□□□□□ -0.58
SSC4D-201ENST00000275560 IGLV9-49A0A0B4J1Y8 123 aa11.41□□□□□ -0.58
SSC4D-201ENST00000275560 LCA10Q71F78 164 aa11.41□□□□□ -0.58
SSC4D-201ENST00000275560 PANO1I0J062 215 aa11.4□□□□□ -0.58
SSC4D-201ENST00000275560 SPRR1BP22528 89 aa11.4□□□□□ -0.58
SSC4D-201ENST00000275560 MGAM2Q2M2H8 2515 aa11.39□□□□□ -0.59
SSC4D-201ENST00000275560 CD164Q04900 197 aa11.39□□□□□ -0.59
SSC4D-201ENST00000275560 A6NED7 52 aa11.38□□□□□ -0.59
SSC4D-201ENST00000275560 IGLV7-46A0A075B6I9 117 aa11.36□□□□□ -0.59
SSC4D-201ENST00000275560 SPAG11AQ6PDA7 123 aa11.36□□□□□ -0.59
SSC4D-201ENST00000275560 FRAS1Q86XX4 4008 aa11.35□□□□□ -0.59
SSC4D-201ENST00000275560 Q96NJ1 140 aa11.35□□□□□ -0.59
SSC4D-201ENST00000275560 NDUFS5O43920 106 aa11.34□□□□□ -0.59
SSC4D-201ENST00000275560 IGHV6-1A0A0B4J1U7 121 aa11.31□□□□□ -0.6
SSC4D-201ENST00000275560 K7EIL1 84 aa11.31□□□□□ -0.6
SSC4D-201ENST00000275560 Q75L30 129 aa11.31□□□□□ -0.6
SSC4D-201ENST00000275560 UBE2DNLQ8IWF7 75 aa11.31□□□□□ -0.6
SSC4D-201ENST00000275560 MOBPQ13875 183 aa11.28□□□□□ -0.6
SSC4D-201ENST00000275560 LOC101927531A0A1B0GV80 90 aa11.27□□□□□ -0.6
SSC4D-201ENST00000275560 C8orf17Q9NRJ1 99 aa11.27□□□□□ -0.6
SSC4D-201ENST00000275560 PLECQ15149 4684 aaKnown RBP11.27□□□□□ -0.6
SSC4D-201ENST00000275560 A0A087X002 238 aa11.27□□□□□ -0.61
SSC4D-201ENST00000275560 NOTCH2NLQ7Z3S9 236 aa11.27□□□□□ -0.61
SSC4D-201ENST00000275560 ANAPC11Q9NYG5 84 aa11.27□□□□□ -0.61
SSC4D-201ENST00000275560 KRTAP13-1Q8IUC0 172 aa11.26□□□□□ -0.61
SSC4D-201ENST00000275560 ASB16-AS1Q495Z4 193 aa11.23□□□□□ -0.61
SSC4D-201ENST00000275560 HRES1P13985 223 aa11.22□□□□□ -0.61
SSC4D-201ENST00000275560 KTN1-AS1Q86SY8 53 aa11.22□□□□□ -0.61
SSC4D-201ENST00000275560 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.21□□□□□ -0.61
SSC4D-201ENST00000275560 SPINK7P58062 85 aa11.21□□□□□ -0.62
SSC4D-201ENST00000275560 ATP11AUNQ6ZP68 121 aa11.21□□□□□ -0.62
SSC4D-201ENST00000275560 Q6ZR54 194 aa11.21□□□□□ -0.62
SSC4D-201ENST00000275560 TP53AIP1Q9HCN2 124 aa11.2□□□□□ -0.62
SSC4D-201ENST00000275560 DNAH8Q96JB1 4490 aa11.19□□□□□ -0.62
SSC4D-201ENST00000275560 C14orf177Q52M58 125 aa11.19□□□□□ -0.62
SSC4D-201ENST00000275560 A0A1B0GVX0 72 aa11.18□□□□□ -0.62
SSC4D-201ENST00000275560 A6NN06 94 aa11.17□□□□□ -0.62
SSC4D-201ENST00000275560 LINC01558Q9Y6Z2 57 aa11.17□□□□□ -0.62
SSC4D-201ENST00000275560 CDC42SE1Q9NRR8 79 aa11.17□□□□□ -0.62
SSC4D-201ENST00000275560 APLNQ9ULZ1 77 aa11.17□□□□□ -0.62
SSC4D-201ENST00000275560 PLAC8Q9NZF1 115 aa11.15□□□□□ -0.62
SSC4D-201ENST00000275560 HECTD4Q9Y4D8 3996 aa11.15□□□□□ -0.62
SSC4D-201ENST00000275560 PRR26Q8N8Z3 221 aa11.14□□□□□ -0.63
SSC4D-201ENST00000275560 RBM12B-AS1Q9P1G2 102 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms