RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 HYDINQ4G0P3 5121 aa10.23□□□□□ -0.77
CCDC40-201ENST00000269318 IGLV8-61A0A075B6I0 122 aa10.23□□□□□ -0.77
CCDC40-201ENST00000269318 A0A1B0GW54 56 aa10.23□□□□□ -0.77
CCDC40-201ENST00000269318 HAMPP81172 84 aa10.23□□□□□ -0.77
CCDC40-201ENST00000269318 Q8NBF4 154 aa10.23□□□□□ -0.77
CCDC40-201ENST00000269318 F8WEM9 126 aa10.22□□□□□ -0.77
CCDC40-201ENST00000269318 CXCL6P80162 114 aa10.22□□□□□ -0.77
CCDC40-201ENST00000269318 DNAH8Q96JB1 4490 aa10.22□□□□□ -0.77
CCDC40-201ENST00000269318 KRTAP10-2P60368 255 aa10.21□□□□□ -0.77
CCDC40-201ENST00000269318 SPRR4Q96PI1 79 aa10.21□□□□□ -0.78
CCDC40-201ENST00000269318 DNAH5Q8TE73 4624 aa10.2□□□□□ -0.78
CCDC40-201ENST00000269318 SRRM2Q9UQ35 2752 aaKnown RBP10.19□□□□□ -0.78
CCDC40-201ENST00000269318 PSORS1C2Q9UIG4 136 aa10.19□□□□□ -0.78
CCDC40-201ENST00000269318 IGFL1Q6UW32 110 aa10.18□□□□□ -0.78
CCDC40-201ENST00000269318 NREPQ16612 68 aa10.17□□□□□ -0.78
CCDC40-201ENST00000269318 FAT2Q9NYQ8 4349 aa10.17□□□□□ -0.78
CCDC40-201ENST00000269318 CRYGAP11844 174 aa10.16□□□□□ -0.78
CCDC40-201ENST00000269318 A0A0G2JQZ4 141 aa10.15□□□□□ -0.78
CCDC40-201ENST00000269318 SCXQ7RTU7 201 aa10.15□□□□□ -0.78
CCDC40-201ENST00000269318 PKD1P98161 4303 aa10.15□□□□□ -0.78
CCDC40-201ENST00000269318 ATOX1O00244 68 aa10.14□□□□□ -0.79
CCDC40-201ENST00000269318 FAM30AQ9NZY2 134 aa10.14□□□□□ -0.79
CCDC40-201ENST00000269318 CCDC179H3BU77 68 aa10.12□□□□□ -0.79
CCDC40-201ENST00000269318 LINC00483Q53H64 154 aa10.1□□□□□ -0.79
CCDC40-201ENST00000269318 ZNF861PO60384 105 aa10.1□□□□□ -0.79
CCDC40-201ENST00000269318 Q6ZSA8 131 aa10.1□□□□□ -0.79
CCDC40-201ENST00000269318 CIRBP-AS1Q8TBR5 109 aa10.1□□□□□ -0.79
CCDC40-201ENST00000269318 BPY2O14599 106 aa10.09□□□□□ -0.79
CCDC40-201ENST00000269318 KRTAP10-1P60331 282 aa10.08□□□□□ -0.8
CCDC40-201ENST00000269318 SACSQ9NZJ4 4579 aa10.08□□□□□ -0.8
CCDC40-201ENST00000269318 IGKV4-1P06312 121 aa10.06□□□□□ -0.8
CCDC40-201ENST00000269318 ZNF706Q9Y5V0 76 aaPredicted RBP10.06□□□□□ -0.8
CCDC40-201ENST00000269318 Q8N9L7 120 aa10.05□□□□□ -0.8
CCDC40-201ENST00000269318 IGLV7-43P04211 117 aa10.05□□□□□ -0.8
CCDC40-201ENST00000269318 COX7CP15954 63 aa10.04□□□□□ -0.8
CCDC40-201ENST00000269318 A0A087WSZ3 146 aa10.03□□□□□ -0.8
CCDC40-201ENST00000269318 UQCRQO14949 82 aa10.03□□□□□ -0.8
CCDC40-201ENST00000269318 SERP2Q8N6R1 65 aa10.03□□□□□ -0.8
CCDC40-201ENST00000269318 LCE6AA0A183 80 aa10.01□□□□□ -0.81
CCDC40-201ENST00000269318 IGLV9-49A0A0B4J1Y8 123 aa10□□□□□ -0.81
CCDC40-201ENST00000269318 DSCR10P59022 87 aa10□□□□□ -0.81
CCDC40-201ENST00000269318 RPL37AP61513 92 aaKnown RBP9.98□□□□□ -0.81
CCDC40-201ENST00000269318 C9orf153Q5TBE3 101 aa9.97□□□□□ -0.81
CCDC40-201ENST00000269318 ANAPC11Q9NYG5 84 aa9.97□□□□□ -0.81
CCDC40-201ENST00000269318 LRP1BQ9NZR2 4599 aa9.96□□□□□ -0.81
CCDC40-201ENST00000269318 K7EQZ3 153 aa9.94□□□□□ -0.82
CCDC40-201ENST00000269318 MOBPQ13875 183 aa9.93□□□□□ -0.82
CCDC40-201ENST00000269318 DEFB116Q30KQ4 102 aa9.93□□□□□ -0.82
CCDC40-201ENST00000269318 TRAV7A0A075B6U4 112 aa9.92□□□□□ -0.82
CCDC40-201ENST00000269318 LINC00336Q6ZUF6 198 aa9.92□□□□□ -0.82
CCDC40-201ENST00000269318 SMIM20Q8N5G0 67 aa9.92□□□□□ -0.82
CCDC40-201ENST00000269318 LINC00472Q9H8W2 130 aa9.92□□□□□ -0.82
CCDC40-201ENST00000269318 PKHD1P08F94 4074 aa9.89□□□□□ -0.83
CCDC40-201ENST00000269318 A0A1B0GVY2 172 aa9.86□□□□□ -0.83
CCDC40-201ENST00000269318 CYSTM1Q9H1C7 97 aa9.86□□□□□ -0.83
CCDC40-201ENST00000269318 HRCT1Q6UXD1 115 aa9.85□□□□□ -0.83
CCDC40-201ENST00000269318 RYR2Q92736 4967 aa9.85□□□□□ -0.83
CCDC40-201ENST00000269318 OCR1Q9BZK8 76 aa9.84□□□□□ -0.83
CCDC40-201ENST00000269318 Q96NJ1 140 aa9.84□□□□□ -0.83
CCDC40-201ENST00000269318 VPS13BQ7Z7G8 4022 aa9.83□□□□□ -0.84
CCDC40-201ENST00000269318 A8MWP4 228 aa9.83□□□□□ -0.84
CCDC40-201ENST00000269318 HCG22E2RYF7 251 aa9.82□□□□□ -0.84
CCDC40-201ENST00000269318 SS18L2Q9UHA2 77 aa9.81□□□□□ -0.84
CCDC40-201ENST00000269318 J3KT08 172 aa9.81□□□□□ -0.84
CCDC40-201ENST00000269318 PRR15Q8IV56 129 aa9.81□□□□□ -0.84
CCDC40-201ENST00000269318 C20orf197Q8N268 126 aa9.81□□□□□ -0.84
CCDC40-201ENST00000269318 DYNC1H1Q14204 4646 aaKnown RBP9.8□□□□□ -0.84
CCDC40-201ENST00000269318 SSBP3-AS1Q7Z2R9 100 aa9.79□□□□□ -0.84
CCDC40-201ENST00000269318 KMT2CQ8NEZ4 4911 aaKnown RBP9.78□□□□□ -0.84
CCDC40-201ENST00000269318 A0A087X002 238 aa9.78□□□□□ -0.84
CCDC40-201ENST00000269318 FAM229BQ4G0N7 80 aa9.77□□□□□ -0.84
CCDC40-201ENST00000269318 KRTAP1-4P0C5Y4 121 aa9.77□□□□□ -0.85
CCDC40-201ENST00000269318 CD164Q04900 197 aa9.77□□□□□ -0.85
CCDC40-201ENST00000269318 KRTAP13-2Q52LG2 175 aa9.77□□□□□ -0.85
CCDC40-201ENST00000269318 KRTAP29-1A8MX34 341 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-201ENST00000269318 KLKP1Q107X0 134 aa9.76□□□□□ -0.85
CCDC40-201ENST00000269318 WFDC13Q8IUB5 93 aa9.74□□□□□ -0.85
CCDC40-201ENST00000269318 SNURFQ9Y675 71 aa9.72□□□□□ -0.85
CCDC40-201ENST00000269318 NDUFB1O75438 58 aa9.71□□□□□ -0.86
CCDC40-201ENST00000269318 TMEM254Q8TBM7 123 aa9.71□□□□□ -0.86
CCDC40-201ENST00000269318 CASC2Q6XLA1 102 aa9.7□□□□□ -0.86
CCDC40-201ENST00000269318 MMP24-AS1A0A0U1RRL7 71 aa9.7□□□□□ -0.86
CCDC40-201ENST00000269318 APOBP04114 4563 aaKnown RBP9.7□□□□□ -0.86
CCDC40-201ENST00000269318 TMEM258P61165 79 aa9.69□□□□□ -0.86
CCDC40-201ENST00000269318 RYR3Q15413 4870 aa9.68□□□□□ -0.86
CCDC40-201ENST00000269318 H7BZZ5 65 aa9.68□□□□□ -0.86
CCDC40-201ENST00000269318 A0A0U1RQV1 116 aa9.67□□□□□ -0.86
CCDC40-201ENST00000269318 SPINK6Q6UWN8 80 aa9.67□□□□□ -0.86
CCDC40-201ENST00000269318 ASB16-AS1Q495Z4 193 aa9.66□□□□□ -0.86
CCDC40-201ENST00000269318 SMR3BP02814 79 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-201ENST00000269318 A0A1B0GVX0 72 aa9.65□□□□□ -0.86
CCDC40-201ENST00000269318 PLA2G1BP04054 148 aaKnown RBP9.64□□□□□ -0.87
CCDC40-201ENST00000269318 C8orf17Q9NRJ1 99 aa9.63□□□□□ -0.87
CCDC40-201ENST00000269318 hDV103S1A0JD37 113 aa9.63□□□□□ -0.87
CCDC40-201ENST00000269318 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
CCDC40-201ENST00000269318 Q5XG85 94 aa9.63□□□□□ -0.87
CCDC40-201ENST00000269318 CDK2AP2O75956 126 aa9.62□□□□□ -0.87
CCDC40-201ENST00000269318 IGHV6-1A0A0B4J1U7 121 aa9.61□□□□□ -0.87
CCDC40-201ENST00000269318 NDUFC1O43677 76 aa9.61□□□□□ -0.87
CCDC40-201ENST00000269318 C5orf47Q569G3 176 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms