RNA–Protein interactions for RNA: ENST00000265085.9

CPEB4-201, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPEB4, Length 9,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-201ENST00000265085 ITPR1Q14643 2758 aa5.03□□□□□ -1.6
CPEB4-201ENST00000265085 Q5W150 140 aa5.02□□□□□ -1.61
CPEB4-201ENST00000265085 FLNAP21333 2647 aaKnown RBP5.02□□□□□ -1.61
CPEB4-201ENST00000265085 BAHCC1Q9P281 2608 aa5.01□□□□□ -1.61
CPEB4-201ENST00000265085 NOTCH1P46531 2555 aa5.01□□□□□ -1.61
CPEB4-201ENST00000265085 PLAC8Q9NZF1 115 aa5.01□□□□□ -1.61
CPEB4-201ENST00000265085 GIG44P09565 113 aaPredicted RBP5□□□□□ -1.61
CPEB4-201ENST00000265085 PANO1I0J062 215 aa5□□□□□ -1.61
CPEB4-201ENST00000265085 KRTAP11-1Q8IUC1 163 aa4.99□□□□□ -1.61
CPEB4-201ENST00000265085 ATRQ13535 2644 aa4.99□□□□□ -1.61
CPEB4-201ENST00000265085 LINC00304Q8N9R0 145 aa4.99□□□□□ -1.61
CPEB4-201ENST00000265085 SPRR1AP35321 89 aa4.98□□□□□ -1.61
CPEB4-201ENST00000265085 KRTAP26-1Q6PEX3 210 aa4.98□□□□□ -1.61
CPEB4-201ENST00000265085 SRCAPQ6ZRS2 3230 aa4.97□□□□□ -1.61
CPEB4-201ENST00000265085 COX6B2Q6YFQ2 88 aa4.97□□□□□ -1.61
CPEB4-201ENST00000265085 MAP1AP78559 2803 aaPredicted RBP4.94□□□□□ -1.62
CPEB4-201ENST00000265085 ITPR3Q14573 2671 aa4.92□□□□□ -1.62
CPEB4-201ENST00000265085 ZFHX3Q15911 3703 aa4.92□□□□□ -1.62
CPEB4-201ENST00000265085 ITPR2Q14571 2701 aa4.91□□□□□ -1.62
CPEB4-201ENST00000265085 KRTAP4-16G5E9R7 235 aaPredicted RBP4.91□□□□□ -1.62
CPEB4-201ENST00000265085 SPRR1BP22528 89 aa4.91□□□□□ -1.62
CPEB4-201ENST00000265085 ANAPC11Q9NYG5 84 aa4.91□□□□□ -1.62
CPEB4-201ENST00000265085 COL6A5A8TX70 2615 aa4.89□□□□□ -1.63
CPEB4-201ENST00000265085 DNAH12Q6ZR08 3092 aa4.88□□□□□ -1.63
CPEB4-201ENST00000265085 CHD6Q8TD26 2715 aa4.88□□□□□ -1.63
CPEB4-201ENST00000265085 TEP1Q99973 2627 aaKnown RBP4.88□□□□□ -1.63
CPEB4-201ENST00000265085 LRBAP50851 2863 aa4.87□□□□□ -1.63
CPEB4-201ENST00000265085 PLAC4Q8WY50 150 aa4.87□□□□□ -1.63
CPEB4-201ENST00000265085 NBDYA0A0U1RRE5 68 aa4.85□□□□□ -1.63
CPEB4-201ENST00000265085 K7EIL1 84 aa4.85□□□□□ -1.63
CPEB4-201ENST00000265085 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.83□□□□□ -1.64
CPEB4-201ENST00000265085 A0A087WTM6 91 aa4.83□□□□□ -1.64
CPEB4-201ENST00000265085 TYMSOSQ8TAI1 123 aa4.82□□□□□ -1.64
CPEB4-201ENST00000265085 TEX15Q9BXT5 2789 aa4.82□□□□□ -1.64
CPEB4-201ENST00000265085 FLNCQ14315 2725 aa4.81□□□□□ -1.64
CPEB4-201ENST00000265085 MGAM2Q2M2H8 2515 aa4.8□□□□□ -1.64
CPEB4-201ENST00000265085 UTP20O75691 2785 aaKnown RBP4.8□□□□□ -1.64
CPEB4-201ENST00000265085 STAB2Q8WWQ8 2551 aa4.8□□□□□ -1.64
CPEB4-201ENST00000265085 DSPP15924 2871 aaKnown RBP4.79□□□□□ -1.64
CPEB4-201ENST00000265085 NBEAL2Q6ZNJ1 2754 aa4.79□□□□□ -1.64
CPEB4-201ENST00000265085 A0A1W2PPR1 153 aa4.79□□□□□ -1.64
CPEB4-201ENST00000265085 NBEAQ8NFP9 2946 aa4.77□□□□□ -1.65
CPEB4-201ENST00000265085 P0C880 135 aa4.77□□□□□ -1.65
CPEB4-201ENST00000265085 MGAQ8IWI9 3026 aa4.77□□□□□ -1.65
CPEB4-201ENST00000265085 SETXQ7Z333 2677 aaKnown RBP4.75□□□□□ -1.65
CPEB4-201ENST00000265085 J3QKU1 62 aa4.75□□□□□ -1.65
CPEB4-201ENST00000265085 H0YAA0 97 aa4.75□□□□□ -1.65
CPEB4-201ENST00000265085 UBR5O95071 2799 aaPredicted RBP4.75□□□□□ -1.65
CPEB4-201ENST00000265085 STAB1Q9NY15 2570 aa4.74□□□□□ -1.65
CPEB4-201ENST00000265085 GOLGB1Q14789 3259 aaKnown RBP4.74□□□□□ -1.65
CPEB4-201ENST00000265085 S4R3F8 94 aa4.73□□□□□ -1.65
CPEB4-201ENST00000265085 Q6ZSA8 131 aa4.73□□□□□ -1.65
CPEB4-201ENST00000265085 APCP25054 2843 aa4.73□□□□□ -1.65
CPEB4-201ENST00000265085 C9orf92A6NGG3 77 aa4.73□□□□□ -1.65
CPEB4-201ENST00000265085 IGSF10Q6WRI0 2623 aa4.71□□□□□ -1.65
CPEB4-201ENST00000265085 CFAP54Q96N23 3096 aa4.71□□□□□ -1.66
CPEB4-201ENST00000265085 PP632Q6XCG6 107 aa4.71□□□□□ -1.66
CPEB4-201ENST00000265085 FRYLO94915 3013 aa4.71□□□□□ -1.66
CPEB4-201ENST00000265085 NSD1Q96L73 2696 aaPredicted RBP4.7□□□□□ -1.66
CPEB4-201ENST00000265085 PCNTO95613 3336 aa4.7□□□□□ -1.66
CPEB4-201ENST00000265085 C10orf95Q9H7T3 257 aa4.69□□□□□ -1.66
CPEB4-201ENST00000265085 WWC2-AS2Q96NR7 200 aa4.67□□□□□ -1.66
CPEB4-201ENST00000265085 HIVEP1P15822 2718 aa4.67□□□□□ -1.66
CPEB4-201ENST00000265085 R4GN34 69 aa4.66□□□□□ -1.66
CPEB4-201ENST00000265085 TRIOO75962 3097 aa4.66□□□□□ -1.66
CPEB4-201ENST00000265085 SRRM2Q9UQ35 2752 aaKnown RBP4.65□□□□□ -1.66
CPEB4-201ENST00000265085 CEP350Q5VT06 3117 aa4.64□□□□□ -1.67
CPEB4-201ENST00000265085 M0QZ58 72 aa4.63□□□□□ -1.67
CPEB4-201ENST00000265085 UTRNP46939 3433 aa4.62□□□□□ -1.67
CPEB4-201ENST00000265085 LAMA2P24043 3122 aaKnown RBP4.61□□□□□ -1.67
CPEB4-201ENST00000265085 KRTAP24-1Q3LI83 254 aa4.59□□□□□ -1.67
CPEB4-201ENST00000265085 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
CPEB4-201ENST00000265085 C5orf42Q9H799 3197 aa4.58□□□□□ -1.68
CPEB4-201ENST00000265085 CHD7Q9P2D1 2997 aa4.57□□□□□ -1.68
CPEB4-201ENST00000265085 VPS13AQ96RL7 3174 aa4.56□□□□□ -1.68
CPEB4-201ENST00000265085 TACC2O95359 2948 aa4.55□□□□□ -1.68
CPEB4-201ENST00000265085 FRYQ5TBA9 3013 aa4.55□□□□□ -1.68
CPEB4-201ENST00000265085 CHD9Q3L8U1 2897 aa4.54□□□□□ -1.68
CPEB4-201ENST00000265085 TGP01266 2768 aa4.53□□□□□ -1.68
CPEB4-201ENST00000265085 KALRNO60229 2985 aa4.51□□□□□ -1.69
CPEB4-201ENST00000265085 ASH1LQ9NR48 2969 aaKnown RBP4.51□□□□□ -1.69
CPEB4-201ENST00000265085 NIPBLQ6KC79 2804 aaeCLIP4.51□□□□□ -1.69
CPEB4-201ENST00000265085 NF1P21359 2839 aa4.49□□□□□ -1.69
CPEB4-201ENST00000265085 FREM2Q5SZK8 3169 aa4.48□□□□□ -1.69
CPEB4-201ENST00000265085 TPRXLQ17RH7 258 aa4.48□□□□□ -1.69
CPEB4-201ENST00000265085 RANBP2P49792 3224 aaKnown RBP4.46□□□□□ -1.7
CPEB4-201ENST00000265085 PRO2289Q9P1D8 64 aa4.46□□□□□ -1.7
CPEB4-201ENST00000265085 INE1O15225 51 aa4.46□□□□□ -1.7
CPEB4-201ENST00000265085 ZZEF1O43149 2961 aa4.44□□□□□ -1.7
CPEB4-201ENST00000265085 KRTAP10-9P60411 292 aa4.43□□□□□ -1.7
CPEB4-201ENST00000265085 KRTAP7-1Q8IUC3 87 aa4.42□□□□□ -1.7
CPEB4-201ENST00000265085 CELSR2Q9HCU4 2923 aa4.41□□□□□ -1.7
CPEB4-201ENST00000265085 KRTAP13-1Q8IUC0 172 aa4.4□□□□□ -1.7
CPEB4-201ENST00000265085 PRUNE2Q8WUY3 3088 aa4.4□□□□□ -1.7
CPEB4-201ENST00000265085 KRTAP13-3Q3SY46 172 aa4.39□□□□□ -1.71
CPEB4-201ENST00000265085 ZANQ9Y493 2812 aa4.39□□□□□ -1.71
CPEB4-201ENST00000265085 SMR3AQ99954 134 aa4.38□□□□□ -1.71
CPEB4-201ENST00000265085 KRTAP23-1A1A580 65 aa4.38□□□□□ -1.71
CPEB4-201ENST00000265085 KRTAP10-11P60412 298 aa4.37□□□□□ -1.71
CPEB4-201ENST00000265085 USP34Q70CQ2 3546 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms