RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 RPL37P61927 97 aaKnown RBP10.75□□□□□ -0.69
COL5A3-201ENST00000264828 H1FX-AS1Q4G0G2 97 aa10.73□□□□□ -0.69
COL5A3-201ENST00000264828 PRRC2CQ9Y520 2896 aaKnown RBP10.72□□□□□ -0.69
COL5A3-201ENST00000264828 SPATA8Q6RVD6 105 aa10.7□□□□□ -0.7
COL5A3-201ENST00000264828 M0QZ58 72 aa10.7□□□□□ -0.7
COL5A3-201ENST00000264828 MGAM2Q2M2H8 2515 aa10.69□□□□□ -0.7
COL5A3-201ENST00000264828 CHD7Q9P2D1 2997 aa10.67□□□□□ -0.7
COL5A3-201ENST00000264828 Q5VSD8 79 aa10.65□□□□□ -0.7
COL5A3-201ENST00000264828 HECTD1Q9ULT8 2610 aa10.64□□□□□ -0.71
COL5A3-201ENST00000264828 KRTAP10-1P60331 282 aa10.64□□□□□ -0.71
COL5A3-201ENST00000264828 KRTAP10-2P60368 255 aa10.62□□□□□ -0.71
COL5A3-201ENST00000264828 ADM2Q7Z4H4 148 aa10.61□□□□□ -0.71
COL5A3-201ENST00000264828 SEC61BP60468 96 aaKnown RBP10.61□□□□□ -0.71
COL5A3-201ENST00000264828 Q6ZR54 194 aa10.6□□□□□ -0.71
COL5A3-201ENST00000264828 CEP350Q5VT06 3117 aa10.59□□□□□ -0.71
COL5A3-201ENST00000264828 PANO1I0J062 215 aa10.56□□□□□ -0.72
COL5A3-201ENST00000264828 LCE6AA0A183 80 aa10.54□□□□□ -0.72
COL5A3-201ENST00000264828 HTTP42858 3142 aa10.54□□□□□ -0.72
COL5A3-201ENST00000264828 EPG5Q9HCE0 2579 aa10.54□□□□□ -0.72
COL5A3-201ENST00000264828 FLNAP21333 2647 aaKnown RBP10.52□□□□□ -0.73
COL5A3-201ENST00000264828 KRTAP29-1A8MX34 341 aaPredicted RBP10.51□□□□□ -0.73
COL5A3-201ENST00000264828 CHD9Q3L8U1 2897 aa10.51□□□□□ -0.73
COL5A3-201ENST00000264828 KRTAP4-16G5E9R7 235 aaPredicted RBP10.5□□□□□ -0.73
COL5A3-201ENST00000264828 A0A087X002 238 aa10.48□□□□□ -0.73
COL5A3-201ENST00000264828 NOTCH2NLQ7Z3S9 236 aa10.48□□□□□ -0.73
COL5A3-201ENST00000264828 PLAC4Q8WY50 150 aa10.44□□□□□ -0.74
COL5A3-201ENST00000264828 ITPR3Q14573 2671 aa10.43□□□□□ -0.74
COL5A3-201ENST00000264828 PCNTO95613 3336 aa10.41□□□□□ -0.74
COL5A3-201ENST00000264828 A8MU10 97 aa10.39□□□□□ -0.75
COL5A3-201ENST00000264828 FLNBO75369 2602 aaKnown RBP10.38□□□□□ -0.75
COL5A3-201ENST00000264828 ATRQ13535 2644 aa10.38□□□□□ -0.75
COL5A3-201ENST00000264828 ASB16-AS1Q495Z4 193 aa10.38□□□□□ -0.75
COL5A3-201ENST00000264828 MKI67P46013 3256 aaKnown RBP10.36□□□□□ -0.75
COL5A3-201ENST00000264828 KRTAP11-1Q8IUC1 163 aa10.33□□□□□ -0.76
COL5A3-201ENST00000264828 KRTAP25-1Q3LHN0 102 aa10.32□□□□□ -0.76
COL5A3-201ENST00000264828 A6NN06 94 aa10.31□□□□□ -0.76
COL5A3-201ENST00000264828 KRTAP16-1A8MUX0 517 aa10.29□□□□□ -0.76
COL5A3-201ENST00000264828 MAST4O15021 2626 aa10.26□□□□□ -0.77
COL5A3-201ENST00000264828 TRANK1O15050 2925 aa10.25□□□□□ -0.77
COL5A3-201ENST00000264828 CFAP54Q96N23 3096 aa10.24□□□□□ -0.77
COL5A3-201ENST00000264828 C20orf166-AS1Q96NR2 134 aa10.23□□□□□ -0.77
COL5A3-201ENST00000264828 A8MUU9 505 aa10.2□□□□□ -0.78
COL5A3-201ENST00000264828 BRCA2P51587 3418 aa10.19□□□□□ -0.78
COL5A3-201ENST00000264828 FLG2Q5D862 2391 aaPredicted RBP10.18□□□□□ -0.78
COL5A3-201ENST00000264828 KRTAP7-1Q8IUC3 87 aa10.16□□□□□ -0.78
COL5A3-201ENST00000264828 NDUFAF8A1L188 74 aa10.14□□□□□ -0.79
COL5A3-201ENST00000264828 CHD6Q8TD26 2715 aa10.13□□□□□ -0.79
COL5A3-201ENST00000264828 HELZ2Q9BYK8 2649 aaKnown RBP10.13□□□□□ -0.79
COL5A3-201ENST00000264828 AKAP13Q12802 2813 aa10.12□□□□□ -0.79
COL5A3-201ENST00000264828 LAMA3Q16787 3333 aa10.12□□□□□ -0.79
COL5A3-201ENST00000264828 Q6ZRN7 208 aaPredicted RBP10.11□□□□□ -0.79
COL5A3-201ENST00000264828 NBEAL1Q6ZS30 2694 aa10.11□□□□□ -0.79
COL5A3-201ENST00000264828 CFAP46Q8IYW2 2715 aa10.11□□□□□ -0.79
COL5A3-201ENST00000264828 A0A0C4DFX4 3053 aa10.09□□□□□ -0.79
COL5A3-201ENST00000264828 KRTAP13-2Q52LG2 175 aa10.07□□□□□ -0.8
COL5A3-201ENST00000264828 DMBT1Q9UGM3 2413 aaPredicted RBP10.06□□□□□ -0.8
COL5A3-201ENST00000264828 RANBP2P49792 3224 aaKnown RBP10.06□□□□□ -0.8
COL5A3-201ENST00000264828 RPS29P62273 56 aaKnown RBP10.03□□□□□ -0.8
COL5A3-201ENST00000264828 CDH23Q9H251 3354 aa10.01□□□□□ -0.81
COL5A3-201ENST00000264828 STAB1Q9NY15 2570 aa10□□□□□ -0.81
COL5A3-201ENST00000264828 GCN1Q92616 2671 aaKnown RBP9.99□□□□□ -0.81
COL5A3-201ENST00000264828 MGAQ8IWI9 3026 aa9.97□□□□□ -0.81
COL5A3-201ENST00000264828 TEX15Q9BXT5 2789 aa9.97□□□□□ -0.81
COL5A3-201ENST00000264828 KRTAP13-1Q8IUC0 172 aa9.96□□□□□ -0.81
COL5A3-201ENST00000264828 C10orf95Q9H7T3 257 aa9.96□□□□□ -0.82
COL5A3-201ENST00000264828 CENPEQ02224 2701 aa9.93□□□□□ -0.82
COL5A3-201ENST00000264828 UNC79Q9P2D8 2635 aa9.93□□□□□ -0.82
COL5A3-201ENST00000264828 TRIOO75962 3097 aa9.87□□□□□ -0.83
COL5A3-201ENST00000264828 TNP1P09430 55 aa9.87□□□□□ -0.83
COL5A3-201ENST00000264828 NBEAL2Q6ZNJ1 2754 aa9.86□□□□□ -0.83
COL5A3-201ENST00000264828 UNC80Q8N2C7 3258 aa9.85□□□□□ -0.83
COL5A3-201ENST00000264828 LAMA2P24043 3122 aaKnown RBP9.83□□□□□ -0.84
COL5A3-201ENST00000264828 XIRP2A4UGR9 3374 aa9.82□□□□□ -0.84
COL5A3-201ENST00000264828 PRUNE2Q8WUY3 3088 aa9.81□□□□□ -0.84
COL5A3-201ENST00000264828 ZNF292O60281 2723 aa9.81□□□□□ -0.84
COL5A3-201ENST00000264828 KRTAP21-3Q3LHN1 58 aa9.8□□□□□ -0.84
COL5A3-201ENST00000264828 DNAH14Q0VDD8 3507 aa9.79□□□□□ -0.84
COL5A3-201ENST00000264828 TEP1Q99973 2627 aaKnown RBP9.77□□□□□ -0.85
COL5A3-201ENST00000264828 SZT2Q5T011 3432 aa9.76□□□□□ -0.85
COL5A3-201ENST00000264828 FREM2Q5SZK8 3169 aa9.76□□□□□ -0.85
COL5A3-201ENST00000264828 NOTCH1P46531 2555 aa9.75□□□□□ -0.85
COL5A3-201ENST00000264828 WDFY4Q6ZS81 3184 aa9.75□□□□□ -0.85
COL5A3-201ENST00000264828 SPTBN5Q9NRC6 3674 aaKnown RBP9.74□□□□□ -0.85
COL5A3-201ENST00000264828 STAB2Q8WWQ8 2551 aa9.71□□□□□ -0.85
COL5A3-201ENST00000264828 COL6A5A8TX70 2615 aa9.67□□□□□ -0.86
COL5A3-201ENST00000264828 FRYQ5TBA9 3013 aa9.67□□□□□ -0.86
COL5A3-201ENST00000264828 CELSR3Q9NYQ7 3312 aa9.65□□□□□ -0.86
COL5A3-201ENST00000264828 IGSF10Q6WRI0 2623 aa9.63□□□□□ -0.87
COL5A3-201ENST00000264828 A0A1B0GVY2 172 aa9.63□□□□□ -0.87
COL5A3-201ENST00000264828 SETXQ7Z333 2677 aaKnown RBP9.62□□□□□ -0.87
COL5A3-201ENST00000264828 KRTAP10-8P60410 259 aa9.61□□□□□ -0.87
COL5A3-201ENST00000264828 COL6A3P12111 3177 aa9.6□□□□□ -0.87
COL5A3-201ENST00000264828 H0YAA0 97 aa9.58□□□□□ -0.88
COL5A3-201ENST00000264828 XP32Q5T750 250 aa9.53□□□□□ -0.88
COL5A3-201ENST00000264828 KALRNO60229 2985 aa9.52□□□□□ -0.89
COL5A3-201ENST00000264828 PP632Q6XCG6 107 aa9.51□□□□□ -0.89
COL5A3-201ENST00000264828 DSPP15924 2871 aaKnown RBP9.51□□□□□ -0.89
COL5A3-201ENST00000264828 VPS13AQ96RL7 3174 aa9.5□□□□□ -0.89
COL5A3-201ENST00000264828 VCANP13611 3396 aa9.5□□□□□ -0.89
COL5A3-201ENST00000264828 BAHCC1Q9P281 2608 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms