RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 C14orf144Q96I85 54 aa8.74□□□□□ -1.01
USE1-201ENST00000263897 IGLV8-61A0A075B6I0 122 aa8.73□□□□□ -1.01
USE1-201ENST00000263897 TCL1BO95988 128 aa8.73□□□□□ -1.01
USE1-201ENST00000263897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.73□□□□□ -1.01
USE1-201ENST00000263897 OCIAD2Q56VL3 154 aa8.72□□□□□ -1.01
USE1-201ENST00000263897 Q6JHZ5 121 aa8.72□□□□□ -1.01
USE1-201ENST00000263897 CFC1BP0CG36 223 aa8.71□□□□□ -1.02
USE1-201ENST00000263897 CFC1P0CG37 223 aa8.71□□□□□ -1.02
USE1-201ENST00000263897 PCOTHQ58A44 107 aa8.71□□□□□ -1.02
USE1-201ENST00000263897 HIGD1BQ9P298 99 aa8.71□□□□□ -1.02
USE1-201ENST00000263897 SPATA45Q537H7 98 aa8.7□□□□□ -1.02
USE1-201ENST00000263897 KRTAP9-2Q9BYQ4 174 aa8.7□□□□□ -1.02
USE1-201ENST00000263897 PAM16Q9Y3D7 125 aa8.7□□□□□ -1.02
USE1-201ENST00000263897 IGFL1Q6UW32 110 aa8.69□□□□□ -1.02
USE1-201ENST00000263897 PPDPFLQ8WWR9 84 aa8.69□□□□□ -1.02
USE1-201ENST00000263897 CLEC2BQ92478 149 aa8.68□□□□□ -1.02
USE1-201ENST00000263897 RAB37Q96AX2 223 aa8.68□□□□□ -1.02
USE1-201ENST00000263897 SNHG12Q9BXW3 62 aa8.68□□□□□ -1.02
USE1-201ENST00000263897 VAMP8Q9BV40 100 aa8.67□□□□□ -1.02
USE1-201ENST00000263897 TRBV7-7A0A0K0K1E9 115 aa8.66□□□□□ -1.02
USE1-201ENST00000263897 C2orf91Q6ZV80 131 aa8.66□□□□□ -1.02
USE1-201ENST00000263897 A0A0B4J2C4 111 aa8.65□□□□□ -1.02
USE1-201ENST00000263897 H0YGX0 51 aa8.65□□□□□ -1.02
USE1-201ENST00000263897 SNCGO76070 127 aa8.63□□□□□ -1.03
USE1-201ENST00000263897 LCE2CQ5TA81 110 aa8.63□□□□□ -1.03
USE1-201ENST00000263897 CEND1Q8N111 149 aa8.62□□□□□ -1.03
USE1-201ENST00000263897 H3BUT2 72 aa8.61□□□□□ -1.03
USE1-201ENST00000263897 RPL37P61927 97 aaKnown RBP8.61□□□□□ -1.03
USE1-201ENST00000263897 KRTAP19-2Q3LHN2 52 aa8.61□□□□□ -1.03
USE1-201ENST00000263897 FAM218AQ96MZ4 157 aa8.61□□□□□ -1.03
USE1-201ENST00000263897 PRO1854Q9UHT4 67 aa8.6□□□□□ -1.03
USE1-201ENST00000263897 TMEM238LA0A1B0GVL6 79 aa8.58□□□□□ -1.04
USE1-201ENST00000263897 A6NJY4 79 aa8.58□□□□□ -1.04
USE1-201ENST00000263897 NDUFV3P56181 108 aaKnown RBP8.57□□□□□ -1.04
USE1-201ENST00000263897 A0A1B0GX51 115 aa8.56□□□□□ -1.04
USE1-201ENST00000263897 FXYD2P54710 66 aa8.56□□□□□ -1.04
USE1-201ENST00000263897 LST1O00453 97 aa8.55□□□□□ -1.04
USE1-201ENST00000263897 Q6Q795 121 aa8.55□□□□□ -1.04
USE1-201ENST00000263897 GHRHP01286 108 aa8.54□□□□□ -1.04
USE1-201ENST00000263897 PYY3Q5JQD4 70 aa8.53□□□□□ -1.04
USE1-201ENST00000263897 TEN1Q86WV5 123 aa8.53□□□□□ -1.04
USE1-201ENST00000263897 H3BMG7 143 aa8.51□□□□□ -1.05
USE1-201ENST00000263897 TRIAP1O43715 76 aa8.51□□□□□ -1.05
USE1-201ENST00000263897 FABP2P12104 132 aa8.51□□□□□ -1.05
USE1-201ENST00000263897 OBSCN-AS1Q96MR7 158 aa8.51□□□□□ -1.05
USE1-201ENST00000263897 KRTAP3-3Q9BYR6 98 aa8.51□□□□□ -1.05
USE1-201ENST00000263897 KRTAP3-2Q9BYR7 98 aa8.51□□□□□ -1.05
USE1-201ENST00000263897 SS18L2Q9UHA2 77 aa8.51□□□□□ -1.05
USE1-201ENST00000263897 MT1HP80294 61 aa8.5□□□□□ -1.05
USE1-201ENST00000263897 HSD52Q0P140 79 aa8.49□□□□□ -1.05
USE1-201ENST00000263897 Q75L30 129 aa8.47□□□□□ -1.05
USE1-201ENST00000263897 A0A087WSZ3 146 aa8.46□□□□□ -1.06
USE1-201ENST00000263897 PSMB2P49721 201 aa8.45□□□□□ -1.06
USE1-201ENST00000263897 ATP11AUNQ6ZP68 121 aa8.45□□□□□ -1.06
USE1-201ENST00000263897 A0A1W2PNM2 257 aa8.44□□□□□ -1.06
USE1-201ENST00000263897 K7ERJ3 54 aa8.44□□□□□ -1.06
USE1-201ENST00000263897 Q96NJ1 140 aa8.44□□□□□ -1.06
USE1-201ENST00000263897 H3BQ85 93 aa8.43□□□□□ -1.06
USE1-201ENST00000263897 DNAL4O96015 105 aa8.43□□□□□ -1.06
USE1-201ENST00000263897 COX6CP09669 75 aa8.43□□□□□ -1.06
USE1-201ENST00000263897 ORMDL1Q9P0S3 153 aa8.43□□□□□ -1.06
USE1-201ENST00000263897 UQCR10Q9UDW1 63 aa8.43□□□□□ -1.06
USE1-201ENST00000263897 ANKRD29Q8N6D5 301 aa8.41□□□□□ -1.06
USE1-201ENST00000263897 TMA7Q9Y2S6 64 aaKnown RBP8.41□□□□□ -1.06
USE1-201ENST00000263897 KRTAP9-6A0A140TA67 174 aa8.4□□□□□ -1.06
USE1-201ENST00000263897 TMEM256-PLSCR3K7ERE1 68 aa8.4□□□□□ -1.06
USE1-201ENST00000263897 COX6B2Q6YFQ2 88 aa8.4□□□□□ -1.06
USE1-201ENST00000263897 TRBV7-4A0A0J9YYF1 115 aa8.38□□□□□ -1.07
USE1-201ENST00000263897 C20orf166-AS1Q96NR2 134 aa8.38□□□□□ -1.07
USE1-201ENST00000263897 A8MUU9 505 aa8.37□□□□□ -1.07
USE1-201ENST00000263897 A0A1B0GV72 72 aa8.35□□□□□ -1.07
USE1-201ENST00000263897 M0R2T5 61 aa8.35□□□□□ -1.07
USE1-201ENST00000263897 LORP23490 312 aaPredicted RBP8.35□□□□□ -1.07
USE1-201ENST00000263897 KRTAP10-6P60371 365 aaPredicted RBP8.35□□□□□ -1.07
USE1-201ENST00000263897 TRACP01848 142 aa8.34□□□□□ -1.07
USE1-201ENST00000263897 UBE2V1Q13404 147 aa8.34□□□□□ -1.07
USE1-201ENST00000263897 SCGB1C2P0DMR2 95 aa8.33□□□□□ -1.08
USE1-201ENST00000263897 DSCR10P59022 87 aa8.33□□□□□ -1.08
USE1-201ENST00000263897 SIGMAR1Q99720 223 aa8.33□□□□□ -1.08
USE1-201ENST00000263897 CCKP06307 115 aa8.32□□□□□ -1.08
USE1-201ENST00000263897 IGKV4-1P06312 121 aa8.32□□□□□ -1.08
USE1-201ENST00000263897 LINC00313P59037 77 aa8.31□□□□□ -1.08
USE1-201ENST00000263897 LINC00472Q9H8W2 130 aa8.3□□□□□ -1.08
USE1-201ENST00000263897 DEFB116Q30KQ4 102 aa8.28□□□□□ -1.08
USE1-201ENST00000263897 RBM3P98179 157 aaKnown RBP8.27□□□□□ -1.09
USE1-201ENST00000263897 FLGP20930 4061 aaPredicted RBP8.26□□□□□ -1.09
USE1-201ENST00000263897 KRTAP16-1A8MUX0 517 aa8.26□□□□□ -1.09
USE1-201ENST00000263897 BAALC-AS2P0C853 105 aa8.25□□□□□ -1.09
USE1-201ENST00000263897 NOTCH2NLQ7Z3S9 236 aa8.25□□□□□ -1.09
USE1-201ENST00000263897 DSCR8Q96T75 97 aa8.24□□□□□ -1.09
USE1-201ENST00000263897 VPS25Q9BRG1 176 aa8.23□□□□□ -1.09
USE1-201ENST00000263897 CRCT1Q9UGL9 99 aa8.23□□□□□ -1.09
USE1-201ENST00000263897 TRBV20-1A0A075B6N2 111 aa8.21□□□□□ -1.1
USE1-201ENST00000263897 IGHV6-1A0A0B4J1U7 121 aa8.21□□□□□ -1.1
USE1-201ENST00000263897 C9JAW5 83 aa8.2□□□□□ -1.1
USE1-201ENST00000263897 M0R143 59 aa8.2□□□□□ -1.1
USE1-201ENST00000263897 C21orf62-AS1Q17RA5 79 aa8.18□□□□□ -1.1
USE1-201ENST00000263897 NAA38Q9BRA0 125 aaKnown RBP8.17□□□□□ -1.1
USE1-201ENST00000263897 FSIP2Q5CZC0 6907 aa8.16□□□□□ -1.1
USE1-201ENST00000263897 A0A1B0GVX0 72 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms