RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 REG3GQ6UW15 175 aa11.17□□□□□ -0.62
SDF4-201ENST00000263741 CCKP06307 115 aa11.15□□□□□ -0.62
SDF4-201ENST00000263741 PRLHP81277 87 aa11.15□□□□□ -0.62
SDF4-201ENST00000263741 ATOX1O00244 68 aa11.15□□□□□ -0.63
SDF4-201ENST00000263741 SPINK6Q6UWN8 80 aa11.14□□□□□ -0.63
SDF4-201ENST00000263741 UQCRQO14949 82 aa11.13□□□□□ -0.63
SDF4-201ENST00000263741 LINC00846Q9NV44 126 aa11.13□□□□□ -0.63
SDF4-201ENST00000263741 FAT3Q8TDW7 4589 aa11.13□□□□□ -0.63
SDF4-201ENST00000263741 C6orf99Q4VX62 202 aa11.13□□□□□ -0.63
SDF4-201ENST00000263741 FAM19A1Q7Z5A9 133 aa11.13□□□□□ -0.63
SDF4-201ENST00000263741 C3orf22Q8N5N4 141 aa11.13□□□□□ -0.63
SDF4-201ENST00000263741 IGLV6-57P01721 117 aa11.12□□□□□ -0.63
SDF4-201ENST00000263741 UBE2AP49459 152 aa11.12□□□□□ -0.63
SDF4-201ENST00000263741 SMIM20Q8N5G0 67 aa11.12□□□□□ -0.63
SDF4-201ENST00000263741 PRYO14603 147 aa11.12□□□□□ -0.63
SDF4-201ENST00000263741 ATP5EP2Q5VTU8 51 aa11.12□□□□□ -0.63
SDF4-201ENST00000263741 H3BQ85 93 aa11.11□□□□□ -0.63
SDF4-201ENST00000263741 ZNF861PO60384 105 aa11.11□□□□□ -0.63
SDF4-201ENST00000263741 HIST1H4AP62805 103 aaKnown RBP11.11□□□□□ -0.63
SDF4-201ENST00000263741 C9orf153Q5TBE3 101 aa11.11□□□□□ -0.63
SDF4-201ENST00000263741 KCNQ1DNQ9H478 68 aa11.11□□□□□ -0.63
SDF4-201ENST00000263741 KRTAP13-1Q8IUC0 172 aa11.1□□□□□ -0.63
SDF4-201ENST00000263741 LINC00575Q6W349 94 aa11.1□□□□□ -0.63
SDF4-201ENST00000263741 H0Y9J4 135 aa11.09□□□□□ -0.63
SDF4-201ENST00000263741 IGKV3D-7A0A0C4DH55 119 aa11.08□□□□□ -0.63
SDF4-201ENST00000263741 SEC61GP60059 68 aa11.08□□□□□ -0.63
SDF4-201ENST00000263741 DIRC1Q969H9 104 aa11.08□□□□□ -0.63
SDF4-201ENST00000263741 DMBT1Q9UGM3 2413 aaPredicted RBP11.08□□□□□ -0.64
SDF4-201ENST00000263741 TRAV23DV6A0A075B6W5 121 aa11.08□□□□□ -0.64
SDF4-201ENST00000263741 hADV29S1A0JD25 119 aa11.08□□□□□ -0.64
SDF4-201ENST00000263741 SPRR1AP35321 89 aa11.07□□□□□ -0.64
SDF4-201ENST00000263741 KRTAP4-16G5E9R7 235 aaPredicted RBP11.07□□□□□ -0.64
SDF4-201ENST00000263741 COX7CP15954 63 aa11.07□□□□□ -0.64
SDF4-201ENST00000263741 ETDCA0A1B0GVM5 59 aa11.05□□□□□ -0.64
SDF4-201ENST00000263741 HIGD2AQ9BW72 106 aa11.05□□□□□ -0.64
SDF4-201ENST00000263741 GHRHP01286 108 aa11.04□□□□□ -0.64
SDF4-201ENST00000263741 UBL5Q9BZL1 73 aa11.04□□□□□ -0.64
SDF4-201ENST00000263741 ZNF73O43830 326 aaPredicted RBP11.03□□□□□ -0.64
SDF4-201ENST00000263741 RBM3P98179 157 aaKnown RBP11.02□□□□□ -0.64
SDF4-201ENST00000263741 KRTAP29-1A8MX34 341 aaPredicted RBP11.02□□□□□ -0.65
SDF4-201ENST00000263741 LAMTOR3Q9UHA4 124 aa11.02□□□□□ -0.65
SDF4-201ENST00000263741 LOC110117498A0A087WWA1 95 aa11□□□□□ -0.65
SDF4-201ENST00000263741 KRTAP1-4P0C5Y4 121 aa11□□□□□ -0.65
SDF4-201ENST00000263741 PDE6GP18545 87 aa11□□□□□ -0.65
SDF4-201ENST00000263741 J3QL48 77 aa11□□□□□ -0.65
SDF4-201ENST00000263741 OXTP01178 125 aa10.99□□□□□ -0.65
SDF4-201ENST00000263741 CRYGAP11844 174 aa10.99□□□□□ -0.65
SDF4-201ENST00000263741 SERP2Q8N6R1 65 aa10.99□□□□□ -0.65
SDF4-201ENST00000263741 Q6ZRX8 168 aa10.98□□□□□ -0.65
SDF4-201ENST00000263741 Q9BRP9 147 aa10.98□□□□□ -0.65
SDF4-201ENST00000263741 ANAPC11Q9NYG5 84 aa10.98□□□□□ -0.65
SDF4-201ENST00000263741 TRBV7-6A0A0J9YX20 115 aa10.97□□□□□ -0.65
SDF4-201ENST00000263741 MT1HL1P0DM35 61 aa10.97□□□□□ -0.65
SDF4-201ENST00000263741 Q6ZQT0 140 aa10.97□□□□□ -0.65
SDF4-201ENST00000263741 DSCR8Q96T75 97 aa10.97□□□□□ -0.65
SDF4-201ENST00000263741 Q6ZQY7 126 aa10.97□□□□□ -0.65
SDF4-201ENST00000263741 A0A087WVE0 104 aa10.96□□□□□ -0.65
SDF4-201ENST00000263741 COX7BP24311 80 aa10.96□□□□□ -0.65
SDF4-201ENST00000263741 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.96□□□□□ -0.65
SDF4-201ENST00000263741 TNXBP22105 4242 aa10.96□□□□□ -0.66
SDF4-201ENST00000263741 ERC2-IT1O76042 136 aa10.96□□□□□ -0.66
SDF4-201ENST00000263741 PRR26Q8N8Z3 221 aa10.96□□□□□ -0.66
SDF4-201ENST00000263741 ELOF1P60002 83 aaKnown RBP10.93□□□□□ -0.66
SDF4-201ENST00000263741 A0A087X002 238 aa10.92□□□□□ -0.66
SDF4-201ENST00000263741 SPRR4Q96PI1 79 aa10.89□□□□□ -0.67
SDF4-201ENST00000263741 HERC1Q15751 4861 aa10.89□□□□□ -0.67
SDF4-201ENST00000263741 KRTAP10-8P60410 259 aa10.88□□□□□ -0.67
SDF4-201ENST00000263741 ST20-AS1Q8NBB2 130 aa10.88□□□□□ -0.67
SDF4-201ENST00000263741 TMEM258P61165 79 aa10.86□□□□□ -0.67
SDF4-201ENST00000263741 Q6ZVQ6 151 aa10.85□□□□□ -0.67
SDF4-201ENST00000263741 TRBV7-4A0A0J9YYF1 115 aa10.84□□□□□ -0.67
SDF4-201ENST00000263741 J3KT08 172 aa10.84□□□□□ -0.67
SDF4-201ENST00000263741 LINC01547P58512 204 aaPredicted RBP10.84□□□□□ -0.67
SDF4-201ENST00000263741 CXCL6P80162 114 aa10.84□□□□□ -0.67
SDF4-201ENST00000263741 KRTAP13-2Q52LG2 175 aa10.84□□□□□ -0.67
SDF4-201ENST00000263741 ZNF706Q9Y5V0 76 aaPredicted RBP10.84□□□□□ -0.67
SDF4-201ENST00000263741 DHRS4-AS1Q9P1J3 65 aa10.83□□□□□ -0.68
SDF4-201ENST00000263741 FAM229BQ4G0N7 80 aa10.81□□□□□ -0.68
SDF4-201ENST00000263741 LINC00483Q53H64 154 aa10.78□□□□□ -0.68
SDF4-201ENST00000263741 TYMSOSQ8TAI1 123 aa10.78□□□□□ -0.68
SDF4-201ENST00000263741 RPS28P62857 69 aaKnown RBP10.77□□□□□ -0.69
SDF4-201ENST00000263741 DEFB105AQ8NG35 78 aa10.77□□□□□ -0.69
SDF4-201ENST00000263741 TRAV7A0A075B6U4 112 aa10.76□□□□□ -0.69
SDF4-201ENST00000263741 IGLV9-49A0A0B4J1Y8 123 aa10.75□□□□□ -0.69
SDF4-201ENST00000263741 CYSTM1Q9H1C7 97 aa10.74□□□□□ -0.69
SDF4-201ENST00000263741 MOBPQ13875 183 aa10.72□□□□□ -0.69
SDF4-201ENST00000263741 C4orf48Q5BLP8 95 aa10.71□□□□□ -0.69
SDF4-201ENST00000263741 V9GYY9 64 aa10.71□□□□□ -0.69
SDF4-201ENST00000263741 C20orf197Q8N268 126 aa10.7□□□□□ -0.7
SDF4-201ENST00000263741 SPRR1BP22528 89 aa10.69□□□□□ -0.7
SDF4-201ENST00000263741 IGLV5-48A0A075B6I7 105 aa10.67□□□□□ -0.7
SDF4-201ENST00000263741 LINC00304Q8N9R0 145 aa10.67□□□□□ -0.7
SDF4-201ENST00000263741 Q8NBF4 154 aa10.67□□□□□ -0.7
SDF4-201ENST00000263741 Q8N377 158 aa10.66□□□□□ -0.7
SDF4-201ENST00000263741 NREPQ16612 68 aa10.65□□□□□ -0.7
SDF4-201ENST00000263741 A0A1B0GW54 56 aa10.65□□□□□ -0.7
SDF4-201ENST00000263741 SMIM29Q86T20 159 aa10.64□□□□□ -0.71
SDF4-201ENST00000263741 FAM236DA0A1B0GTK5 79 aa10.62□□□□□ -0.71
SDF4-201ENST00000263741 FAM236CP0DP71 79 aa10.62□□□□□ -0.71
SDF4-201ENST00000263741 KLKP1Q107X0 134 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms