RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 FLNCQ14315 2725 aa8.48□□□□□ -1.05
TMEM260-201ENST00000261556 LINC00476Q8WZB0 136 aa8.48□□□□□ -1.05
TMEM260-201ENST00000261556 H3BNG1 76 aa8.48□□□□□ -1.05
TMEM260-201ENST00000261556 H3BPC8 53 aa8.47□□□□□ -1.05
TMEM260-201ENST00000261556 IGHV6-1A0A0B4J1U7 121 aa8.47□□□□□ -1.05
TMEM260-201ENST00000261556 SPANXA2-OT1Q8N9U9 137 aa8.47□□□□□ -1.05
TMEM260-201ENST00000261556 KCNQ1DNQ9H478 68 aa8.43□□□□□ -1.06
TMEM260-201ENST00000261556 SPINK1P00995 79 aa8.42□□□□□ -1.06
TMEM260-201ENST00000261556 NBDYA0A0U1RRE5 68 aa8.42□□□□□ -1.06
TMEM260-201ENST00000261556 MIR22HGQ0VDD5 57 aa8.41□□□□□ -1.06
TMEM260-201ENST00000261556 CSNK1G2-AS1Q8NCQ2 148 aa8.41□□□□□ -1.06
TMEM260-201ENST00000261556 ZCCHC13Q8WW36 166 aaKnown RBP8.4□□□□□ -1.06
TMEM260-201ENST00000261556 FLG2Q5D862 2391 aaPredicted RBP8.4□□□□□ -1.06
TMEM260-201ENST00000261556 K7EIL1 84 aa8.4□□□□□ -1.06
TMEM260-201ENST00000261556 LINC01558Q9Y6Z2 57 aa8.4□□□□□ -1.06
TMEM260-201ENST00000261556 A0A1B0GW54 56 aa8.39□□□□□ -1.07
TMEM260-201ENST00000261556 KRTAP1-3Q8IUG1 177 aa8.39□□□□□ -1.07
TMEM260-201ENST00000261556 KRTAP10-3P60369 221 aa8.39□□□□□ -1.07
TMEM260-201ENST00000261556 COL12A1Q99715 3063 aa8.38□□□□□ -1.07
TMEM260-201ENST00000261556 Q6ZRX8 168 aa8.38□□□□□ -1.07
TMEM260-201ENST00000261556 C19orf73Q9NVV2 129 aa8.38□□□□□ -1.07
TMEM260-201ENST00000261556 KRTAP10-11P60412 298 aa8.37□□□□□ -1.07
TMEM260-201ENST00000261556 CHTF8P0CG12 524 aa8.37□□□□□ -1.07
TMEM260-201ENST00000261556 GIG44P09565 113 aaPredicted RBP8.37□□□□□ -1.07
TMEM260-201ENST00000261556 UQCR11O14957 56 aa8.36□□□□□ -1.07
TMEM260-201ENST00000261556 WWC2-AS2Q96NR7 200 aa8.36□□□□□ -1.07
TMEM260-201ENST00000261556 SPINT4Q6UDR6 99 aa8.35□□□□□ -1.07
TMEM260-201ENST00000261556 ACYP2P14621 99 aa8.34□□□□□ -1.07
TMEM260-201ENST00000261556 KRTAP1-1Q07627 177 aa8.34□□□□□ -1.07
TMEM260-201ENST00000261556 STAB2Q8WWQ8 2551 aa8.34□□□□□ -1.07
TMEM260-201ENST00000261556 A8MWP4 228 aa8.34□□□□□ -1.07
TMEM260-201ENST00000261556 DNAH10OSP0CZ25 163 aa8.34□□□□□ -1.07
TMEM260-201ENST00000261556 IGLV5-48A0A075B6I7 105 aa8.33□□□□□ -1.08
TMEM260-201ENST00000261556 IGFL1Q6UW32 110 aa8.33□□□□□ -1.08
TMEM260-201ENST00000261556 SPENQ96T58 3664 aaKnown RBP8.33□□□□□ -1.08
TMEM260-201ENST00000261556 IGLV7-46A0A075B6I9 117 aa8.33□□□□□ -1.08
TMEM260-201ENST00000261556 RTL8CO15255 209 aa8.33□□□□□ -1.08
TMEM260-201ENST00000261556 C9orf163Q8N9P6 203 aa8.32□□□□□ -1.08
TMEM260-201ENST00000261556 FAM168BA1KXE4 195 aa8.31□□□□□ -1.08
TMEM260-201ENST00000261556 SSBP3-AS1Q7Z2R9 100 aa8.31□□□□□ -1.08
TMEM260-201ENST00000261556 CUBNO60494 3623 aa8.31□□□□□ -1.08
TMEM260-201ENST00000261556 SPACA4Q8TDM5 124 aa8.31□□□□□ -1.08
TMEM260-201ENST00000261556 DMBT1Q9UGM3 2413 aaPredicted RBP8.3□□□□□ -1.08
TMEM260-201ENST00000261556 K7ERS5 55 aa8.3□□□□□ -1.08
TMEM260-201ENST00000261556 GVQW2A0A096LPI5 108 aaPredicted RBP8.3□□□□□ -1.08
TMEM260-201ENST00000261556 ITPR2Q14571 2701 aa8.29□□□□□ -1.08
TMEM260-201ENST00000261556 TP53AIP1Q9HCN2 124 aa8.28□□□□□ -1.08
TMEM260-201ENST00000261556 RELNP78509 3460 aa8.28□□□□□ -1.08
TMEM260-201ENST00000261556 HRES1P13985 223 aa8.28□□□□□ -1.08
TMEM260-201ENST00000261556 SMG1Q96Q15 3661 aaKnown RBP8.27□□□□□ -1.09
TMEM260-201ENST00000261556 CRIPTQ9P021 101 aa8.26□□□□□ -1.09
TMEM260-201ENST00000261556 IGLV1-50A0A075B6I6 118 aa8.25□□□□□ -1.09
TMEM260-201ENST00000261556 PRR34Q9NV39 138 aa8.23□□□□□ -1.09
TMEM260-201ENST00000261556 FAM229AH3BQW9 127 aa8.23□□□□□ -1.09
TMEM260-201ENST00000261556 PLA2G1BP04054 148 aaKnown RBP8.22□□□□□ -1.09
TMEM260-201ENST00000261556 SPRR4Q96PI1 79 aa8.22□□□□□ -1.09
TMEM260-201ENST00000261556 LCE6AA0A183 80 aa8.22□□□□□ -1.09
TMEM260-201ENST00000261556 IGKV2D-30A0A075B6S6 120 aa8.21□□□□□ -1.09
TMEM260-201ENST00000261556 IGKV2-30P06310 120 aa8.21□□□□□ -1.09
TMEM260-201ENST00000261556 CNBPP62633 177 aaKnown RBP8.2□□□□□ -1.1
TMEM260-201ENST00000261556 APCP25054 2843 aa8.2□□□□□ -1.1
TMEM260-201ENST00000261556 HIVEP1P15822 2718 aa8.19□□□□□ -1.1
TMEM260-201ENST00000261556 TYMSOSQ8TAI1 123 aa8.18□□□□□ -1.1
TMEM260-201ENST00000261556 C15orf56Q8N910 161 aa8.17□□□□□ -1.1
TMEM260-201ENST00000261556 SVEP1Q4LDE5 3571 aa8.16□□□□□ -1.1
TMEM260-201ENST00000261556 Q6ZR54 194 aa8.15□□□□□ -1.1
TMEM260-201ENST00000261556 TENM4Q6N022 2769 aa8.14□□□□□ -1.11
TMEM260-201ENST00000261556 UTP20O75691 2785 aaKnown RBP8.14□□□□□ -1.11
TMEM260-201ENST00000261556 C8orf17Q9NRJ1 99 aa8.14□□□□□ -1.11
TMEM260-201ENST00000261556 A0A0A0MQY5 61 aa8.13□□□□□ -1.11
TMEM260-201ENST00000261556 A0A087WTM6 91 aa8.13□□□□□ -1.11
TMEM260-201ENST00000261556 CASC10Q5T4H9 136 aa8.12□□□□□ -1.11
TMEM260-201ENST00000261556 MRPL34Q9BQ48 92 aaKnown RBP8.12□□□□□ -1.11
TMEM260-201ENST00000261556 KMT2BQ9UMN6 2715 aaPredicted RBP8.12□□□□□ -1.11
TMEM260-201ENST00000261556 ZFHX3Q15911 3703 aa8.11□□□□□ -1.11
TMEM260-201ENST00000261556 SMR3BP02814 79 aaPredicted RBP8.1□□□□□ -1.11
TMEM260-201ENST00000261556 CELSR2Q9HCU4 2923 aa8.1□□□□□ -1.11
TMEM260-201ENST00000261556 APLNQ9ULZ1 77 aa8.07□□□□□ -1.12
TMEM260-201ENST00000261556 MMP24-AS1A0A0U1RRL7 71 aa8.06□□□□□ -1.12
TMEM260-201ENST00000261556 KRTAP29-1A8MX34 341 aaPredicted RBP8.05□□□□□ -1.12
TMEM260-201ENST00000261556 IGLV5-37A0A075B6J1 123 aa8.04□□□□□ -1.12
TMEM260-201ENST00000261556 ZNF861PO60384 105 aa8.04□□□□□ -1.12
TMEM260-201ENST00000261556 ANAPC11Q9NYG5 84 aa8.04□□□□□ -1.12
TMEM260-201ENST00000261556 ROMO1P60602 79 aa8.04□□□□□ -1.12
TMEM260-201ENST00000261556 NF1P21359 2839 aa8.03□□□□□ -1.12
TMEM260-201ENST00000261556 CRYBG3Q68DQ2 2970 aa8.02□□□□□ -1.13
TMEM260-201ENST00000261556 ZANQ9Y493 2812 aa8.02□□□□□ -1.13
TMEM260-201ENST00000261556 TNP2Q05952 138 aa8.02□□□□□ -1.13
TMEM260-201ENST00000261556 NIPBLQ6KC79 2804 aaeCLIP8.01□□□□□ -1.13
TMEM260-201ENST00000261556 Q96NJ1 140 aa8.01□□□□□ -1.13
TMEM260-201ENST00000261556 BSNQ9UPA5 3926 aa8.01□□□□□ -1.13
TMEM260-201ENST00000261556 TLX1NBP0CAT3 122 aa8□□□□□ -1.13
TMEM260-201ENST00000261556 J3QL48 77 aa8□□□□□ -1.13
TMEM260-201ENST00000261556 A0A1B0GVX0 72 aa8□□□□□ -1.13
TMEM260-201ENST00000261556 PSORS1C2Q9UIG4 136 aa7.99□□□□□ -1.13
TMEM260-201ENST00000261556 DCHS2Q6V1P9 2916 aa7.98□□□□□ -1.13
TMEM260-201ENST00000261556 CELSR1Q9NYQ6 3014 aa7.97□□□□□ -1.13
TMEM260-201ENST00000261556 ASB16-AS1Q495Z4 193 aa7.97□□□□□ -1.13
TMEM260-201ENST00000261556 SPATA8Q6RVD6 105 aa7.97□□□□□ -1.13
TMEM260-201ENST00000261556 FBN2P35556 2912 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms