RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 INAFM2P0DMQ5 153 aa9.55□□□□□ -0.88
CCDC90B-201ENST00000260054 FAM218AQ96MZ4 157 aa9.55□□□□□ -0.88
CCDC90B-201ENST00000260054 DHRS4-AS1Q9P1J3 65 aa9.55□□□□□ -0.88
CCDC90B-201ENST00000260054 CLEC2BQ92478 149 aa9.54□□□□□ -0.88
CCDC90B-201ENST00000260054 TRBV7-7A0A0K0K1E9 115 aa9.52□□□□□ -0.89
CCDC90B-201ENST00000260054 ABCA13Q86UQ4 5058 aa9.52□□□□□ -0.89
CCDC90B-201ENST00000260054 PKHD1L1Q86WI1 4243 aa9.51□□□□□ -0.89
CCDC90B-201ENST00000260054 hADV29S1A0JD25 119 aa9.51□□□□□ -0.89
CCDC90B-201ENST00000260054 ST20-AS1Q8NBB2 130 aa9.5□□□□□ -0.89
CCDC90B-201ENST00000260054 IMUPQ9GZP8 106 aa9.5□□□□□ -0.89
CCDC90B-201ENST00000260054 SS18L2Q9UHA2 77 aa9.5□□□□□ -0.89
CCDC90B-201ENST00000260054 TRACP01848 142 aa9.49□□□□□ -0.89
CCDC90B-201ENST00000260054 CCDC179H3BU77 68 aa9.48□□□□□ -0.89
CCDC90B-201ENST00000260054 SPRR4Q96PI1 79 aa9.48□□□□□ -0.89
CCDC90B-201ENST00000260054 KRTAP1-4P0C5Y4 121 aa9.47□□□□□ -0.89
CCDC90B-201ENST00000260054 Q6ZQY7 126 aa9.46□□□□□ -0.89
CCDC90B-201ENST00000260054 FLG2Q5D862 2391 aaPredicted RBP9.46□□□□□ -0.9
CCDC90B-201ENST00000260054 A0A1B0GX51 115 aa9.45□□□□□ -0.9
CCDC90B-201ENST00000260054 ANAPC11Q9NYG5 84 aa9.45□□□□□ -0.9
CCDC90B-201ENST00000260054 ZNF706Q9Y5V0 76 aaPredicted RBP9.45□□□□□ -0.9
CCDC90B-201ENST00000260054 GAGE2AQ6NT46 116 aa9.45□□□□□ -0.9
CCDC90B-201ENST00000260054 LINC01547P58512 204 aaPredicted RBP9.44□□□□□ -0.9
CCDC90B-201ENST00000260054 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.44□□□□□ -0.9
CCDC90B-201ENST00000260054 LINC00643Q86TS7 51 aa9.43□□□□□ -0.9
CCDC90B-201ENST00000260054 DEFB105AQ8NG35 78 aa9.43□□□□□ -0.9
CCDC90B-201ENST00000260054 IGLV5-48A0A075B6I7 105 aa9.42□□□□□ -0.9
CCDC90B-201ENST00000260054 MYCBP2O75592 4640 aa9.42□□□□□ -0.9
CCDC90B-201ENST00000260054 LINC00483Q53H64 154 aa9.42□□□□□ -0.9
CCDC90B-201ENST00000260054 LRP1Q07954 4544 aaKnown RBP9.41□□□□□ -0.9
CCDC90B-201ENST00000260054 DNAL4O96015 105 aa9.4□□□□□ -0.9
CCDC90B-201ENST00000260054 SPRR1BP22528 89 aa9.4□□□□□ -0.9
CCDC90B-201ENST00000260054 Q8N377 158 aa9.4□□□□□ -0.9
CCDC90B-201ENST00000260054 A0A087X002 238 aa9.39□□□□□ -0.91
CCDC90B-201ENST00000260054 BAALC-AS2P0C853 105 aa9.39□□□□□ -0.91
CCDC90B-201ENST00000260054 PCLOQ9Y6V0 5065 aa9.38□□□□□ -0.91
CCDC90B-201ENST00000260054 FAT3Q8TDW7 4589 aa9.37□□□□□ -0.91
CCDC90B-201ENST00000260054 FAM229BQ4G0N7 80 aa9.37□□□□□ -0.91
CCDC90B-201ENST00000260054 C3orf22Q8N5N4 141 aa9.36□□□□□ -0.91
CCDC90B-201ENST00000260054 PRR26Q8N8Z3 221 aa9.36□□□□□ -0.91
CCDC90B-201ENST00000260054 FAM236AA0A1B0GUQ0 79 aa9.36□□□□□ -0.91
CCDC90B-201ENST00000260054 FAM236BA0A1B0GV22 79 aa9.36□□□□□ -0.91
CCDC90B-201ENST00000260054 SMIM29Q86T20 159 aa9.36□□□□□ -0.91
CCDC90B-201ENST00000260054 ORMDL1Q9P0S3 153 aa9.36□□□□□ -0.91
CCDC90B-201ENST00000260054 CRYGAP11844 174 aa9.35□□□□□ -0.91
CCDC90B-201ENST00000260054 KRTAP13-2Q52LG2 175 aa9.35□□□□□ -0.91
CCDC90B-201ENST00000260054 IGLV9-49A0A0B4J1Y8 123 aa9.32□□□□□ -0.92
CCDC90B-201ENST00000260054 LAMTOR3Q9UHA4 124 aa9.32□□□□□ -0.92
CCDC90B-201ENST00000260054 UQCRQO14949 82 aa9.31□□□□□ -0.92
CCDC90B-201ENST00000260054 GHRHP01286 108 aa9.31□□□□□ -0.92
CCDC90B-201ENST00000260054 OXTP01178 125 aa9.3□□□□□ -0.92
CCDC90B-201ENST00000260054 TMEM256-PLSCR3K7ERE1 68 aa9.29□□□□□ -0.92
CCDC90B-201ENST00000260054 MOBPQ13875 183 aa9.29□□□□□ -0.92
CCDC90B-201ENST00000260054 SMIM20Q8N5G0 67 aa9.29□□□□□ -0.92
CCDC90B-201ENST00000260054 KRTAP29-1A8MX34 341 aaPredicted RBP9.29□□□□□ -0.92
CCDC90B-201ENST00000260054 H3BQ85 93 aa9.29□□□□□ -0.92
CCDC90B-201ENST00000260054 KRTAP10-8P60410 259 aa9.29□□□□□ -0.92
CCDC90B-201ENST00000260054 OBSCN-AS1Q96MR7 158 aa9.29□□□□□ -0.92
CCDC90B-201ENST00000260054 MT1HL1P0DM35 61 aa9.28□□□□□ -0.92
CCDC90B-201ENST00000260054 HIST1H4AP62805 103 aaKnown RBP9.28□□□□□ -0.92
CCDC90B-201ENST00000260054 C9orf153Q5TBE3 101 aa9.28□□□□□ -0.92
CCDC90B-201ENST00000260054 TYMSOSQ8TAI1 123 aa9.28□□□□□ -0.92
CCDC90B-201ENST00000260054 ATOX1O00244 68 aa9.26□□□□□ -0.93
CCDC90B-201ENST00000260054 Q6JHZ5 121 aa9.26□□□□□ -0.93
CCDC90B-201ENST00000260054 TNXBP22105 4242 aa9.26□□□□□ -0.93
CCDC90B-201ENST00000260054 COX7CP15954 63 aa9.26□□□□□ -0.93
CCDC90B-201ENST00000260054 Q8NBF4 154 aa9.26□□□□□ -0.93
CCDC90B-201ENST00000260054 F8WEM9 126 aa9.25□□□□□ -0.93
CCDC90B-201ENST00000260054 IGLV8-61A0A075B6I0 122 aa9.23□□□□□ -0.93
CCDC90B-201ENST00000260054 SSBP3-AS1Q7Z2R9 100 aa9.23□□□□□ -0.93
CCDC90B-201ENST00000260054 A0A0G2JQZ4 141 aa9.22□□□□□ -0.93
CCDC90B-201ENST00000260054 C14orf132Q9NPU4 83 aa9.2□□□□□ -0.94
CCDC90B-201ENST00000260054 IGFL1Q6UW32 110 aa9.19□□□□□ -0.94
CCDC90B-201ENST00000260054 J3QL48 77 aa9.18□□□□□ -0.94
CCDC90B-201ENST00000260054 JMJD7-PLA2G4BH0Y9G9 81 aa9.17□□□□□ -0.94
CCDC90B-201ENST00000260054 LINC00304Q8N9R0 145 aa9.17□□□□□ -0.94
CCDC90B-201ENST00000260054 KRTAP3-3Q9BYR6 98 aa9.17□□□□□ -0.94
CCDC90B-201ENST00000260054 KRTAP3-2Q9BYR7 98 aa9.17□□□□□ -0.94
CCDC90B-201ENST00000260054 CCKP06307 115 aa9.16□□□□□ -0.94
CCDC90B-201ENST00000260054 LINC00846Q9NV44 126 aa9.16□□□□□ -0.94
CCDC90B-201ENST00000260054 ATP5EP2Q5VTU8 51 aa9.16□□□□□ -0.94
CCDC90B-201ENST00000260054 DMBT1Q9UGM3 2413 aaPredicted RBP9.15□□□□□ -0.94
CCDC90B-201ENST00000260054 RBM3P98179 157 aaKnown RBP9.15□□□□□ -0.94
CCDC90B-201ENST00000260054 SERP2Q8N6R1 65 aa9.14□□□□□ -0.95
CCDC90B-201ENST00000260054 J3KT08 172 aa9.13□□□□□ -0.95
CCDC90B-201ENST00000260054 RPS28P62857 69 aaKnown RBP9.13□□□□□ -0.95
CCDC90B-201ENST00000260054 HRCT1Q6UXD1 115 aa9.13□□□□□ -0.95
CCDC90B-201ENST00000260054 IGKV3D-7A0A0C4DH55 119 aa9.13□□□□□ -0.95
CCDC90B-201ENST00000260054 TRBV7-4A0A0J9YYF1 115 aa9.13□□□□□ -0.95
CCDC90B-201ENST00000260054 C4orf48Q5BLP8 95 aa9.12□□□□□ -0.95
CCDC90B-201ENST00000260054 SPAG11AQ6PDA7 123 aa9.11□□□□□ -0.95
CCDC90B-201ENST00000260054 DSCR8Q96T75 97 aa9.11□□□□□ -0.95
CCDC90B-201ENST00000260054 TMEM258P61165 79 aa9.1□□□□□ -0.95
CCDC90B-201ENST00000260054 CD164Q04900 197 aa9.1□□□□□ -0.95
CCDC90B-201ENST00000260054 A0A1W2PNM2 257 aa9.09□□□□□ -0.95
CCDC90B-201ENST00000260054 SPINK1P00995 79 aa9.09□□□□□ -0.95
CCDC90B-201ENST00000260054 LOC110117498A0A087WWA1 95 aa9.07□□□□□ -0.96
CCDC90B-201ENST00000260054 Q6ZQT0 140 aa9.07□□□□□ -0.96
CCDC90B-201ENST00000260054 A0A087WVE0 104 aa9.05□□□□□ -0.96
CCDC90B-201ENST00000260054 RPS29P62273 56 aaKnown RBP9.05□□□□□ -0.96
CCDC90B-201ENST00000260054 UBL5Q9BZL1 73 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms