RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 FLG2Q5D862 2391 aaPredicted RBP4□□□□□ -1.77
PDGFRA-201ENST00000257290 RANBP2P49792 3224 aaKnown RBP3.99□□□□□ -1.77
PDGFRA-201ENST00000257290 SPRR1AP35321 89 aa3.99□□□□□ -1.77
PDGFRA-201ENST00000257290 A0A087WTM6 91 aa3.98□□□□□ -1.77
PDGFRA-201ENST00000257290 MKI67P46013 3256 aaKnown RBP3.97□□□□□ -1.77
PDGFRA-201ENST00000257290 ZNF292O60281 2723 aa3.97□□□□□ -1.77
PDGFRA-201ENST00000257290 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.96□□□□□ -1.78
PDGFRA-201ENST00000257290 ANAPC11Q9NYG5 84 aa3.95□□□□□ -1.78
PDGFRA-201ENST00000257290 LAMA3Q16787 3333 aa3.95□□□□□ -1.78
PDGFRA-201ENST00000257290 SPRR1BP22528 89 aa3.95□□□□□ -1.78
PDGFRA-201ENST00000257290 TNRC18O15417 2968 aaPredicted RBP3.94□□□□□ -1.78
PDGFRA-201ENST00000257290 LRRK2Q5S007 2527 aa3.94□□□□□ -1.78
PDGFRA-201ENST00000257290 USP9XQ93008 2570 aaPredicted RBP3.93□□□□□ -1.78
PDGFRA-201ENST00000257290 TYMSOSQ8TAI1 123 aa3.92□□□□□ -1.78
PDGFRA-201ENST00000257290 ABCA2Q9BZC7 2435 aa3.92□□□□□ -1.78
PDGFRA-201ENST00000257290 ABCA12Q86UK0 2595 aa3.92□□□□□ -1.78
PDGFRA-201ENST00000257290 POLQO75417 2590 aa3.91□□□□□ -1.78
PDGFRA-201ENST00000257290 F8P00451 2351 aa3.91□□□□□ -1.78
PDGFRA-201ENST00000257290 AKAP13Q12802 2813 aa3.91□□□□□ -1.78
PDGFRA-201ENST00000257290 USP9YO00507 2555 aaPredicted RBP3.91□□□□□ -1.78
PDGFRA-201ENST00000257290 CDH23Q9H251 3354 aa3.9□□□□□ -1.78
PDGFRA-201ENST00000257290 ZFYVE26Q68DK2 2539 aa3.9□□□□□ -1.79
PDGFRA-201ENST00000257290 KRTAP21-3Q3LHN1 58 aa3.9□□□□□ -1.79
PDGFRA-201ENST00000257290 FASNP49327 2511 aaKnown RBP3.89□□□□□ -1.79
PDGFRA-201ENST00000257290 EPG5Q9HCE0 2579 aa3.88□□□□□ -1.79
PDGFRA-201ENST00000257290 MYO9AB2RTY4 2548 aa3.88□□□□□ -1.79
PDGFRA-201ENST00000257290 SPTBN5Q9NRC6 3674 aaKnown RBP3.87□□□□□ -1.79
PDGFRA-201ENST00000257290 C10orf95Q9H7T3 257 aa3.87□□□□□ -1.79
PDGFRA-201ENST00000257290 Q6ZSA8 131 aa3.87□□□□□ -1.79
PDGFRA-201ENST00000257290 FN1P02751 2386 aaKnown RBP3.87□□□□□ -1.79
PDGFRA-201ENST00000257290 USP24Q9UPU5 2620 aa3.86□□□□□ -1.79
PDGFRA-201ENST00000257290 R4GN34 69 aa3.86□□□□□ -1.79
PDGFRA-201ENST00000257290 SZT2Q5T011 3432 aa3.85□□□□□ -1.79
PDGFRA-201ENST00000257290 H0YAA0 97 aa3.85□□□□□ -1.79
PDGFRA-201ENST00000257290 TLN2Q9Y4G6 2542 aa3.85□□□□□ -1.79
PDGFRA-201ENST00000257290 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
PDGFRA-201ENST00000257290 XIRP2A4UGR9 3374 aa3.83□□□□□ -1.8
PDGFRA-201ENST00000257290 DNAH14Q0VDD8 3507 aa3.83□□□□□ -1.8
PDGFRA-201ENST00000257290 UNC80Q8N2C7 3258 aa3.82□□□□□ -1.8
PDGFRA-201ENST00000257290 ACANP16112 2415 aa3.82□□□□□ -1.8
PDGFRA-201ENST00000257290 JMJD1CQ15652 2540 aa3.82□□□□□ -1.8
PDGFRA-201ENST00000257290 KRTAP15-1Q3LI76 137 aa3.81□□□□□ -1.8
PDGFRA-201ENST00000257290 MTORP42345 2549 aa3.81□□□□□ -1.8
PDGFRA-201ENST00000257290 FLNAP21333 2647 aaKnown RBP3.8□□□□□ -1.8
PDGFRA-201ENST00000257290 HECTD1Q9ULT8 2610 aa3.8□□□□□ -1.8
PDGFRA-201ENST00000257290 IGSF10Q6WRI0 2623 aa3.79□□□□□ -1.8
PDGFRA-201ENST00000257290 MGAQ8IWI9 3026 aa3.78□□□□□ -1.8
PDGFRA-201ENST00000257290 KRTAP1-5Q9BYS1 174 aa3.78□□□□□ -1.81
PDGFRA-201ENST00000257290 PRUNE2Q8WUY3 3088 aa3.77□□□□□ -1.81
PDGFRA-201ENST00000257290 S4R3F8 94 aa3.77□□□□□ -1.81
PDGFRA-201ENST00000257290 PRRC2CQ9Y520 2896 aaKnown RBP3.77□□□□□ -1.81
PDGFRA-201ENST00000257290 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
PDGFRA-201ENST00000257290 ITPR3Q14573 2671 aa3.77□□□□□ -1.81
PDGFRA-201ENST00000257290 USP34Q70CQ2 3546 aa3.76□□□□□ -1.81
PDGFRA-201ENST00000257290 DMBT1Q9UGM3 2413 aaPredicted RBP3.76□□□□□ -1.81
PDGFRA-201ENST00000257290 PRO2289Q9P1D8 64 aa3.75□□□□□ -1.81
PDGFRA-201ENST00000257290 M0R2T5 61 aa3.75□□□□□ -1.81
PDGFRA-201ENST00000257290 LAMA2P24043 3122 aaKnown RBP3.75□□□□□ -1.81
PDGFRA-201ENST00000257290 REV3LO60673 3130 aa3.75□□□□□ -1.81
PDGFRA-201ENST00000257290 HELZ2Q9BYK8 2649 aaKnown RBP3.74□□□□□ -1.81
PDGFRA-201ENST00000257290 C9orf92A6NGG3 77 aa3.74□□□□□ -1.81
PDGFRA-201ENST00000257290 SMR3BP02814 79 aaPredicted RBP3.73□□□□□ -1.81
PDGFRA-201ENST00000257290 TRIOO75962 3097 aa3.72□□□□□ -1.81
PDGFRA-201ENST00000257290 TPRXLQ17RH7 258 aa3.72□□□□□ -1.81
PDGFRA-201ENST00000257290 SETD2Q9BYW2 2564 aaPredicted RBP3.72□□□□□ -1.81
PDGFRA-201ENST00000257290 M0QZ58 72 aa3.69□□□□□ -1.82
PDGFRA-201ENST00000257290 UNC79Q9P2D8 2635 aa3.69□□□□□ -1.82
PDGFRA-201ENST00000257290 EYSQ5T1H1 3165 aa3.69□□□□□ -1.82
PDGFRA-201ENST00000257290 INE1O15225 51 aa3.69□□□□□ -1.82
PDGFRA-201ENST00000257290 LAMA1P25391 3075 aa3.68□□□□□ -1.82
PDGFRA-201ENST00000257290 CFAP46Q8IYW2 2715 aa3.68□□□□□ -1.82
PDGFRA-201ENST00000257290 Q6ZRN7 208 aaPredicted RBP3.67□□□□□ -1.82
PDGFRA-201ENST00000257290 DSPP15924 2871 aaKnown RBP3.67□□□□□ -1.82
PDGFRA-201ENST00000257290 WDFY4Q6ZS81 3184 aa3.67□□□□□ -1.82
PDGFRA-201ENST00000257290 KRTAP10-1P60331 282 aa3.66□□□□□ -1.82
PDGFRA-201ENST00000257290 KRTAP10-2P60368 255 aa3.66□□□□□ -1.82
PDGFRA-201ENST00000257290 VCANP13611 3396 aa3.65□□□□□ -1.82
PDGFRA-201ENST00000257290 UBR5O95071 2799 aaPredicted RBP3.65□□□□□ -1.82
PDGFRA-201ENST00000257290 MYO15AQ9UKN7 3530 aa3.64□□□□□ -1.83
PDGFRA-201ENST00000257290 CELSR3Q9NYQ7 3312 aa3.64□□□□□ -1.83
PDGFRA-201ENST00000257290 COL6A3P12111 3177 aa3.64□□□□□ -1.83
PDGFRA-201ENST00000257290 KRTAP10-8P60410 259 aa3.61□□□□□ -1.83
PDGFRA-201ENST00000257290 ATRQ13535 2644 aa3.61□□□□□ -1.83
PDGFRA-201ENST00000257290 A0A0C4DFX4 3053 aa3.61□□□□□ -1.83
PDGFRA-201ENST00000257290 FLNBO75369 2602 aaKnown RBP3.61□□□□□ -1.83
PDGFRA-201ENST00000257290 KRTAP7-1Q8IUC3 87 aa3.6□□□□□ -1.83
PDGFRA-201ENST00000257290 VPS13AQ96RL7 3174 aa3.6□□□□□ -1.83
PDGFRA-201ENST00000257290 Q5VSD8 79 aa3.59□□□□□ -1.84
PDGFRA-201ENST00000257290 CFAP54Q96N23 3096 aa3.58□□□□□ -1.84
PDGFRA-201ENST00000257290 FRYQ5TBA9 3013 aa3.58□□□□□ -1.84
PDGFRA-201ENST00000257290 SPEGQ15772 3267 aa3.58□□□□□ -1.84
PDGFRA-201ENST00000257290 KRTAP13-1Q8IUC0 172 aa3.57□□□□□ -1.84
PDGFRA-201ENST00000257290 HRNRQ86YZ3 2850 aaPredicted RBP3.57□□□□□ -1.84
PDGFRA-201ENST00000257290 TEX15Q9BXT5 2789 aa3.57□□□□□ -1.84
PDGFRA-201ENST00000257290 DMXL2Q8TDJ6 3036 aa3.57□□□□□ -1.84
PDGFRA-201ENST00000257290 DMXL1Q9Y485 3027 aa3.57□□□□□ -1.84
PDGFRA-201ENST00000257290 KMT2BQ9UMN6 2715 aaPredicted RBP3.56□□□□□ -1.84
PDGFRA-201ENST00000257290 RPS29P62273 56 aaKnown RBP3.55□□□□□ -1.84
PDGFRA-201ENST00000257290 UTP20O75691 2785 aaKnown RBP3.55□□□□□ -1.84
PDGFRA-201ENST00000257290 KRTAP13-3Q3SY46 172 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms