RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 LYRM7Q5U5X0 104 aa8.27□□□□□ -1.09
VPS25-201ENST00000253794 TYMSOSQ8TAI1 123 aa8.27□□□□□ -1.09
VPS25-201ENST00000253794 GHRHP01286 108 aa8.26□□□□□ -1.09
VPS25-201ENST00000253794 DEFB105AQ8NG35 78 aa8.26□□□□□ -1.09
VPS25-201ENST00000253794 LAMTOR3Q9UHA4 124 aa8.26□□□□□ -1.09
VPS25-201ENST00000253794 H3BUT2 72 aa8.25□□□□□ -1.09
VPS25-201ENST00000253794 SSBP3-AS1Q7Z2R9 100 aa8.25□□□□□ -1.09
VPS25-201ENST00000253794 NAA38Q9BRA0 125 aaKnown RBP8.25□□□□□ -1.09
VPS25-201ENST00000253794 H3BQ85 93 aa8.24□□□□□ -1.09
VPS25-201ENST00000253794 Q8NBF4 154 aa8.24□□□□□ -1.09
VPS25-201ENST00000253794 HERC1Q15751 4861 aa8.24□□□□□ -1.09
VPS25-201ENST00000253794 TRBV20-1A0A075B6N2 111 aa8.23□□□□□ -1.09
VPS25-201ENST00000253794 A0A1W2PPM0 123 aa8.23□□□□□ -1.09
VPS25-201ENST00000253794 TCL1BO95988 128 aa8.23□□□□□ -1.09
VPS25-201ENST00000253794 DNAL4O96015 105 aa8.23□□□□□ -1.09
VPS25-201ENST00000253794 IGLV8-61A0A075B6I0 122 aa8.22□□□□□ -1.09
VPS25-201ENST00000253794 IGLV9-49A0A0B4J1Y8 123 aa8.22□□□□□ -1.09
VPS25-201ENST00000253794 MOBPQ13875 183 aa8.22□□□□□ -1.09
VPS25-201ENST00000253794 ATXN8Q156A1 80 aa8.22□□□□□ -1.09
VPS25-201ENST00000253794 ORMDL1Q9P0S3 153 aa8.21□□□□□ -1.1
VPS25-201ENST00000253794 LINC00304Q8N9R0 145 aa8.2□□□□□ -1.1
VPS25-201ENST00000253794 FABP2P12104 132 aa8.19□□□□□ -1.1
VPS25-201ENST00000253794 C9orf153Q5TBE3 101 aa8.19□□□□□ -1.1
VPS25-201ENST00000253794 SPAG11AQ6PDA7 123 aa8.19□□□□□ -1.1
VPS25-201ENST00000253794 TMEM256-PLSCR3K7ERE1 68 aa8.18□□□□□ -1.1
VPS25-201ENST00000253794 F8WEM9 126 aa8.17□□□□□ -1.1
VPS25-201ENST00000253794 NDUFV3P56181 108 aaKnown RBP8.16□□□□□ -1.1
VPS25-201ENST00000253794 RPS29P62273 56 aaKnown RBP8.16□□□□□ -1.1
VPS25-201ENST00000253794 UBE2V1Q13404 147 aa8.16□□□□□ -1.1
VPS25-201ENST00000253794 Q6JHZ5 121 aa8.16□□□□□ -1.1
VPS25-201ENST00000253794 SPINK1P00995 79 aa8.15□□□□□ -1.1
VPS25-201ENST00000253794 CD164Q04900 197 aa8.15□□□□□ -1.1
VPS25-201ENST00000253794 C4orf48Q5BLP8 95 aa8.13□□□□□ -1.11
VPS25-201ENST00000253794 BAALC-AS2P0C853 105 aa8.12□□□□□ -1.11
VPS25-201ENST00000253794 SPCS1Q9Y6A9 102 aa8.12□□□□□ -1.11
VPS25-201ENST00000253794 H3BMG7 143 aa8.11□□□□□ -1.11
VPS25-201ENST00000253794 IGFL1Q6UW32 110 aa8.11□□□□□ -1.11
VPS25-201ENST00000253794 C9JAW5 83 aa8.09□□□□□ -1.11
VPS25-201ENST00000253794 ANKRD29Q8N6D5 301 aa8.09□□□□□ -1.11
VPS25-201ENST00000253794 H3BT86 120 aa8.08□□□□□ -1.12
VPS25-201ENST00000253794 K7EP34 96 aa8.08□□□□□ -1.12
VPS25-201ENST00000253794 Q5XG85 94 aa8.08□□□□□ -1.12
VPS25-201ENST00000253794 Q6Q795 121 aa8.08□□□□□ -1.12
VPS25-201ENST00000253794 HMCN2Q8NDA2 5059 aa8.07□□□□□ -1.12
VPS25-201ENST00000253794 A0A0G2JQZ4 141 aa8.06□□□□□ -1.12
VPS25-201ENST00000253794 TRBV7-4A0A0J9YYF1 115 aa8.05□□□□□ -1.12
VPS25-201ENST00000253794 JMJD7-PLA2G4BH0Y9G9 81 aa8.04□□□□□ -1.12
VPS25-201ENST00000253794 OBSCN-AS1Q96MR7 158 aa8.04□□□□□ -1.12
VPS25-201ENST00000253794 LIMD2Q9BT23 127 aa8.04□□□□□ -1.12
VPS25-201ENST00000253794 RBM3P98179 157 aaKnown RBP8.03□□□□□ -1.12
VPS25-201ENST00000253794 GTF2H5Q6ZYL4 71 aa8.03□□□□□ -1.12
VPS25-201ENST00000253794 TEN1Q86WV5 123 aa8.03□□□□□ -1.12
VPS25-201ENST00000253794 PRO0461Q9UI25 63 aa8.03□□□□□ -1.12
VPS25-201ENST00000253794 TRBV7-7A0A0K0K1E9 115 aa8.02□□□□□ -1.13
VPS25-201ENST00000253794 HRCT1Q6UXD1 115 aa8.01□□□□□ -1.13
VPS25-201ENST00000253794 A0A1W2PNM2 257 aa8□□□□□ -1.13
VPS25-201ENST00000253794 SMCPP49901 116 aaPredicted RBP8□□□□□ -1.13
VPS25-201ENST00000253794 ASB16-AS1Q495Z4 193 aa8□□□□□ -1.13
VPS25-201ENST00000253794 FP248Q71RG6 208 aaPredicted RBP7.99□□□□□ -1.13
VPS25-201ENST00000253794 MTURNQ8N3F0 131 aa7.99□□□□□ -1.13
VPS25-201ENST00000253794 DSCR8Q96T75 97 aa7.99□□□□□ -1.13
VPS25-201ENST00000253794 LOC110117498A0A087WWA1 95 aa7.98□□□□□ -1.13
VPS25-201ENST00000253794 A0A1B0GV72 72 aa7.98□□□□□ -1.13
VPS25-201ENST00000253794 PDE6GP18545 87 aa7.98□□□□□ -1.13
VPS25-201ENST00000253794 C21orf62-AS1Q17RA5 79 aa7.97□□□□□ -1.13
VPS25-201ENST00000253794 CCKP06307 115 aa7.96□□□□□ -1.14
VPS25-201ENST00000253794 Q6ZQT0 140 aa7.96□□□□□ -1.14
VPS25-201ENST00000253794 RETNLBQ9BQ08 111 aa7.96□□□□□ -1.14
VPS25-201ENST00000253794 A0A1B0GW54 56 aa7.95□□□□□ -1.14
VPS25-201ENST00000253794 F8W1H4 67 aa7.95□□□□□ -1.14
VPS25-201ENST00000253794 SS18L2Q9UHA2 77 aa7.95□□□□□ -1.14
VPS25-201ENST00000253794 A0A087WSZ3 146 aa7.93□□□□□ -1.14
VPS25-201ENST00000253794 C1orf195Q5TG92 126 aa7.93□□□□□ -1.14
VPS25-201ENST00000253794 C14orf132Q9NPU4 83 aa7.93□□□□□ -1.14
VPS25-201ENST00000253794 PRR4Q16378 134 aa7.92□□□□□ -1.14
VPS25-201ENST00000253794 IGLV7-46A0A075B6I9 117 aa7.9□□□□□ -1.14
VPS25-201ENST00000253794 A0A1B0GV90 55 aa7.89□□□□□ -1.15
VPS25-201ENST00000253794 TPRXLQ17RH7 258 aa7.89□□□□□ -1.15
VPS25-201ENST00000253794 LRP2P98164 4655 aa7.89□□□□□ -1.15
VPS25-201ENST00000253794 Q96NJ1 140 aa7.87□□□□□ -1.15
VPS25-201ENST00000253794 VPS25Q9BRG1 176 aa7.87□□□□□ -1.15
VPS25-201ENST00000253794 LPAP08519 4548 aa7.87□□□□□ -1.15
VPS25-201ENST00000253794 KRTAP13-3Q3SY46 172 aa7.84□□□□□ -1.15
VPS25-201ENST00000253794 LINC00472Q9H8W2 130 aa7.84□□□□□ -1.15
VPS25-201ENST00000253794 ETDBQ3ZM63 59 aa7.83□□□□□ -1.16
VPS25-201ENST00000253794 J3KT08 172 aa7.76□□□□□ -1.17
VPS25-201ENST00000253794 IGKV4-1P06312 121 aa7.74□□□□□ -1.17
VPS25-201ENST00000253794 NREPQ16612 68 aa7.74□□□□□ -1.17
VPS25-201ENST00000253794 CDIP1Q9H305 208 aa7.74□□□□□ -1.17
VPS25-201ENST00000253794 XP32Q5T750 250 aa7.72□□□□□ -1.17
VPS25-201ENST00000253794 SIGMAR1Q99720 223 aa7.72□□□□□ -1.17
VPS25-201ENST00000253794 UBR4Q5T4S7 5183 aa7.71□□□□□ -1.17
VPS25-201ENST00000253794 DEFB116Q30KQ4 102 aa7.71□□□□□ -1.18
VPS25-201ENST00000253794 MUC17Q685J3 4493 aa7.71□□□□□ -1.18
VPS25-201ENST00000253794 Q6ZVQ6 151 aa7.7□□□□□ -1.18
VPS25-201ENST00000253794 LINC00846Q9NV44 126 aa7.7□□□□□ -1.18
VPS25-201ENST00000253794 FAM240AA0A1B0GVK7 77 aa7.69□□□□□ -1.18
VPS25-201ENST00000253794 C9orf92A6NGG3 77 aa7.69□□□□□ -1.18
VPS25-201ENST00000253794 ACYP1P07311 99 aa7.68□□□□□ -1.18
VPS25-201ENST00000253794 A0A1B0GVX0 72 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms