RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 PKIGQ9Y2B9 76 aa11.7□□□□□ -0.54
LRP3-201ENST00000253193 H0Y9J4 135 aa11.7□□□□□ -0.54
LRP3-201ENST00000253193 C14orf177Q52M58 125 aa11.7□□□□□ -0.54
LRP3-201ENST00000253193 KRTAP1-5Q9BYS1 174 aa11.7□□□□□ -0.54
LRP3-201ENST00000253193 A0A1B0GW54 56 aa11.68□□□□□ -0.54
LRP3-201ENST00000253193 BRK1Q8WUW1 75 aa11.68□□□□□ -0.54
LRP3-201ENST00000253193 MP68P56378 58 aa11.68□□□□□ -0.54
LRP3-201ENST00000253193 DSCR10P59022 87 aa11.68□□□□□ -0.54
LRP3-201ENST00000253193 TENM2Q9NT68 2774 aa11.68□□□□□ -0.54
LRP3-201ENST00000253193 B9D2Q9BPU9 175 aa11.67□□□□□ -0.54
LRP3-201ENST00000253193 PRO0628Q9UI54 55 aa11.66□□□□□ -0.54
LRP3-201ENST00000253193 SRRM2Q9UQ35 2752 aaKnown RBP11.65□□□□□ -0.54
LRP3-201ENST00000253193 TNP2Q05952 138 aa11.65□□□□□ -0.54
LRP3-201ENST00000253193 SPRR4Q96PI1 79 aa11.64□□□□□ -0.55
LRP3-201ENST00000253193 IGLV9-49A0A0B4J1Y8 123 aa11.64□□□□□ -0.55
LRP3-201ENST00000253193 LINC00208Q96KT6 92 aa11.63□□□□□ -0.55
LRP3-201ENST00000253193 CSMD3Q7Z407 3707 aa11.61□□□□□ -0.55
LRP3-201ENST00000253193 CASC2Q6XLA1 102 aa11.58□□□□□ -0.56
LRP3-201ENST00000253193 CNBPP62633 177 aaKnown RBP11.56□□□□□ -0.56
LRP3-201ENST00000253193 NDUFB1O75438 58 aa11.56□□□□□ -0.56
LRP3-201ENST00000253193 MDFIQ99750 246 aa11.55□□□□□ -0.56
LRP3-201ENST00000253193 NDUFS5O43920 106 aa11.55□□□□□ -0.56
LRP3-201ENST00000253193 APLNQ9ULZ1 77 aa11.52□□□□□ -0.56
LRP3-201ENST00000253193 CDK2AP2O75956 126 aa11.52□□□□□ -0.57
LRP3-201ENST00000253193 KRTAP11-1Q8IUC1 163 aa11.51□□□□□ -0.57
LRP3-201ENST00000253193 NBDYA0A0U1RRE5 68 aa11.51□□□□□ -0.57
LRP3-201ENST00000253193 H0Y9P7 68 aa11.5□□□□□ -0.57
LRP3-201ENST00000253193 C9orf163Q8N9P6 203 aa11.5□□□□□ -0.57
LRP3-201ENST00000253193 C1orf64Q8NEQ6 169 aa11.49□□□□□ -0.57
LRP3-201ENST00000253193 DNAH10Q8IVF4 4471 aa11.49□□□□□ -0.57
LRP3-201ENST00000253193 PSPHP1O15172 72 aa11.46□□□□□ -0.57
LRP3-201ENST00000253193 hDV103S1A0JD37 113 aa11.46□□□□□ -0.57
LRP3-201ENST00000253193 LYSTQ99698 3801 aa11.45□□□□□ -0.58
LRP3-201ENST00000253193 PRR15Q8IV56 129 aa11.43□□□□□ -0.58
LRP3-201ENST00000253193 NUPR2A6NF83 97 aa11.43□□□□□ -0.58
LRP3-201ENST00000253193 PANO1I0J062 215 aa11.43□□□□□ -0.58
LRP3-201ENST00000253193 COL7A1Q02388 2944 aa11.42□□□□□ -0.58
LRP3-201ENST00000253193 A8MWP4 228 aa11.42□□□□□ -0.58
LRP3-201ENST00000253193 ZCCHC13Q8WW36 166 aaKnown RBP11.41□□□□□ -0.58
LRP3-201ENST00000253193 SPINK6Q6UWN8 80 aa11.41□□□□□ -0.58
LRP3-201ENST00000253193 ANAPC11Q9NYG5 84 aa11.41□□□□□ -0.58
LRP3-201ENST00000253193 LCE6AA0A183 80 aa11.4□□□□□ -0.58
LRP3-201ENST00000253193 IGHV6-1A0A0B4J1U7 121 aa11.4□□□□□ -0.58
LRP3-201ENST00000253193 PCOTHQ58A44 107 aa11.4□□□□□ -0.59
LRP3-201ENST00000253193 CMYA5Q8N3K9 4069 aa11.39□□□□□ -0.59
LRP3-201ENST00000253193 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.38□□□□□ -0.59
LRP3-201ENST00000253193 DNAH1Q9P2D7 4330 aa11.38□□□□□ -0.59
LRP3-201ENST00000253193 IGLV8-61A0A075B6I0 122 aa11.37□□□□□ -0.59
LRP3-201ENST00000253193 MOBPQ13875 183 aa11.37□□□□□ -0.59
LRP3-201ENST00000253193 C1orf195Q5TG92 126 aa11.35□□□□□ -0.59
LRP3-201ENST00000253193 TRAV22A0A0B4J277 110 aa11.34□□□□□ -0.59
LRP3-201ENST00000253193 LINC00472Q9H8W2 130 aa11.31□□□□□ -0.6
LRP3-201ENST00000253193 RTL8CO15255 209 aa11.3□□□□□ -0.6
LRP3-201ENST00000253193 A8MU10 97 aa11.29□□□□□ -0.6
LRP3-201ENST00000253193 ZNF706Q9Y5V0 76 aaPredicted RBP11.29□□□□□ -0.6
LRP3-201ENST00000253193 SPRR1BP22528 89 aa11.28□□□□□ -0.6
LRP3-201ENST00000253193 A0A087WTM6 91 aa11.28□□□□□ -0.6
LRP3-201ENST00000253193 IGLV5-52A0A0A0MRZ9 124 aa11.28□□□□□ -0.6
LRP3-201ENST00000253193 A8MUN3 132 aa11.27□□□□□ -0.6
LRP3-201ENST00000253193 CIRBP-AS1Q8TBR5 109 aa11.27□□□□□ -0.6
LRP3-201ENST00000253193 PSORS1C2Q9UIG4 136 aa11.27□□□□□ -0.61
LRP3-201ENST00000253193 DNAH9Q9NYC9 4486 aa11.26□□□□□ -0.61
LRP3-201ENST00000253193 HUWE1Q7Z6Z7 4374 aaKnown RBP11.26□□□□□ -0.61
LRP3-201ENST00000253193 LY6G6CO95867 125 aa11.26□□□□□ -0.61
LRP3-201ENST00000253193 Q1T7F1 81 aa11.25□□□□□ -0.61
LRP3-201ENST00000253193 KRTAP29-1A8MX34 341 aaPredicted RBP11.24□□□□□ -0.61
LRP3-201ENST00000253193 SPACA4Q8TDM5 124 aa11.23□□□□□ -0.61
LRP3-201ENST00000253193 MMP24-AS1A0A0U1RRL7 71 aa11.21□□□□□ -0.61
LRP3-201ENST00000253193 CYP4F30PQ9H0H9 118 aa11.21□□□□□ -0.62
LRP3-201ENST00000253193 TGP01266 2768 aa11.21□□□□□ -0.62
LRP3-201ENST00000253193 H3BPC8 53 aa11.2□□□□□ -0.62
LRP3-201ENST00000253193 CHKB-CPT1BH3BT56 60 aa11.2□□□□□ -0.62
LRP3-201ENST00000253193 PRR15LQ9BU68 103 aa11.2□□□□□ -0.62
LRP3-201ENST00000253193 C8orf17Q9NRJ1 99 aa11.2□□□□□ -0.62
LRP3-201ENST00000253193 V9GYY9 64 aa11.19□□□□□ -0.62
LRP3-201ENST00000253193 C1orf134Q5TEV5 83 aa11.18□□□□□ -0.62
LRP3-201ENST00000253193 Q6ZRN7 208 aaPredicted RBP11.18□□□□□ -0.62
LRP3-201ENST00000253193 DNAH3Q8TD57 4116 aa11.17□□□□□ -0.62
LRP3-201ENST00000253193 ZNF861PO60384 105 aa11.16□□□□□ -0.62
LRP3-201ENST00000253193 TP53AIP1Q9HCN2 124 aa11.14□□□□□ -0.63
LRP3-201ENST00000253193 A0A1B0GVX0 72 aa11.13□□□□□ -0.63
LRP3-201ENST00000253193 SPTSSBQ8NFR3 76 aa11.13□□□□□ -0.63
LRP3-201ENST00000253193 RETNLBQ9BQ08 111 aa11.12□□□□□ -0.63
LRP3-201ENST00000253193 COA5Q86WW8 74 aa11.12□□□□□ -0.63
LRP3-201ENST00000253193 DNAH7Q8WXX0 4024 aa11.12□□□□□ -0.63
LRP3-201ENST00000253193 KRTAP13-1Q8IUC0 172 aa11.11□□□□□ -0.63
LRP3-201ENST00000253193 Q5VV11 94 aa11.1□□□□□ -0.63
LRP3-201ENST00000253193 MRPL34Q9BQ48 92 aaKnown RBP11.1□□□□□ -0.63
LRP3-201ENST00000253193 SPANXA2-OT1Q8N9U9 137 aa11.1□□□□□ -0.63
LRP3-201ENST00000253193 WWC2-AS2Q96NR7 200 aa11.09□□□□□ -0.63
LRP3-201ENST00000253193 A6NED7 52 aa11.09□□□□□ -0.63
LRP3-201ENST00000253193 SPAG11AQ6PDA7 123 aa11.08□□□□□ -0.64
LRP3-201ENST00000253193 Q8N9P0 234 aaPredicted RBP11.06□□□□□ -0.64
LRP3-201ENST00000253193 LIMD2Q9BT23 127 aa11.05□□□□□ -0.64
LRP3-201ENST00000253193 A0A087X002 238 aa11.04□□□□□ -0.64
LRP3-201ENST00000253193 PMAIP1Q13794 54 aa11.04□□□□□ -0.64
LRP3-201ENST00000253193 NOTCH2NLQ7Z3S9 236 aa11.04□□□□□ -0.64
LRP3-201ENST00000253193 Q96NJ1 140 aa11.03□□□□□ -0.64
LRP3-201ENST00000253193 SEC61GP60059 68 aa11.02□□□□□ -0.64
LRP3-201ENST00000253193 IGLV7-43P04211 117 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms