RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 Q6ZVQ6 151 aa14.41□□□□□ -0.1
SYNGR3-201ENST00000248121 BCE1O60756 84 aa14.39□□□□□ -0.11
SYNGR3-201ENST00000248121 HAMPP81172 84 aa14.39□□□□□ -0.11
SYNGR3-201ENST00000248121 KRTAP13-1Q8IUC0 172 aa14.39□□□□□ -0.11
SYNGR3-201ENST00000248121 PLAC8Q9NZF1 115 aa14.38□□□□□ -0.11
SYNGR3-201ENST00000248121 FAM236AA0A1B0GUQ0 79 aa14.37□□□□□ -0.11
SYNGR3-201ENST00000248121 FAM236BA0A1B0GV22 79 aa14.37□□□□□ -0.11
SYNGR3-201ENST00000248121 UBE2AP49459 152 aa14.37□□□□□ -0.11
SYNGR3-201ENST00000248121 C1orf137Q5JT78 98 aa14.36□□□□□ -0.11
SYNGR3-201ENST00000248121 ATP5EP2Q5VTU8 51 aa14.36□□□□□ -0.11
SYNGR3-201ENST00000248121 ANAPC13Q9BS18 74 aa14.35□□□□□ -0.11
SYNGR3-201ENST00000248121 A0A1W2PNM2 257 aa14.35□□□□□ -0.11
SYNGR3-201ENST00000248121 A0A087WVE0 104 aa14.34□□□□□ -0.11
SYNGR3-201ENST00000248121 RYR3Q15413 4870 aa14.31□□□□□ -0.12
SYNGR3-201ENST00000248121 A0A1B0GVY2 172 aa14.31□□□□□ -0.12
SYNGR3-201ENST00000248121 Q6ZSA8 131 aa14.31□□□□□ -0.12
SYNGR3-201ENST00000248121 LINC00336Q6ZUF6 198 aa14.31□□□□□ -0.12
SYNGR3-201ENST00000248121 CIRBP-AS1Q8TBR5 109 aa14.31□□□□□ -0.12
SYNGR3-201ENST00000248121 SPRR1BP22528 89 aa14.3□□□□□ -0.12
SYNGR3-201ENST00000248121 HIST1H4AP62805 103 aaKnown RBP14.3□□□□□ -0.12
SYNGR3-201ENST00000248121 SCXQ7RTU7 201 aa14.29□□□□□ -0.12
SYNGR3-201ENST00000248121 Q8NBF4 154 aa14.28□□□□□ -0.12
SYNGR3-201ENST00000248121 PSORS1C2Q9UIG4 136 aa14.28□□□□□ -0.12
SYNGR3-201ENST00000248121 A0A0G2JQZ4 141 aa14.27□□□□□ -0.12
SYNGR3-201ENST00000248121 LRP1BQ9NZR2 4599 aa14.27□□□□□ -0.13
SYNGR3-201ENST00000248121 IGLV8-61A0A075B6I0 122 aa14.26□□□□□ -0.13
SYNGR3-201ENST00000248121 F8WEM9 126 aa14.26□□□□□ -0.13
SYNGR3-201ENST00000248121 IGFL1Q6UW32 110 aa14.25□□□□□ -0.13
SYNGR3-201ENST00000248121 SPRR4Q96PI1 79 aa14.25□□□□□ -0.13
SYNGR3-201ENST00000248121 CXCL6P80162 114 aa14.23□□□□□ -0.13
SYNGR3-201ENST00000248121 DYNC1H1Q14204 4646 aaKnown RBP14.22□□□□□ -0.13
SYNGR3-201ENST00000248121 A0A1B0GW54 56 aa14.21□□□□□ -0.13
SYNGR3-201ENST00000248121 NREPQ16612 68 aa14.2□□□□□ -0.14
SYNGR3-201ENST00000248121 CRYGAP11844 174 aa14.18□□□□□ -0.14
SYNGR3-201ENST00000248121 CCDC179H3BU77 68 aa14.13□□□□□ -0.15
SYNGR3-201ENST00000248121 ZNF861PO60384 105 aa14.13□□□□□ -0.15
SYNGR3-201ENST00000248121 ATOX1O00244 68 aa14.11□□□□□ -0.15
SYNGR3-201ENST00000248121 LINC00483Q53H64 154 aa14.1□□□□□ -0.15
SYNGR3-201ENST00000248121 Q8N9L7 120 aa14.09□□□□□ -0.15
SYNGR3-201ENST00000248121 BPY2O14599 106 aa14.08□□□□□ -0.15
SYNGR3-201ENST00000248121 APOBP04114 4563 aaKnown RBP14.07□□□□□ -0.16
SYNGR3-201ENST00000248121 IGLV7-43P04211 117 aa14.06□□□□□ -0.16
SYNGR3-201ENST00000248121 IGKV4-1P06312 121 aa14.05□□□□□ -0.16
SYNGR3-201ENST00000248121 A0A087WSZ3 146 aa14.04□□□□□ -0.16
SYNGR3-201ENST00000248121 ZNF706Q9Y5V0 76 aaPredicted RBP14.03□□□□□ -0.16
SYNGR3-201ENST00000248121 VPS13BQ7Z7G8 4022 aa14.03□□□□□ -0.16
SYNGR3-201ENST00000248121 IGLV9-49A0A0B4J1Y8 123 aa14.02□□□□□ -0.17
SYNGR3-201ENST00000248121 ANAPC11Q9NYG5 84 aa14.02□□□□□ -0.17
SYNGR3-201ENST00000248121 COX7CP15954 63 aa13.99□□□□□ -0.17
SYNGR3-201ENST00000248121 DSCR10P59022 87 aa13.99□□□□□ -0.17
SYNGR3-201ENST00000248121 C9orf153Q5TBE3 101 aa13.97□□□□□ -0.17
SYNGR3-201ENST00000248121 SERP2Q8N6R1 65 aa13.97□□□□□ -0.17
SYNGR3-201ENST00000248121 UQCRQO14949 82 aa13.96□□□□□ -0.17
SYNGR3-201ENST00000248121 SMR3BP02814 79 aaPredicted RBP13.95□□□□□ -0.18
SYNGR3-201ENST00000248121 DEFB116Q30KQ4 102 aa13.93□□□□□ -0.18
SYNGR3-201ENST00000248121 MOBPQ13875 183 aa13.91□□□□□ -0.18
SYNGR3-201ENST00000248121 K7EQZ3 153 aa13.9□□□□□ -0.18
SYNGR3-201ENST00000248121 RPL37AP61513 92 aaKnown RBP13.9□□□□□ -0.18
SYNGR3-201ENST00000248121 FAT1Q14517 4588 aa13.89□□□□□ -0.19
SYNGR3-201ENST00000248121 LINC00472Q9H8W2 130 aa13.86□□□□□ -0.19
SYNGR3-201ENST00000248121 HRCT1Q6UXD1 115 aa13.83□□□□□ -0.2
SYNGR3-201ENST00000248121 TRAV7A0A075B6U4 112 aa13.82□□□□□ -0.2
SYNGR3-201ENST00000248121 EPPK1P58107 5090 aaKnown RBP13.81□□□□□ -0.2
SYNGR3-201ENST00000248121 CYSTM1Q9H1C7 97 aa13.81□□□□□ -0.2
SYNGR3-201ENST00000248121 SMIM20Q8N5G0 67 aa13.79□□□□□ -0.2
SYNGR3-201ENST00000248121 KRTAP10-4P60372 401 aaPredicted RBP13.78□□□□□ -0.2
SYNGR3-201ENST00000248121 Q96NJ1 140 aa13.77□□□□□ -0.21
SYNGR3-201ENST00000248121 HSPG2P98160 4391 aa13.77□□□□□ -0.21
SYNGR3-201ENST00000248121 OCR1Q9BZK8 76 aa13.74□□□□□ -0.21
SYNGR3-201ENST00000248121 A0A087X002 238 aa13.73□□□□□ -0.21
SYNGR3-201ENST00000248121 KRTAP1-4P0C5Y4 121 aa13.71□□□□□ -0.21
SYNGR3-201ENST00000248121 A8MWP4 228 aa13.71□□□□□ -0.21
SYNGR3-201ENST00000248121 HCG22E2RYF7 251 aa13.71□□□□□ -0.21
SYNGR3-201ENST00000248121 PRR15Q8IV56 129 aa13.7□□□□□ -0.22
SYNGR3-201ENST00000248121 C20orf197Q8N268 126 aa13.7□□□□□ -0.22
SYNGR3-201ENST00000248121 KRTAP13-2Q52LG2 175 aa13.69□□□□□ -0.22
SYNGR3-201ENST00000248121 KRTAP17-1Q9BYP8 105 aa13.69□□□□□ -0.22
SYNGR3-201ENST00000248121 SS18L2Q9UHA2 77 aa13.69□□□□□ -0.22
SYNGR3-201ENST00000248121 SSBP3-AS1Q7Z2R9 100 aa13.68□□□□□ -0.22
SYNGR3-201ENST00000248121 RYR1P21817 5038 aa13.67□□□□□ -0.22
SYNGR3-201ENST00000248121 J3KT08 172 aa13.66□□□□□ -0.22
SYNGR3-201ENST00000248121 KIAA1109Q2LD37 5005 aa13.65□□□□□ -0.22
SYNGR3-201ENST00000248121 FAM229BQ4G0N7 80 aa13.64□□□□□ -0.23
SYNGR3-201ENST00000248121 WFDC13Q8IUB5 93 aa13.64□□□□□ -0.23
SYNGR3-201ENST00000248121 CDK2AP2O75956 126 aa13.63□□□□□ -0.23
SYNGR3-201ENST00000248121 KRTAP29-1A8MX34 341 aaPredicted RBP13.63□□□□□ -0.23
SYNGR3-201ENST00000248121 SPINK6Q6UWN8 80 aa13.63□□□□□ -0.23
SYNGR3-201ENST00000248121 CD164Q04900 197 aa13.62□□□□□ -0.23
SYNGR3-201ENST00000248121 KLKP1Q107X0 134 aa13.59□□□□□ -0.23
SYNGR3-201ENST00000248121 SNURFQ9Y675 71 aa13.59□□□□□ -0.23
SYNGR3-201ENST00000248121 MMP24-AS1A0A0U1RRL7 71 aa13.55□□□□□ -0.24
SYNGR3-201ENST00000248121 PLA2G1BP04054 148 aaKnown RBP13.55□□□□□ -0.24
SYNGR3-201ENST00000248121 Q5VSD8 79 aa13.55□□□□□ -0.24
SYNGR3-201ENST00000248121 CASC2Q6XLA1 102 aa13.55□□□□□ -0.24
SYNGR3-201ENST00000248121 TMEM254Q8TBM7 123 aa13.55□□□□□ -0.24
SYNGR3-201ENST00000248121 NDUFB1O75438 58 aa13.54□□□□□ -0.24
SYNGR3-201ENST00000248121 PKHD1L1Q86WI1 4243 aa13.53□□□□□ -0.24
SYNGR3-201ENST00000248121 FAM229AH3BQW9 127 aa13.51□□□□□ -0.25
SYNGR3-201ENST00000248121 H7BZZ5 65 aa13.49□□□□□ -0.25
SYNGR3-201ENST00000248121 PRR26Q8N8Z3 221 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms