RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 C8orf17Q9NRJ1 99 aa10.12□□□□□ -0.79
SIN3B-201ENST00000248054 SSBP3-AS1Q7Z2R9 100 aa10.11□□□□□ -0.79
SIN3B-201ENST00000248054 A0A1W2PNN7 141 aa10.1□□□□□ -0.79
SIN3B-201ENST00000248054 ATP11AUNQ6ZP68 121 aa10.1□□□□□ -0.79
SIN3B-201ENST00000248054 SPANXA2-OT1Q8N9U9 137 aa10.1□□□□□ -0.79
SIN3B-201ENST00000248054 TYMSOSQ8TAI1 123 aa10.1□□□□□ -0.79
SIN3B-201ENST00000248054 IGLV5-48A0A075B6I7 105 aa10.09□□□□□ -0.79
SIN3B-201ENST00000248054 MGAM2Q2M2H8 2515 aa10.08□□□□□ -0.8
SIN3B-201ENST00000248054 A0A1B0GVX0 72 aa10.08□□□□□ -0.8
SIN3B-201ENST00000248054 RBM12B-AS1Q9P1G2 102 aa10.08□□□□□ -0.8
SIN3B-201ENST00000248054 DCHS1Q96JQ0 3298 aa10.05□□□□□ -0.8
SIN3B-201ENST00000248054 UQCR11O14957 56 aa10.04□□□□□ -0.8
SIN3B-201ENST00000248054 A0A1W2PNM2 257 aa10.03□□□□□ -0.8
SIN3B-201ENST00000248054 PLA2G1BP04054 148 aaKnown RBP10.01□□□□□ -0.81
SIN3B-201ENST00000248054 IGLV7-43P04211 117 aa10□□□□□ -0.81
SIN3B-201ENST00000248054 SPRR4Q96PI1 79 aa10□□□□□ -0.81
SIN3B-201ENST00000248054 TEX15Q9BXT5 2789 aa10□□□□□ -0.81
SIN3B-201ENST00000248054 Q96NJ1 140 aa10□□□□□ -0.81
SIN3B-201ENST00000248054 PSORS1C2Q9UIG4 136 aa9.99□□□□□ -0.81
SIN3B-201ENST00000248054 FLNCQ14315 2725 aa9.99□□□□□ -0.81
SIN3B-201ENST00000248054 LRBAP50851 2863 aa9.99□□□□□ -0.81
SIN3B-201ENST00000248054 KRTAP26-1Q6PEX3 210 aa9.97□□□□□ -0.81
SIN3B-201ENST00000248054 ZZEF1O43149 2961 aa9.97□□□□□ -0.81
SIN3B-201ENST00000248054 Q8NDZ9 215 aa9.97□□□□□ -0.81
SIN3B-201ENST00000248054 LCA10Q71F78 164 aa9.96□□□□□ -0.81
SIN3B-201ENST00000248054 SPRR1AP35321 89 aa9.95□□□□□ -0.82
SIN3B-201ENST00000248054 KALRNO60229 2985 aa9.95□□□□□ -0.82
SIN3B-201ENST00000248054 CHD6Q8TD26 2715 aa9.95□□□□□ -0.82
SIN3B-201ENST00000248054 MAP1AP78559 2803 aaPredicted RBP9.93□□□□□ -0.82
SIN3B-201ENST00000248054 TACC2O95359 2948 aa9.93□□□□□ -0.82
SIN3B-201ENST00000248054 RELNP78509 3460 aa9.92□□□□□ -0.82
SIN3B-201ENST00000248054 SETXQ7Z333 2677 aaKnown RBP9.91□□□□□ -0.82
SIN3B-201ENST00000248054 Q5VV11 94 aa9.91□□□□□ -0.82
SIN3B-201ENST00000248054 CDC42SE1Q9NRR8 79 aa9.91□□□□□ -0.82
SIN3B-201ENST00000248054 MIR22HGQ0VDD5 57 aa9.9□□□□□ -0.82
SIN3B-201ENST00000248054 SPENQ96T58 3664 aaKnown RBP9.9□□□□□ -0.82
SIN3B-201ENST00000248054 DSCR10P59022 87 aa9.9□□□□□ -0.83
SIN3B-201ENST00000248054 A0A0G2JQZ4 141 aa9.88□□□□□ -0.83
SIN3B-201ENST00000248054 TEP1Q99973 2627 aaKnown RBP9.87□□□□□ -0.83
SIN3B-201ENST00000248054 TNP2Q05952 138 aa9.87□□□□□ -0.83
SIN3B-201ENST00000248054 Q8N9P0 234 aaPredicted RBP9.87□□□□□ -0.83
SIN3B-201ENST00000248054 SMG1Q96Q15 3661 aaKnown RBP9.86□□□□□ -0.83
SIN3B-201ENST00000248054 PLAC8Q9NZF1 115 aa9.86□□□□□ -0.83
SIN3B-201ENST00000248054 LINC00304Q8N9R0 145 aa9.85□□□□□ -0.83
SIN3B-201ENST00000248054 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.84□□□□□ -0.83
SIN3B-201ENST00000248054 COL12A1Q99715 3063 aa9.84□□□□□ -0.83
SIN3B-201ENST00000248054 IGLV8-61A0A075B6I0 122 aa9.82□□□□□ -0.84
SIN3B-201ENST00000248054 Q75L30 129 aa9.82□□□□□ -0.84
SIN3B-201ENST00000248054 COL6A5A8TX70 2615 aa9.82□□□□□ -0.84
SIN3B-201ENST00000248054 KRTAP1-5Q9BYS1 174 aa9.81□□□□□ -0.84
SIN3B-201ENST00000248054 SPRR1BP22528 89 aa9.81□□□□□ -0.84
SIN3B-201ENST00000248054 GCN1Q92616 2671 aaKnown RBP9.8□□□□□ -0.84
SIN3B-201ENST00000248054 HRNRQ86YZ3 2850 aaPredicted RBP9.79□□□□□ -0.84
SIN3B-201ENST00000248054 UTP20O75691 2785 aaKnown RBP9.79□□□□□ -0.84
SIN3B-201ENST00000248054 ITPR1Q14643 2758 aa9.79□□□□□ -0.84
SIN3B-201ENST00000248054 KMT2BQ9UMN6 2715 aaPredicted RBP9.78□□□□□ -0.84
SIN3B-201ENST00000248054 IGLV7-46A0A075B6I9 117 aa9.77□□□□□ -0.84
SIN3B-201ENST00000248054 BAHCC1Q9P281 2608 aa9.76□□□□□ -0.85
SIN3B-201ENST00000248054 ANAPC11Q9NYG5 84 aa9.76□□□□□ -0.85
SIN3B-201ENST00000248054 BSNQ9UPA5 3926 aa9.76□□□□□ -0.85
SIN3B-201ENST00000248054 H3BS24 57 aa9.76□□□□□ -0.85
SIN3B-201ENST00000248054 UBR5O95071 2799 aaPredicted RBP9.74□□□□□ -0.85
SIN3B-201ENST00000248054 STAB1Q9NY15 2570 aa9.73□□□□□ -0.85
SIN3B-201ENST00000248054 DCHS2Q6V1P9 2916 aa9.73□□□□□ -0.85
SIN3B-201ENST00000248054 ITPR2Q14571 2701 aa9.73□□□□□ -0.85
SIN3B-201ENST00000248054 APCP25054 2843 aa9.72□□□□□ -0.85
SIN3B-201ENST00000248054 ASH1LQ9NR48 2969 aaKnown RBP9.72□□□□□ -0.85
SIN3B-201ENST00000248054 PRAC1Q96KF2 57 aa9.71□□□□□ -0.85
SIN3B-201ENST00000248054 A8MU10 97 aa9.71□□□□□ -0.86
SIN3B-201ENST00000248054 SPINT4Q6UDR6 99 aa9.7□□□□□ -0.86
SIN3B-201ENST00000248054 SMR3BP02814 79 aaPredicted RBP9.69□□□□□ -0.86
SIN3B-201ENST00000248054 CRIPTQ9P021 101 aa9.67□□□□□ -0.86
SIN3B-201ENST00000248054 ZCCHC13Q8WW36 166 aaKnown RBP9.67□□□□□ -0.86
SIN3B-201ENST00000248054 NOTCH1P46531 2555 aa9.67□□□□□ -0.86
SIN3B-201ENST00000248054 Q6ZR54 194 aa9.65□□□□□ -0.86
SIN3B-201ENST00000248054 KRTAP4-16G5E9R7 235 aaPredicted RBP9.65□□□□□ -0.87
SIN3B-201ENST00000248054 LINC01554Q52M75 96 aa9.65□□□□□ -0.87
SIN3B-201ENST00000248054 LINC01558Q9Y6Z2 57 aa9.64□□□□□ -0.87
SIN3B-201ENST00000248054 MMP24-AS1A0A0U1RRL7 71 aa9.63□□□□□ -0.87
SIN3B-201ENST00000248054 SPINK7P58062 85 aa9.62□□□□□ -0.87
SIN3B-201ENST00000248054 HIVEP1P15822 2718 aa9.61□□□□□ -0.87
SIN3B-201ENST00000248054 NSD1Q96L73 2696 aaPredicted RBP9.61□□□□□ -0.87
SIN3B-201ENST00000248054 PRR26Q8N8Z3 221 aa9.61□□□□□ -0.87
SIN3B-201ENST00000248054 CRYBG3Q68DQ2 2970 aa9.6□□□□□ -0.87
SIN3B-201ENST00000248054 NBEAL2Q6ZNJ1 2754 aa9.59□□□□□ -0.87
SIN3B-201ENST00000248054 KRTAP21-3Q3LHN1 58 aa9.58□□□□□ -0.88
SIN3B-201ENST00000248054 C9orf92A6NGG3 77 aa9.58□□□□□ -0.88
SIN3B-201ENST00000248054 LINC00483Q53H64 154 aa9.57□□□□□ -0.88
SIN3B-201ENST00000248054 LINC00472Q9H8W2 130 aa9.57□□□□□ -0.88
SIN3B-201ENST00000248054 A6NN06 94 aa9.56□□□□□ -0.88
SIN3B-201ENST00000248054 LCE6AA0A183 80 aa9.56□□□□□ -0.88
SIN3B-201ENST00000248054 HRES1P13985 223 aa9.55□□□□□ -0.88
SIN3B-201ENST00000248054 J3QL48 77 aa9.54□□□□□ -0.88
SIN3B-201ENST00000248054 ZANQ9Y493 2812 aa9.52□□□□□ -0.88
SIN3B-201ENST00000248054 Q6ZRN7 208 aaPredicted RBP9.52□□□□□ -0.89
SIN3B-201ENST00000248054 CSMD1Q96PZ7 3565 aa9.52□□□□□ -0.89
SIN3B-201ENST00000248054 Q8N1X5 172 aa9.51□□□□□ -0.89
SIN3B-201ENST00000248054 SVEP1Q4LDE5 3571 aa9.5□□□□□ -0.89
SIN3B-201ENST00000248054 KRTAP10-1P60331 282 aa9.47□□□□□ -0.89
SIN3B-201ENST00000248054 KRTAP10-2P60368 255 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms