RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 IGFL1Q6UW32 110 aa8.83□□□□□ -1
NCLN-201ENST00000246117 IGLV5-52A0A0A0MRZ9 124 aa8.82□□□□□ -1
NCLN-201ENST00000246117 C4orf48Q5BLP8 95 aa8.82□□□□□ -1
NCLN-201ENST00000246117 C16orf90A8MZG2 172 aa8.81□□□□□ -1
NCLN-201ENST00000246117 ATP5EP56381 51 aaPredicted RBP8.8□□□□□ -1
NCLN-201ENST00000246117 A6NED7 52 aa8.79□□□□□ -1
NCLN-201ENST00000246117 RPS28P62857 69 aaKnown RBP8.79□□□□□ -1
NCLN-201ENST00000246117 C1orf64Q8NEQ6 169 aa8.79□□□□□ -1
NCLN-201ENST00000246117 TRRAPQ9Y4A5 3859 aa8.79□□□□□ -1
NCLN-201ENST00000246117 NUPR2A6NF83 97 aa8.78□□□□□ -1
NCLN-201ENST00000246117 PRR15LQ9BU68 103 aa8.78□□□□□ -1
NCLN-201ENST00000246117 NBDYA0A0U1RRE5 68 aa8.77□□□□□ -1.01
NCLN-201ENST00000246117 KLKP1Q107X0 134 aa8.75□□□□□ -1.01
NCLN-201ENST00000246117 LINC00336Q6ZUF6 198 aa8.74□□□□□ -1.01
NCLN-201ENST00000246117 hDV103S1A0JD37 113 aa8.72□□□□□ -1.01
NCLN-201ENST00000246117 BCE1O60756 84 aa8.71□□□□□ -1.01
NCLN-201ENST00000246117 C1orf134Q5TEV5 83 aa8.71□□□□□ -1.01
NCLN-201ENST00000246117 KRTAP1-5Q9BYS1 174 aa8.71□□□□□ -1.01
NCLN-201ENST00000246117 C1orf195Q5TG92 126 aa8.7□□□□□ -1.02
NCLN-201ENST00000246117 KRTAP26-1Q6PEX3 210 aa8.7□□□□□ -1.02
NCLN-201ENST00000246117 ZNF706Q9Y5V0 76 aaPredicted RBP8.7□□□□□ -1.02
NCLN-201ENST00000246117 OXTP01178 125 aa8.7□□□□□ -1.02
NCLN-201ENST00000246117 RTL8CO15255 209 aa8.69□□□□□ -1.02
NCLN-201ENST00000246117 SPINK1P00995 79 aa8.68□□□□□ -1.02
NCLN-201ENST00000246117 IGLV5-48A0A075B6I7 105 aa8.67□□□□□ -1.02
NCLN-201ENST00000246117 SPAG11AQ6PDA7 123 aa8.67□□□□□ -1.02
NCLN-201ENST00000246117 TGP01266 2768 aa8.67□□□□□ -1.02
NCLN-201ENST00000246117 DSCR10P59022 87 aa8.66□□□□□ -1.02
NCLN-201ENST00000246117 PMAIP1Q13794 54 aa8.66□□□□□ -1.02
NCLN-201ENST00000246117 SPACA4Q8TDM5 124 aa8.66□□□□□ -1.02
NCLN-201ENST00000246117 ZNF469Q96JG9 3925 aaPredicted RBP8.66□□□□□ -1.02
NCLN-201ENST00000246117 A8MUN3 132 aa8.65□□□□□ -1.02
NCLN-201ENST00000246117 TLX1NBP0CAT3 122 aa8.65□□□□□ -1.02
NCLN-201ENST00000246117 OCR1Q9BZK8 76 aa8.64□□□□□ -1.03
NCLN-201ENST00000246117 C9orf163Q8N9P6 203 aa8.64□□□□□ -1.03
NCLN-201ENST00000246117 DMBT1Q9UGM3 2413 aaPredicted RBP8.64□□□□□ -1.03
NCLN-201ENST00000246117 TRAV22A0A0B4J277 110 aa8.64□□□□□ -1.03
NCLN-201ENST00000246117 A0A1B0GW54 56 aa8.63□□□□□ -1.03
NCLN-201ENST00000246117 IGKV2D-30A0A075B6S6 120 aa8.63□□□□□ -1.03
NCLN-201ENST00000246117 IGKV2-30P06310 120 aa8.63□□□□□ -1.03
NCLN-201ENST00000246117 PRO0628Q9UI54 55 aa8.63□□□□□ -1.03
NCLN-201ENST00000246117 FAM229BQ4G0N7 80 aa8.61□□□□□ -1.03
NCLN-201ENST00000246117 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
NCLN-201ENST00000246117 A8MWP4 228 aa8.6□□□□□ -1.03
NCLN-201ENST00000246117 PRR15Q8IV56 129 aa8.6□□□□□ -1.03
NCLN-201ENST00000246117 APLNQ9ULZ1 77 aa8.6□□□□□ -1.03
NCLN-201ENST00000246117 WIPF1O43516 503 aa8.59□□□□□ -1.03
NCLN-201ENST00000246117 V9GYY9 64 aa8.59□□□□□ -1.03
NCLN-201ENST00000246117 PSORS1C2Q9UIG4 136 aa8.58□□□□□ -1.04
NCLN-201ENST00000246117 PLA2G2DQ9UNK4 145 aa8.57□□□□□ -1.04
NCLN-201ENST00000246117 SRRM2Q9UQ35 2752 aaKnown RBP8.57□□□□□ -1.04
NCLN-201ENST00000246117 A0A087WTM6 91 aa8.57□□□□□ -1.04
NCLN-201ENST00000246117 PANO1I0J062 215 aa8.54□□□□□ -1.04
NCLN-201ENST00000246117 Q5XG85 94 aa8.54□□□□□ -1.04
NCLN-201ENST00000246117 IGLV8-61A0A075B6I0 122 aa8.53□□□□□ -1.04
NCLN-201ENST00000246117 FP248Q71RG6 208 aaPredicted RBP8.53□□□□□ -1.04
NCLN-201ENST00000246117 CNBPP62633 177 aaKnown RBP8.52□□□□□ -1.05
NCLN-201ENST00000246117 SPRR1AP35321 89 aa8.51□□□□□ -1.05
NCLN-201ENST00000246117 SPRR4Q96PI1 79 aa8.51□□□□□ -1.05
NCLN-201ENST00000246117 IGLV5-37A0A075B6J1 123 aa8.5□□□□□ -1.05
NCLN-201ENST00000246117 C8orf17Q9NRJ1 99 aa8.5□□□□□ -1.05
NCLN-201ENST00000246117 COA5Q86WW8 74 aa8.49□□□□□ -1.05
NCLN-201ENST00000246117 KRTAP11-1Q8IUC1 163 aa8.49□□□□□ -1.05
NCLN-201ENST00000246117 KRTAP7-1Q8IUC3 87 aa8.49□□□□□ -1.05
NCLN-201ENST00000246117 ZNF861PO60384 105 aa8.47□□□□□ -1.05
NCLN-201ENST00000246117 SMR3BP02814 79 aaPredicted RBP8.47□□□□□ -1.05
NCLN-201ENST00000246117 MRPL34Q9BQ48 92 aaKnown RBP8.47□□□□□ -1.05
NCLN-201ENST00000246117 TNP2Q05952 138 aa8.46□□□□□ -1.06
NCLN-201ENST00000246117 KRTAP4-16G5E9R7 235 aaPredicted RBP8.44□□□□□ -1.06
NCLN-201ENST00000246117 SEC61GP60059 68 aa8.44□□□□□ -1.06
NCLN-201ENST00000246117 TP53AIP1Q9HCN2 124 aa8.43□□□□□ -1.06
NCLN-201ENST00000246117 A0A1B0GVX0 72 aa8.43□□□□□ -1.06
NCLN-201ENST00000246117 LINC00313P59037 77 aa8.43□□□□□ -1.06
NCLN-201ENST00000246117 LIMD2Q9BT23 127 aa8.42□□□□□ -1.06
NCLN-201ENST00000246117 PRR26Q8N8Z3 221 aa8.41□□□□□ -1.06
NCLN-201ENST00000246117 CSMD3Q7Z407 3707 aa8.41□□□□□ -1.06
NCLN-201ENST00000246117 PLA2G1BP04054 148 aaKnown RBP8.4□□□□□ -1.06
NCLN-201ENST00000246117 FLG2Q5D862 2391 aaPredicted RBP8.4□□□□□ -1.06
NCLN-201ENST00000246117 TYMSOSQ8TAI1 123 aa8.38□□□□□ -1.07
NCLN-201ENST00000246117 COL7A1Q02388 2944 aa8.38□□□□□ -1.07
NCLN-201ENST00000246117 Q96NJ1 140 aa8.38□□□□□ -1.07
NCLN-201ENST00000246117 C7orf65Q6ZTY9 151 aa8.37□□□□□ -1.07
NCLN-201ENST00000246117 IGLV7-43P04211 117 aa8.37□□□□□ -1.07
NCLN-201ENST00000246117 H3BPC8 53 aa8.35□□□□□ -1.07
NCLN-201ENST00000246117 MMP24-AS1A0A0U1RRL7 71 aa8.33□□□□□ -1.08
NCLN-201ENST00000246117 A0A1B0GU69 56 aa8.33□□□□□ -1.08
NCLN-201ENST00000246117 LINC00472Q9H8W2 130 aa8.33□□□□□ -1.08
NCLN-201ENST00000246117 C9orf92A6NGG3 77 aa8.32□□□□□ -1.08
NCLN-201ENST00000246117 ACYP2P14621 99 aa8.32□□□□□ -1.08
NCLN-201ENST00000246117 FBN3Q75N90 2809 aa8.32□□□□□ -1.08
NCLN-201ENST00000246117 ANK3Q12955 4377 aaKnown RBP8.3□□□□□ -1.08
NCLN-201ENST00000246117 Q8N9P0 234 aaPredicted RBP8.29□□□□□ -1.08
NCLN-201ENST00000246117 A0A087X002 238 aa8.28□□□□□ -1.08
NCLN-201ENST00000246117 NOTCH2NLQ7Z3S9 236 aa8.28□□□□□ -1.08
NCLN-201ENST00000246117 LOC101927531A0A1B0GV80 90 aa8.27□□□□□ -1.08
NCLN-201ENST00000246117 CD164Q04900 197 aa8.26□□□□□ -1.09
NCLN-201ENST00000246117 Q8N1X5 172 aa8.26□□□□□ -1.09
NCLN-201ENST00000246117 WWC2-AS2Q96NR7 200 aa8.26□□□□□ -1.09
NCLN-201ENST00000246117 ATP11AUNQ6ZP68 121 aa8.24□□□□□ -1.09
NCLN-201ENST00000246117 FAM229AH3BQW9 127 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms