RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 Q6ZSA8 131 aa8.2□□□□□ -1.1
SLIRP-201ENST00000238688 PANO1I0J062 215 aa8.19□□□□□ -1.1
SLIRP-201ENST00000238688 SMCR5Q8TEV8 140 aa8.19□□□□□ -1.1
SLIRP-201ENST00000238688 C14orf132Q9NPU4 83 aa8.19□□□□□ -1.1
SLIRP-201ENST00000238688 TRBV7-4A0A0J9YYF1 115 aa8.18□□□□□ -1.1
SLIRP-201ENST00000238688 UBE2AP49459 152 aa8.18□□□□□ -1.1
SLIRP-201ENST00000238688 LCE2DQ5TA82 110 aaPredicted RBP8.18□□□□□ -1.1
SLIRP-201ENST00000238688 SPRR1BP22528 89 aa8.17□□□□□ -1.1
SLIRP-201ENST00000238688 LINC01547P58512 204 aaPredicted RBP8.17□□□□□ -1.1
SLIRP-201ENST00000238688 KRTAP13-1Q8IUC0 172 aa8.17□□□□□ -1.1
SLIRP-201ENST00000238688 Q8N377 158 aa8.17□□□□□ -1.1
SLIRP-201ENST00000238688 CDIP1Q9H305 208 aa8.17□□□□□ -1.1
SLIRP-201ENST00000238688 GAGE2AQ6NT46 116 aa8.16□□□□□ -1.1
SLIRP-201ENST00000238688 Q6ZQT0 140 aa8.16□□□□□ -1.1
SLIRP-201ENST00000238688 ZNF706Q9Y5V0 76 aaPredicted RBP8.16□□□□□ -1.1
SLIRP-201ENST00000238688 SIGMAR1Q99720 223 aa8.15□□□□□ -1.1
SLIRP-201ENST00000238688 F8WEM9 126 aa8.14□□□□□ -1.11
SLIRP-201ENST00000238688 PRLHP81277 87 aa8.13□□□□□ -1.11
SLIRP-201ENST00000238688 LINC00643Q86TS7 51 aa8.13□□□□□ -1.11
SLIRP-201ENST00000238688 HIGD2AQ9BW72 106 aa8.13□□□□□ -1.11
SLIRP-201ENST00000238688 IGLV8-61A0A075B6I0 122 aa8.12□□□□□ -1.11
SLIRP-201ENST00000238688 ATP5EP2Q5VTU8 51 aa8.12□□□□□ -1.11
SLIRP-201ENST00000238688 FAM229AH3BQW9 127 aa8.11□□□□□ -1.11
SLIRP-201ENST00000238688 ERC2-IT1O76042 136 aa8.11□□□□□ -1.11
SLIRP-201ENST00000238688 RPL37AP61513 92 aaKnown RBP8.11□□□□□ -1.11
SLIRP-201ENST00000238688 SCGB1A1P11684 91 aa8.1□□□□□ -1.11
SLIRP-201ENST00000238688 Q6JHZ5 121 aa8.1□□□□□ -1.11
SLIRP-201ENST00000238688 KRTAP11-1Q8IUC1 163 aa8.1□□□□□ -1.11
SLIRP-201ENST00000238688 IMUPQ9GZP8 106 aa8.1□□□□□ -1.11
SLIRP-201ENST00000238688 PSORS1C2Q9UIG4 136 aa8.1□□□□□ -1.11
SLIRP-201ENST00000238688 ZNF861PO60384 105 aa8.09□□□□□ -1.11
SLIRP-201ENST00000238688 KRTAP10-4P60372 401 aaPredicted RBP8.09□□□□□ -1.11
SLIRP-201ENST00000238688 SCXQ7RTU7 201 aa8.09□□□□□ -1.11
SLIRP-201ENST00000238688 DEFB105AQ8NG35 78 aa8.09□□□□□ -1.11
SLIRP-201ENST00000238688 UBL5Q9BZL1 73 aa8.09□□□□□ -1.11
SLIRP-201ENST00000238688 Q6Q795 121 aa8.08□□□□□ -1.12
SLIRP-201ENST00000238688 ST20-AS1Q8NBB2 130 aa8.08□□□□□ -1.12
SLIRP-201ENST00000238688 CIRBP-AS1Q8TBR5 109 aa8.08□□□□□ -1.12
SLIRP-201ENST00000238688 LINC00483Q53H64 154 aa8.07□□□□□ -1.12
SLIRP-201ENST00000238688 SMIM29Q86T20 159 aa8.07□□□□□ -1.12
SLIRP-201ENST00000238688 LRP1Q07954 4544 aaKnown RBP8.07□□□□□ -1.12
SLIRP-201ENST00000238688 PKHD1L1Q86WI1 4243 aa8.06□□□□□ -1.12
SLIRP-201ENST00000238688 C1orf137Q5JT78 98 aa8.06□□□□□ -1.12
SLIRP-201ENST00000238688 TRBV7-7A0A0K0K1E9 115 aa8.05□□□□□ -1.12
SLIRP-201ENST00000238688 IGLV7-43P04211 117 aa8.05□□□□□ -1.12
SLIRP-201ENST00000238688 LINC00846Q9NV44 126 aa8.05□□□□□ -1.12
SLIRP-201ENST00000238688 FAT3Q8TDW7 4589 aa8.04□□□□□ -1.12
SLIRP-201ENST00000238688 Q8NBF4 154 aa8.04□□□□□ -1.12
SLIRP-201ENST00000238688 SPRR4Q96PI1 79 aa8.04□□□□□ -1.12
SLIRP-201ENST00000238688 PLA2G1BP04054 148 aaKnown RBP8.03□□□□□ -1.12
SLIRP-201ENST00000238688 A0A1B0GV72 72 aa8.01□□□□□ -1.13
SLIRP-201ENST00000238688 MT-ATP8P03928 68 aa8.01□□□□□ -1.13
SLIRP-201ENST00000238688 KRTAP29-1A8MX34 341 aaPredicted RBP8□□□□□ -1.13
SLIRP-201ENST00000238688 CRYGAP11844 174 aa8□□□□□ -1.13
SLIRP-201ENST00000238688 CXCL6P80162 114 aa8□□□□□ -1.13
SLIRP-201ENST00000238688 C3orf22Q8N5N4 141 aa7.98□□□□□ -1.13
SLIRP-201ENST00000238688 Q6ZVQ6 151 aa7.97□□□□□ -1.13
SLIRP-201ENST00000238688 A0A1W2PNM2 257 aa7.96□□□□□ -1.14
SLIRP-201ENST00000238688 IGFL1Q6UW32 110 aa7.96□□□□□ -1.14
SLIRP-201ENST00000238688 NREPQ16612 68 aa7.95□□□□□ -1.14
SLIRP-201ENST00000238688 FAM229BQ4G0N7 80 aa7.95□□□□□ -1.14
SLIRP-201ENST00000238688 J3QL48 77 aa7.94□□□□□ -1.14
SLIRP-201ENST00000238688 SSBP3-AS1Q7Z2R9 100 aa7.91□□□□□ -1.14
SLIRP-201ENST00000238688 CD164Q04900 197 aa7.9□□□□□ -1.14
SLIRP-201ENST00000238688 SS18L2Q9UHA2 77 aa7.9□□□□□ -1.14
SLIRP-201ENST00000238688 HMCN2Q8NDA2 5059 aa7.89□□□□□ -1.15
SLIRP-201ENST00000238688 OXTP01178 125 aa7.89□□□□□ -1.15
SLIRP-201ENST00000238688 C9orf153Q5TBE3 101 aa7.89□□□□□ -1.15
SLIRP-201ENST00000238688 SPINK6Q6UWN8 80 aa7.89□□□□□ -1.15
SLIRP-201ENST00000238688 BPY2O14599 106 aa7.87□□□□□ -1.15
SLIRP-201ENST00000238688 IGLV9-49A0A0B4J1Y8 123 aa7.85□□□□□ -1.15
SLIRP-201ENST00000238688 IGKV3D-7A0A0C4DH55 119 aa7.85□□□□□ -1.15
SLIRP-201ENST00000238688 J3KT08 172 aa7.85□□□□□ -1.15
SLIRP-201ENST00000238688 MT1HL1P0DM35 61 aa7.85□□□□□ -1.15
SLIRP-201ENST00000238688 HIST1H4AP62805 103 aaKnown RBP7.84□□□□□ -1.15
SLIRP-201ENST00000238688 TNXBP22105 4242 aa7.83□□□□□ -1.16
SLIRP-201ENST00000238688 A0A087WSZ3 146 aa7.83□□□□□ -1.16
SLIRP-201ENST00000238688 ATOX1O00244 68 aa7.83□□□□□ -1.16
SLIRP-201ENST00000238688 PCP4P48539 62 aa7.83□□□□□ -1.16
SLIRP-201ENST00000238688 MOBPQ13875 183 aa7.83□□□□□ -1.16
SLIRP-201ENST00000238688 FAM236AA0A1B0GUQ0 79 aa7.81□□□□□ -1.16
SLIRP-201ENST00000238688 FAM236BA0A1B0GV22 79 aa7.81□□□□□ -1.16
SLIRP-201ENST00000238688 SMIM20Q8N5G0 67 aa7.8□□□□□ -1.16
SLIRP-201ENST00000238688 ASB16-AS1Q495Z4 193 aa7.79□□□□□ -1.16
SLIRP-201ENST00000238688 Q5XG85 94 aa7.79□□□□□ -1.16
SLIRP-201ENST00000238688 KRTAP3-3Q9BYR6 98 aa7.79□□□□□ -1.16
SLIRP-201ENST00000238688 KRTAP3-2Q9BYR7 98 aa7.79□□□□□ -1.16
SLIRP-201ENST00000238688 KRTAP1-4P0C5Y4 121 aa7.78□□□□□ -1.16
SLIRP-201ENST00000238688 ANAPC13Q9BS18 74 aa7.77□□□□□ -1.17
SLIRP-201ENST00000238688 LINC00472Q9H8W2 130 aa7.77□□□□□ -1.17
SLIRP-201ENST00000238688 UBR4Q5T4S7 5183 aa7.75□□□□□ -1.17
SLIRP-201ENST00000238688 IGKV4-1P06312 121 aa7.75□□□□□ -1.17
SLIRP-201ENST00000238688 RPS29P62273 56 aaKnown RBP7.74□□□□□ -1.17
SLIRP-201ENST00000238688 A0A0G2JQZ4 141 aa7.73□□□□□ -1.17
SLIRP-201ENST00000238688 A8MWP4 228 aa7.73□□□□□ -1.17
SLIRP-201ENST00000238688 NDUFB1O75438 58 aa7.73□□□□□ -1.17
SLIRP-201ENST00000238688 DSCR10P59022 87 aa7.73□□□□□ -1.17
SLIRP-201ENST00000238688 SPAG11AQ6PDA7 123 aa7.73□□□□□ -1.17
SLIRP-201ENST00000238688 LIMD2Q9BT23 127 aa7.73□□□□□ -1.17
SLIRP-201ENST00000238688 ANAPC11Q9NYG5 84 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms