RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 MP68P56378 58 aa8.83□□□□□ -1
SCNN1A-201ENST00000228916 WFDC13Q8IUB5 93 aa8.83□□□□□ -1
SCNN1A-201ENST00000228916 FBN1P35555 2871 aaKnown RBP8.83□□□□□ -1
SCNN1A-201ENST00000228916 DEFB116Q30KQ4 102 aa8.83□□□□□ -1
SCNN1A-201ENST00000228916 DNAH10Q8IVF4 4471 aa8.83□□□□□ -1
SCNN1A-201ENST00000228916 KRTAP29-1A8MX34 341 aaPredicted RBP8.82□□□□□ -1
SCNN1A-201ENST00000228916 STAB1Q9NY15 2570 aa8.82□□□□□ -1
SCNN1A-201ENST00000228916 A0A087WSZ3 146 aa8.81□□□□□ -1
SCNN1A-201ENST00000228916 MAST4O15021 2626 aa8.81□□□□□ -1
SCNN1A-201ENST00000228916 B9D2Q9BPU9 175 aa8.8□□□□□ -1
SCNN1A-201ENST00000228916 LINC00588Q9Y4M8 146 aa8.8□□□□□ -1
SCNN1A-201ENST00000228916 LINC00208Q96KT6 92 aa8.79□□□□□ -1
SCNN1A-201ENST00000228916 F8P00451 2351 aa8.79□□□□□ -1
SCNN1A-201ENST00000228916 NOTCH1P46531 2555 aa8.79□□□□□ -1
SCNN1A-201ENST00000228916 SPANXA2-OT1Q8N9U9 137 aa8.79□□□□□ -1
SCNN1A-201ENST00000228916 A8MUN3 132 aa8.77□□□□□ -1.01
SCNN1A-201ENST00000228916 H3BPC8 53 aa8.77□□□□□ -1.01
SCNN1A-201ENST00000228916 RPL37AP61513 92 aaKnown RBP8.77□□□□□ -1.01
SCNN1A-201ENST00000228916 PRLHP81277 87 aa8.76□□□□□ -1.01
SCNN1A-201ENST00000228916 PMAIP1Q13794 54 aa8.76□□□□□ -1.01
SCNN1A-201ENST00000228916 H0Y9P7 68 aa8.75□□□□□ -1.01
SCNN1A-201ENST00000228916 HUWE1Q7Z6Z7 4374 aaKnown RBP8.75□□□□□ -1.01
SCNN1A-201ENST00000228916 Q5VV11 94 aa8.74□□□□□ -1.01
SCNN1A-201ENST00000228916 CASC2Q6XLA1 102 aa8.74□□□□□ -1.01
SCNN1A-201ENST00000228916 DNAH9Q9NYC9 4486 aa8.74□□□□□ -1.01
SCNN1A-201ENST00000228916 PRB2P02812 416 aaPredicted RBP8.74□□□□□ -1.01
SCNN1A-201ENST00000228916 CNBPP62633 177 aaKnown RBP8.74□□□□□ -1.01
SCNN1A-201ENST00000228916 SRRM2Q9UQ35 2752 aaKnown RBP8.72□□□□□ -1.01
SCNN1A-201ENST00000228916 CSMD3Q7Z407 3707 aa8.72□□□□□ -1.01
SCNN1A-201ENST00000228916 A0A096LNI7 61 aa8.71□□□□□ -1.01
SCNN1A-201ENST00000228916 A8MWP4 228 aa8.71□□□□□ -1.01
SCNN1A-201ENST00000228916 UBE2AP49459 152 aa8.71□□□□□ -1.01
SCNN1A-201ENST00000228916 Q8N9P0 234 aaPredicted RBP8.71□□□□□ -1.01
SCNN1A-201ENST00000228916 C9orf163Q8N9P6 203 aa8.71□□□□□ -1.02
SCNN1A-201ENST00000228916 LINC00472Q9H8W2 130 aa8.71□□□□□ -1.02
SCNN1A-201ENST00000228916 NBEAL1Q6ZS30 2694 aa8.71□□□□□ -1.02
SCNN1A-201ENST00000228916 C16orf90A8MZG2 172 aa8.7□□□□□ -1.02
SCNN1A-201ENST00000228916 LIMD2Q9BT23 127 aa8.69□□□□□ -1.02
SCNN1A-201ENST00000228916 SPRR1BP22528 89 aa8.69□□□□□ -1.02
SCNN1A-201ENST00000228916 KRTAP24-1Q3LI83 254 aa8.69□□□□□ -1.02
SCNN1A-201ENST00000228916 A8MU10 97 aa8.67□□□□□ -1.02
SCNN1A-201ENST00000228916 IGKV2-24A0A0C4DH68 120 aa8.67□□□□□ -1.02
SCNN1A-201ENST00000228916 COL6A5A8TX70 2615 aa8.67□□□□□ -1.02
SCNN1A-201ENST00000228916 H0Y9J4 135 aa8.65□□□□□ -1.02
SCNN1A-201ENST00000228916 KRTAP11-1Q8IUC1 163 aa8.64□□□□□ -1.03
SCNN1A-201ENST00000228916 CHKB-CPT1BH3BT56 60 aa8.63□□□□□ -1.03
SCNN1A-201ENST00000228916 MMP24-AS1A0A0U1RRL7 71 aa8.63□□□□□ -1.03
SCNN1A-201ENST00000228916 DNAH7Q8WXX0 4024 aa8.62□□□□□ -1.03
SCNN1A-201ENST00000228916 IGLV7-46A0A075B6I9 117 aa8.62□□□□□ -1.03
SCNN1A-201ENST00000228916 PRR15LQ9BU68 103 aa8.62□□□□□ -1.03
SCNN1A-201ENST00000228916 KRTAP1-5Q9BYS1 174 aa8.62□□□□□ -1.03
SCNN1A-201ENST00000228916 COL7A1Q02388 2944 aa8.62□□□□□ -1.03
SCNN1A-201ENST00000228916 PHF5AQ7RTV0 110 aaKnown RBP8.6□□□□□ -1.03
SCNN1A-201ENST00000228916 COA5Q86WW8 74 aa8.6□□□□□ -1.03
SCNN1A-201ENST00000228916 LOC101927531A0A1B0GV80 90 aa8.6□□□□□ -1.03
SCNN1A-201ENST00000228916 Q75L30 129 aa8.59□□□□□ -1.03
SCNN1A-201ENST00000228916 ASB16-AS1Q495Z4 193 aa8.57□□□□□ -1.04
SCNN1A-201ENST00000228916 TENM2Q9NT68 2774 aa8.57□□□□□ -1.04
SCNN1A-201ENST00000228916 CHTF8P0CG12 524 aa8.56□□□□□ -1.04
SCNN1A-201ENST00000228916 STAB2Q8WWQ8 2551 aa8.56□□□□□ -1.04
SCNN1A-201ENST00000228916 LCA10Q71F78 164 aa8.55□□□□□ -1.04
SCNN1A-201ENST00000228916 Q96NJ1 140 aa8.54□□□□□ -1.04
SCNN1A-201ENST00000228916 TP53AIP1Q9HCN2 124 aa8.54□□□□□ -1.04
SCNN1A-201ENST00000228916 K7EIL1 84 aa8.53□□□□□ -1.04
SCNN1A-201ENST00000228916 CD164Q04900 197 aa8.53□□□□□ -1.04
SCNN1A-201ENST00000228916 ATP11AUNQ6ZP68 121 aa8.52□□□□□ -1.05
SCNN1A-201ENST00000228916 MOBPQ13875 183 aa8.52□□□□□ -1.05
SCNN1A-201ENST00000228916 PCOTHQ58A44 107 aa8.51□□□□□ -1.05
SCNN1A-201ENST00000228916 Q6ZR54 194 aa8.51□□□□□ -1.05
SCNN1A-201ENST00000228916 KRTAP13-1Q8IUC0 172 aa8.51□□□□□ -1.05
SCNN1A-201ENST00000228916 A6NED7 52 aa8.51□□□□□ -1.05
SCNN1A-201ENST00000228916 C14orf177Q52M58 125 aa8.5□□□□□ -1.05
SCNN1A-201ENST00000228916 PLAC8Q9NZF1 115 aa8.5□□□□□ -1.05
SCNN1A-201ENST00000228916 KTN1-AS1Q86SY8 53 aa8.5□□□□□ -1.05
SCNN1A-201ENST00000228916 LINC01558Q9Y6Z2 57 aa8.49□□□□□ -1.05
SCNN1A-201ENST00000228916 SPTSSBQ8NFR3 76 aa8.49□□□□□ -1.05
SCNN1A-201ENST00000228916 C8orf17Q9NRJ1 99 aa8.48□□□□□ -1.05
SCNN1A-201ENST00000228916 PLECQ15149 4684 aaKnown RBP8.48□□□□□ -1.05
SCNN1A-201ENST00000228916 CDC42SE1Q9NRR8 79 aa8.47□□□□□ -1.05
SCNN1A-201ENST00000228916 MGAM2Q2M2H8 2515 aa8.47□□□□□ -1.05
SCNN1A-201ENST00000228916 DYNC2H1Q8NCM8 4307 aaKnown RBP8.46□□□□□ -1.05
SCNN1A-201ENST00000228916 A6NN06 94 aa8.45□□□□□ -1.06
SCNN1A-201ENST00000228916 SPAG11AQ6PDA7 123 aa8.44□□□□□ -1.06
SCNN1A-201ENST00000228916 PANO1I0J062 215 aa8.43□□□□□ -1.06
SCNN1A-201ENST00000228916 UBE2DNLQ8IWF7 75 aa8.43□□□□□ -1.06
SCNN1A-201ENST00000228916 IGLV9-49A0A0B4J1Y8 123 aa8.43□□□□□ -1.06
SCNN1A-201ENST00000228916 A0A1B0GVX0 72 aa8.43□□□□□ -1.06
SCNN1A-201ENST00000228916 HRES1P13985 223 aa8.42□□□□□ -1.06
SCNN1A-201ENST00000228916 FRAS1Q86XX4 4008 aa8.41□□□□□ -1.06
SCNN1A-201ENST00000228916 LINC00483Q53H64 154 aa8.41□□□□□ -1.06
SCNN1A-201ENST00000228916 APLNQ9ULZ1 77 aa8.41□□□□□ -1.06
SCNN1A-201ENST00000228916 NDUFS5O43920 106 aa8.4□□□□□ -1.06
SCNN1A-201ENST00000228916 IGHV6-1A0A0B4J1U7 121 aa8.4□□□□□ -1.06
SCNN1A-201ENST00000228916 MRPL34Q9BQ48 92 aaKnown RBP8.4□□□□□ -1.07
SCNN1A-201ENST00000228916 RBM12B-AS1Q9P1G2 102 aa8.37□□□□□ -1.07
SCNN1A-201ENST00000228916 SPINK7P58062 85 aa8.36□□□□□ -1.07
SCNN1A-201ENST00000228916 WWC2-AS2Q96NR7 200 aa8.35□□□□□ -1.07
SCNN1A-201ENST00000228916 A0A087X002 238 aa8.35□□□□□ -1.07
SCNN1A-201ENST00000228916 NOTCH2NLQ7Z3S9 236 aa8.35□□□□□ -1.07
SCNN1A-201ENST00000228916 HECTD4Q9Y4D8 3996 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms