RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 VWFP04275 2813 aa9.37□□□□□ -0.91
PRDM4-201ENST00000228437 PDZD2O15018 2839 aa9.36□□□□□ -0.91
PRDM4-201ENST00000228437 Q1T7F1 81 aa9.35□□□□□ -0.91
PRDM4-201ENST00000228437 LINC01556Q5JQF7 62 aa9.35□□□□□ -0.91
PRDM4-201ENST00000228437 CHTF8P0CG12 524 aa9.35□□□□□ -0.91
PRDM4-201ENST00000228437 COA5Q86WW8 74 aa9.34□□□□□ -0.91
PRDM4-201ENST00000228437 RETNLBQ9BQ08 111 aa9.32□□□□□ -0.92
PRDM4-201ENST00000228437 PHF5AQ7RTV0 110 aaKnown RBP9.31□□□□□ -0.92
PRDM4-201ENST00000228437 Q5VV11 94 aa9.27□□□□□ -0.92
PRDM4-201ENST00000228437 A0A1B0GW54 56 aa9.27□□□□□ -0.93
PRDM4-201ENST00000228437 CD164Q04900 197 aa9.26□□□□□ -0.93
PRDM4-201ENST00000228437 PKD1L1Q8TDX9 2849 aa9.26□□□□□ -0.93
PRDM4-201ENST00000228437 LINC00588Q9Y4M8 146 aa9.26□□□□□ -0.93
PRDM4-201ENST00000228437 KRTAP1-1Q07627 177 aa9.26□□□□□ -0.93
PRDM4-201ENST00000228437 C16orf90A8MZG2 172 aa9.25□□□□□ -0.93
PRDM4-201ENST00000228437 Q8N9P0 234 aaPredicted RBP9.24□□□□□ -0.93
PRDM4-201ENST00000228437 SPRR4Q96PI1 79 aa9.24□□□□□ -0.93
PRDM4-201ENST00000228437 CYP4F30PQ9H0H9 118 aa9.23□□□□□ -0.93
PRDM4-201ENST00000228437 KTN1-AS1Q86SY8 53 aa9.22□□□□□ -0.93
PRDM4-201ENST00000228437 TENM4Q6N022 2769 aa9.22□□□□□ -0.93
PRDM4-201ENST00000228437 A8MWP4 228 aa9.21□□□□□ -0.93
PRDM4-201ENST00000228437 KRTAP26-1Q6PEX3 210 aa9.21□□□□□ -0.94
PRDM4-201ENST00000228437 RBM12B-AS1Q9P1G2 102 aa9.21□□□□□ -0.94
PRDM4-201ENST00000228437 LOC101927531A0A1B0GV80 90 aa9.2□□□□□ -0.94
PRDM4-201ENST00000228437 TENM1Q9UKZ4 2725 aa9.2□□□□□ -0.94
PRDM4-201ENST00000228437 TENM3Q9P273 2699 aa9.19□□□□□ -0.94
PRDM4-201ENST00000228437 NBPF19A0A087WUL8 3843 aa9.18□□□□□ -0.94
PRDM4-201ENST00000228437 ZCCHC13Q8WW36 166 aaKnown RBP9.18□□□□□ -0.94
PRDM4-201ENST00000228437 ATP11AUNQ6ZP68 121 aa9.16□□□□□ -0.94
PRDM4-201ENST00000228437 H3BNG1 76 aa9.16□□□□□ -0.94
PRDM4-201ENST00000228437 DNAH10OSP0CZ25 163 aa9.16□□□□□ -0.94
PRDM4-201ENST00000228437 CNBPP62633 177 aaKnown RBP9.16□□□□□ -0.94
PRDM4-201ENST00000228437 KRTAP10-11P60412 298 aa9.16□□□□□ -0.94
PRDM4-201ENST00000228437 PRR26Q8N8Z3 221 aa9.16□□□□□ -0.94
PRDM4-201ENST00000228437 TNP2Q05952 138 aa9.15□□□□□ -0.94
PRDM4-201ENST00000228437 ANAPC11Q9NYG5 84 aa9.14□□□□□ -0.95
PRDM4-201ENST00000228437 H3BPC8 53 aa9.13□□□□□ -0.95
PRDM4-201ENST00000228437 MOBPQ13875 183 aa9.12□□□□□ -0.95
PRDM4-201ENST00000228437 IGLV8-61A0A075B6I0 122 aa9.12□□□□□ -0.95
PRDM4-201ENST00000228437 CIRBP-AS1Q8TBR5 109 aa9.12□□□□□ -0.95
PRDM4-201ENST00000228437 TLX1NBP0CAT3 122 aa9.11□□□□□ -0.95
PRDM4-201ENST00000228437 LCA10Q71F78 164 aa9.11□□□□□ -0.95
PRDM4-201ENST00000228437 SPRR1AP35321 89 aa9.1□□□□□ -0.95
PRDM4-201ENST00000228437 PRAC1Q96KF2 57 aa9.1□□□□□ -0.95
PRDM4-201ENST00000228437 SPANXA2-OT1Q8N9U9 137 aa9.1□□□□□ -0.95
PRDM4-201ENST00000228437 SPINK1P00995 79 aa9.09□□□□□ -0.95
PRDM4-201ENST00000228437 KRTAP4-16G5E9R7 235 aaPredicted RBP9.08□□□□□ -0.96
PRDM4-201ENST00000228437 KRTAP24-1Q3LI83 254 aa9.08□□□□□ -0.96
PRDM4-201ENST00000228437 SPINK7P58062 85 aa9.08□□□□□ -0.96
PRDM4-201ENST00000228437 PLA2G2DQ9UNK4 145 aa9.08□□□□□ -0.96
PRDM4-201ENST00000228437 KMT2BQ9UMN6 2715 aaPredicted RBP9.08□□□□□ -0.96
PRDM4-201ENST00000228437 C14orf177Q52M58 125 aa9.07□□□□□ -0.96
PRDM4-201ENST00000228437 CDC42SE1Q9NRR8 79 aa9.06□□□□□ -0.96
PRDM4-201ENST00000228437 C7orf65Q6ZTY9 151 aa9.06□□□□□ -0.96
PRDM4-201ENST00000228437 KRTAP7-1Q8IUC3 87 aa9.06□□□□□ -0.96
PRDM4-201ENST00000228437 C8orf17Q9NRJ1 99 aa9.06□□□□□ -0.96
PRDM4-201ENST00000228437 FBN1P35555 2871 aaKnown RBP9.05□□□□□ -0.96
PRDM4-201ENST00000228437 STAB2Q8WWQ8 2551 aa9.05□□□□□ -0.96
PRDM4-201ENST00000228437 OTOGQ6ZRI0 2925 aa9.04□□□□□ -0.96
PRDM4-201ENST00000228437 TP53AIP1Q9HCN2 124 aa9.04□□□□□ -0.96
PRDM4-201ENST00000228437 SRRM2Q9UQ35 2752 aaKnown RBP9.04□□□□□ -0.96
PRDM4-201ENST00000228437 LCE6AA0A183 80 aa9.03□□□□□ -0.96
PRDM4-201ENST00000228437 Q75L30 129 aa9.03□□□□□ -0.96
PRDM4-201ENST00000228437 A0A1B0GU69 56 aa9.02□□□□□ -0.96
PRDM4-201ENST00000228437 IGLV5-37A0A075B6J1 123 aa9.02□□□□□ -0.97
PRDM4-201ENST00000228437 IGLV7-46A0A075B6I9 117 aa9.02□□□□□ -0.97
PRDM4-201ENST00000228437 MMP24-AS1A0A0U1RRL7 71 aa9.01□□□□□ -0.97
PRDM4-201ENST00000228437 MRPL34Q9BQ48 92 aaKnown RBP9□□□□□ -0.97
PRDM4-201ENST00000228437 KRTAP29-1A8MX34 341 aaPredicted RBP9□□□□□ -0.97
PRDM4-201ENST00000228437 IGKV2D-30A0A075B6S6 120 aa8.98□□□□□ -0.97
PRDM4-201ENST00000228437 IGKV2-30P06310 120 aa8.98□□□□□ -0.97
PRDM4-201ENST00000228437 LINC00472Q9H8W2 130 aa8.98□□□□□ -0.97
PRDM4-201ENST00000228437 K7EIL1 84 aa8.98□□□□□ -0.97
PRDM4-201ENST00000228437 HRES1P13985 223 aa8.97□□□□□ -0.97
PRDM4-201ENST00000228437 MDFIQ99750 246 aa8.97□□□□□ -0.97
PRDM4-201ENST00000228437 ACYP2P14621 99 aa8.96□□□□□ -0.98
PRDM4-201ENST00000228437 A0A1B0GVX0 72 aa8.94□□□□□ -0.98
PRDM4-201ENST00000228437 KRTAP11-1Q8IUC1 163 aa8.94□□□□□ -0.98
PRDM4-201ENST00000228437 ZNF469Q96JG9 3925 aaPredicted RBP8.94□□□□□ -0.98
PRDM4-201ENST00000228437 AKAP9Q99996 3911 aa8.93□□□□□ -0.98
PRDM4-201ENST00000228437 C9orf163Q8N9P6 203 aa8.93□□□□□ -0.98
PRDM4-201ENST00000228437 TRRAPQ9Y4A5 3859 aa8.92□□□□□ -0.98
PRDM4-201ENST00000228437 LINC01558Q9Y6Z2 57 aa8.91□□□□□ -0.98
PRDM4-201ENST00000228437 LINC00313P59037 77 aa8.91□□□□□ -0.98
PRDM4-201ENST00000228437 ZNF706Q9Y5V0 76 aaPredicted RBP8.91□□□□□ -0.98
PRDM4-201ENST00000228437 KRTAP1-5Q9BYS1 174 aa8.91□□□□□ -0.98
PRDM4-201ENST00000228437 C8orf87E5RJ46 101 aa8.88□□□□□ -0.99
PRDM4-201ENST00000228437 DMBT1Q9UGM3 2413 aaPredicted RBP8.88□□□□□ -0.99
PRDM4-201ENST00000228437 ADM2Q7Z4H4 148 aa8.88□□□□□ -0.99
PRDM4-201ENST00000228437 A0A087X002 238 aa8.87□□□□□ -0.99
PRDM4-201ENST00000228437 NOTCH2NLQ7Z3S9 236 aa8.87□□□□□ -0.99
PRDM4-201ENST00000228437 A6NN06 94 aa8.86□□□□□ -0.99
PRDM4-201ENST00000228437 FLG2Q5D862 2391 aaPredicted RBP8.86□□□□□ -0.99
PRDM4-201ENST00000228437 TENM2Q9NT68 2774 aa8.84□□□□□ -0.99
PRDM4-201ENST00000228437 PANO1I0J062 215 aa8.83□□□□□ -1
PRDM4-201ENST00000228437 MIR22HGQ0VDD5 57 aa8.82□□□□□ -1
PRDM4-201ENST00000228437 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.81□□□□□ -1
PRDM4-201ENST00000228437 RTL8CO15255 209 aa8.81□□□□□ -1
PRDM4-201ENST00000228437 SPACA4Q8TDM5 124 aa8.79□□□□□ -1
PRDM4-201ENST00000228437 C4orf48Q5BLP8 95 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms