RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 VWFP04275 2813 aa9.37□□□□□ -0.91
PRDM4-201ENST00000228437 PDZD2O15018 2839 aa9.36□□□□□ -0.91
PRDM4-201ENST00000228437 Q1T7F1 81 aa9.35□□□□□ -0.91
PRDM4-201ENST00000228437 LINC01556Q5JQF7 62 aa9.35□□□□□ -0.91
PRDM4-201ENST00000228437 CHTF8P0CG12 524 aa9.35□□□□□ -0.91
PRDM4-201ENST00000228437 COA5Q86WW8 74 aa9.34□□□□□ -0.91
PRDM4-201ENST00000228437 RETNLBQ9BQ08 111 aa9.32□□□□□ -0.92
PRDM4-201ENST00000228437 PHF5AQ7RTV0 110 aaKnown RBP9.31□□□□□ -0.92
PRDM4-201ENST00000228437 Q5VV11 94 aa9.27□□□□□ -0.92
PRDM4-201ENST00000228437 A0A1B0GW54 56 aa9.27□□□□□ -0.93
PRDM4-201ENST00000228437 CD164Q04900 197 aa9.26□□□□□ -0.93
PRDM4-201ENST00000228437 PKD1L1Q8TDX9 2849 aa9.26□□□□□ -0.93
PRDM4-201ENST00000228437 LINC00588Q9Y4M8 146 aa9.26□□□□□ -0.93
PRDM4-201ENST00000228437 KRTAP1-1Q07627 177 aa9.26□□□□□ -0.93
PRDM4-201ENST00000228437 C16orf90A8MZG2 172 aa9.25□□□□□ -0.93
PRDM4-201ENST00000228437 Q8N9P0 234 aaPredicted RBP9.24□□□□□ -0.93
PRDM4-201ENST00000228437 SPRR4Q96PI1 79 aa9.24□□□□□ -0.93
PRDM4-201ENST00000228437 CYP4F30PQ9H0H9 118 aa9.23□□□□□ -0.93
PRDM4-201ENST00000228437 KTN1-AS1Q86SY8 53 aa9.22□□□□□ -0.93
PRDM4-201ENST00000228437 TENM4Q6N022 2769 aa9.22□□□□□ -0.93
PRDM4-201ENST00000228437 A8MWP4 228 aa9.21□□□□□ -0.93
PRDM4-201ENST00000228437 KRTAP26-1Q6PEX3 210 aa9.21□□□□□ -0.94
PRDM4-201ENST00000228437 RBM12B-AS1Q9P1G2 102 aa9.21□□□□□ -0.94
PRDM4-201ENST00000228437 LOC101927531A0A1B0GV80 90 aa9.2□□□□□ -0.94
PRDM4-201ENST00000228437 TENM1Q9UKZ4 2725 aa9.2□□□□□ -0.94
PRDM4-201ENST00000228437 TENM3Q9P273 2699 aa9.19□□□□□ -0.94
PRDM4-201ENST00000228437 NBPF19A0A087WUL8 3843 aa9.18□□□□□ -0.94
PRDM4-201ENST00000228437 ZCCHC13Q8WW36 166 aaKnown RBP9.18□□□□□ -0.94
PRDM4-201ENST00000228437 ATP11AUNQ6ZP68 121 aa9.16□□□□□ -0.94
PRDM4-201ENST00000228437 H3BNG1 76 aa9.16□□□□□ -0.94
PRDM4-201ENST00000228437 DNAH10OSP0CZ25 163 aa9.16□□□□□ -0.94
PRDM4-201ENST00000228437 CNBPP62633 177 aaKnown RBP9.16□□□□□ -0.94
PRDM4-201ENST00000228437 KRTAP10-11P60412 298 aa9.16□□□□□ -0.94
PRDM4-201ENST00000228437 PRR26Q8N8Z3 221 aa9.16□□□□□ -0.94
PRDM4-201ENST00000228437 TNP2Q05952 138 aa9.15□□□□□ -0.94
PRDM4-201ENST00000228437 ANAPC11Q9NYG5 84 aa9.14□□□□□ -0.95
PRDM4-201ENST00000228437 H3BPC8 53 aa9.13□□□□□ -0.95
PRDM4-201ENST00000228437 MOBPQ13875 183 aa9.12□□□□□ -0.95
PRDM4-201ENST00000228437 IGLV8-61A0A075B6I0 122 aa9.12□□□□□ -0.95
PRDM4-201ENST00000228437 CIRBP-AS1Q8TBR5 109 aa9.12□□□□□ -0.95
PRDM4-201ENST00000228437 TLX1NBP0CAT3 122 aa9.11□□□□□ -0.95
PRDM4-201ENST00000228437 LCA10Q71F78 164 aa9.11□□□□□ -0.95
PRDM4-201ENST00000228437 SPRR1AP35321 89 aa9.1□□□□□ -0.95
PRDM4-201ENST00000228437 PRAC1Q96KF2 57 aa9.1□□□□□ -0.95
PRDM4-201ENST00000228437 SPANXA2-OT1Q8N9U9 137 aa9.1□□□□□ -0.95
PRDM4-201ENST00000228437 SPINK1P00995 79 aa9.09□□□□□ -0.95
PRDM4-201ENST00000228437 KRTAP4-16G5E9R7 235 aaPredicted RBP9.08□□□□□ -0.96
PRDM4-201ENST00000228437 KRTAP24-1Q3LI83 254 aa9.08□□□□□ -0.96
PRDM4-201ENST00000228437 SPINK7P58062 85 aa9.08□□□□□ -0.96
PRDM4-201ENST00000228437 PLA2G2DQ9UNK4 145 aa9.08□□□□□ -0.96
PRDM4-201ENST00000228437 KMT2BQ9UMN6 2715 aaPredicted RBP9.08□□□□□ -0.96
PRDM4-201ENST00000228437 C14orf177Q52M58 125 aa9.07□□□□□ -0.96
PRDM4-201ENST00000228437 CDC42SE1Q9NRR8 79 aa9.06□□□□□ -0.96
PRDM4-201ENST00000228437 C7orf65Q6ZTY9 151 aa9.06□□□□□ -0.96
PRDM4-201ENST00000228437 KRTAP7-1Q8IUC3 87 aa9.06□□□□□ -0.96
PRDM4-201ENST00000228437 C8orf17Q9NRJ1 99 aa9.06□□□□□ -0.96
PRDM4-201ENST00000228437 FBN1P35555 2871 aaKnown RBP9.05□□□□□ -0.96
PRDM4-201ENST00000228437 STAB2Q8WWQ8 2551 aa9.05□□□□□ -0.96
PRDM4-201ENST00000228437 OTOGQ6ZRI0 2925 aa9.04□□□□□ -0.96
PRDM4-201ENST00000228437 TP53AIP1Q9HCN2 124 aa9.04□□□□□ -0.96
PRDM4-201ENST00000228437 SRRM2Q9UQ35 2752 aaKnown RBP9.04□□□□□ -0.96
PRDM4-201ENST00000228437 LCE6AA0A183 80 aa9.03□□□□□ -0.96
PRDM4-201ENST00000228437 Q75L30 129 aa9.03□□□□□ -0.96
PRDM4-201ENST00000228437 A0A1B0GU69 56 aa9.02□□□□□ -0.96
PRDM4-201ENST00000228437 IGLV5-37A0A075B6J1 123 aa9.02□□□□□ -0.97
PRDM4-201ENST00000228437 IGLV7-46A0A075B6I9 117 aa9.02□□□□□ -0.97
PRDM4-201ENST00000228437 MMP24-AS1A0A0U1RRL7 71 aa9.01□□□□□ -0.97
PRDM4-201ENST00000228437 MRPL34Q9BQ48 92 aaKnown RBP9□□□□□ -0.97
PRDM4-201ENST00000228437 KRTAP29-1A8MX34 341 aaPredicted RBP9□□□□□ -0.97
PRDM4-201ENST00000228437 IGKV2D-30A0A075B6S6 120 aa8.98□□□□□ -0.97
PRDM4-201ENST00000228437 IGKV2-30P06310 120 aa8.98□□□□□ -0.97
PRDM4-201ENST00000228437 LINC00472Q9H8W2 130 aa8.98□□□□□ -0.97
PRDM4-201ENST00000228437 K7EIL1 84 aa8.98□□□□□ -0.97
PRDM4-201ENST00000228437 HRES1P13985 223 aa8.97□□□□□ -0.97
PRDM4-201ENST00000228437 MDFIQ99750 246 aa8.97□□□□□ -0.97
PRDM4-201ENST00000228437 ACYP2P14621 99 aa8.96□□□□□ -0.98
PRDM4-201ENST00000228437 A0A1B0GVX0 72 aa8.94□□□□□ -0.98
PRDM4-201ENST00000228437 KRTAP11-1Q8IUC1 163 aa8.94□□□□□ -0.98
PRDM4-201ENST00000228437 ZNF469Q96JG9 3925 aaPredicted RBP8.94□□□□□ -0.98
PRDM4-201ENST00000228437 AKAP9Q99996 3911 aa8.93□□□□□ -0.98
PRDM4-201ENST00000228437 C9orf163Q8N9P6 203 aa8.93□□□□□ -0.98
PRDM4-201ENST00000228437 TRRAPQ9Y4A5 3859 aa8.92□□□□□ -0.98
PRDM4-201ENST00000228437 LINC01558Q9Y6Z2 57 aa8.91□□□□□ -0.98
PRDM4-201ENST00000228437 LINC00313P59037 77 aa8.91□□□□□ -0.98
PRDM4-201ENST00000228437 ZNF706Q9Y5V0 76 aaPredicted RBP8.91□□□□□ -0.98
PRDM4-201ENST00000228437 KRTAP1-5Q9BYS1 174 aa8.91□□□□□ -0.98
PRDM4-201ENST00000228437 C8orf87E5RJ46 101 aa8.88□□□□□ -0.99
PRDM4-201ENST00000228437 DMBT1Q9UGM3 2413 aaPredicted RBP8.88□□□□□ -0.99
PRDM4-201ENST00000228437 ADM2Q7Z4H4 148 aa8.88□□□□□ -0.99
PRDM4-201ENST00000228437 A0A087X002 238 aa8.87□□□□□ -0.99
PRDM4-201ENST00000228437 NOTCH2NLQ7Z3S9 236 aa8.87□□□□□ -0.99
PRDM4-201ENST00000228437 A6NN06 94 aa8.86□□□□□ -0.99
PRDM4-201ENST00000228437 FLG2Q5D862 2391 aaPredicted RBP8.86□□□□□ -0.99
PRDM4-201ENST00000228437 TENM2Q9NT68 2774 aa8.84□□□□□ -0.99
PRDM4-201ENST00000228437 PANO1I0J062 215 aa8.83□□□□□ -1
PRDM4-201ENST00000228437 MIR22HGQ0VDD5 57 aa8.82□□□□□ -1
PRDM4-201ENST00000228437 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.81□□□□□ -1
PRDM4-201ENST00000228437 RTL8CO15255 209 aa8.81□□□□□ -1
PRDM4-201ENST00000228437 SPACA4Q8TDM5 124 aa8.79□□□□□ -1
PRDM4-201ENST00000228437 C4orf48Q5BLP8 95 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms