RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 TRAV13-2A0A0B4J235 113 aa3.56□□□□□ -1.84
AFP-201ENST00000226359 H3BT86 120 aa3.56□□□□□ -1.84
AFP-201ENST00000226359 PRR3P79522 188 aaKnown RBP3.56□□□□□ -1.84
AFP-201ENST00000226359 SND1-IT1Q9HBX3 110 aa3.56□□□□□ -1.84
AFP-201ENST00000226359 DMBT1Q9UGM3 2413 aaPredicted RBP3.56□□□□□ -1.84
AFP-201ENST00000226359 IGKV2D-30A0A075B6S6 120 aa3.55□□□□□ -1.84
AFP-201ENST00000226359 TRBV7-7A0A0K0K1E9 115 aa3.55□□□□□ -1.84
AFP-201ENST00000226359 FAM240AA0A1B0GVK7 77 aa3.55□□□□□ -1.84
AFP-201ENST00000226359 COX17Q14061 63 aa3.55□□□□□ -1.84
AFP-201ENST00000226359 UBE2BP63146 152 aa3.54□□□□□ -1.84
AFP-201ENST00000226359 C9orf116Q5BN46 136 aaPredicted RBP3.54□□□□□ -1.84
AFP-201ENST00000226359 TLX1NBP0CAT3 122 aa3.54□□□□□ -1.84
AFP-201ENST00000226359 C9orf153Q5TBE3 101 aa3.54□□□□□ -1.84
AFP-201ENST00000226359 UNQ6190/PRO20217Q6UXQ8 127 aa3.54□□□□□ -1.84
AFP-201ENST00000226359 C3orf22Q8N5N4 141 aa3.54□□□□□ -1.84
AFP-201ENST00000226359 OR13C6PQ8NH95 151 aa3.54□□□□□ -1.84
AFP-201ENST00000226359 IMUPQ9GZP8 106 aa3.54□□□□□ -1.84
AFP-201ENST00000226359 FAM236AA0A1B0GUQ0 79 aa3.53□□□□□ -1.84
AFP-201ENST00000226359 FAM236BA0A1B0GV22 79 aa3.53□□□□□ -1.84
AFP-201ENST00000226359 NDUFC2-KCTD14E9PQ53 114 aa3.53□□□□□ -1.84
AFP-201ENST00000226359 ACYP1P07311 99 aa3.53□□□□□ -1.84
AFP-201ENST00000226359 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
AFP-201ENST00000226359 KRTAP10-4P60372 401 aaPredicted RBP3.53□□□□□ -1.84
AFP-201ENST00000226359 CXCL6P80162 114 aa3.53□□□□□ -1.84
AFP-201ENST00000226359 FAM19A5Q7Z5A7 132 aaPredicted RBP3.53□□□□□ -1.84
AFP-201ENST00000226359 C6orf48Q9UBA6 75 aa3.53□□□□□ -1.84
AFP-201ENST00000226359 PKHD1L1Q86WI1 4243 aa3.53□□□□□ -1.84
AFP-201ENST00000226359 MYCBP2O75592 4640 aa3.53□□□□□ -1.84
AFP-201ENST00000226359 FLG2Q5D862 2391 aaPredicted RBP3.53□□□□□ -1.84
AFP-201ENST00000226359 LST1O00453 97 aa3.52□□□□□ -1.85
AFP-201ENST00000226359 SPINK6Q6UWN8 80 aa3.52□□□□□ -1.85
AFP-201ENST00000226359 J3KT08 172 aa3.52□□□□□ -1.85
AFP-201ENST00000226359 UQCRQO14949 82 aa3.52□□□□□ -1.85
AFP-201ENST00000226359 C1orf137Q5JT78 98 aa3.52□□□□□ -1.85
AFP-201ENST00000226359 CLEC2BQ92478 149 aa3.52□□□□□ -1.85
AFP-201ENST00000226359 SRRM2Q9UQ35 2752 aaKnown RBP3.51□□□□□ -1.85
AFP-201ENST00000226359 IGKV2-28A0A075B6P5 120 aa3.51□□□□□ -1.85
AFP-201ENST00000226359 A0A1B0GX51 115 aa3.51□□□□□ -1.85
AFP-201ENST00000226359 NDUFC2O95298 119 aa3.51□□□□□ -1.85
AFP-201ENST00000226359 IGKV2D-28P01615 120 aa3.51□□□□□ -1.85
AFP-201ENST00000226359 PHF5AQ7RTV0 110 aaKnown RBP3.51□□□□□ -1.85
AFP-201ENST00000226359 LINC00643Q86TS7 51 aa3.51□□□□□ -1.85
AFP-201ENST00000226359 LINC00337Q8N6G1 96 aa3.51□□□□□ -1.85
AFP-201ENST00000226359 DIRC1Q969H9 104 aa3.51□□□□□ -1.85
AFP-201ENST00000226359 A0A1W2PNN7 141 aa3.5□□□□□ -1.85
AFP-201ENST00000226359 RPL28P46779 137 aaKnown RBP3.5□□□□□ -1.85
AFP-201ENST00000226359 KRTAP10-6P60371 365 aaPredicted RBP3.5□□□□□ -1.85
AFP-201ENST00000226359 S100A7L2Q5SY68 101 aa3.5□□□□□ -1.85
AFP-201ENST00000226359 FAM19A1Q7Z5A9 133 aa3.5□□□□□ -1.85
AFP-201ENST00000226359 Q8N377 158 aa3.5□□□□□ -1.85
AFP-201ENST00000226359 NKAPP1Q8N9T2 125 aa3.5□□□□□ -1.85
AFP-201ENST00000226359 H0YGX0 51 aa3.5□□□□□ -1.85
AFP-201ENST00000226359 NCR3O14931 201 aa3.5□□□□□ -1.85
AFP-201ENST00000226359 SMIM11BQ8TCY0 68 aa3.5□□□□□ -1.85
AFP-201ENST00000226359 PSORS1C2Q9UIG4 136 aa3.5□□□□□ -1.85
AFP-201ENST00000226359 COX7CP15954 63 aa3.49□□□□□ -1.85
AFP-201ENST00000226359 RPS28P62857 69 aaKnown RBP3.49□□□□□ -1.85
AFP-201ENST00000226359 PRR4Q16378 134 aa3.49□□□□□ -1.85
AFP-201ENST00000226359 MRPL55Q7Z7F7 128 aaKnown RBP3.49□□□□□ -1.85
AFP-201ENST00000226359 FAT3Q8TDW7 4589 aa3.49□□□□□ -1.85
AFP-201ENST00000226359 TRACP01848 142 aa3.48□□□□□ -1.85
AFP-201ENST00000226359 SMCR5Q8TEV8 140 aa3.48□□□□□ -1.85
AFP-201ENST00000226359 FAM168BA1KXE4 195 aa3.48□□□□□ -1.85
AFP-201ENST00000226359 DNAL4O96015 105 aa3.48□□□□□ -1.85
AFP-201ENST00000226359 IGLV7-43P04211 117 aa3.48□□□□□ -1.85
AFP-201ENST00000226359 CRYGAP11844 174 aa3.48□□□□□ -1.85
AFP-201ENST00000226359 XAGE1AQ9HD64 81 aa3.48□□□□□ -1.85
AFP-201ENST00000226359 IGLV8-61A0A075B6I0 122 aa3.47□□□□□ -1.85
AFP-201ENST00000226359 ATOX1O00244 68 aa3.47□□□□□ -1.85
AFP-201ENST00000226359 C9orf129Q5T035 196 aaKnown RBP3.47□□□□□ -1.85
AFP-201ENST00000226359 C22orf24Q9Y442 160 aa3.47□□□□□ -1.85
AFP-201ENST00000226359 BAALC-AS2P0C853 105 aa3.46□□□□□ -1.85
AFP-201ENST00000226359 C4orf26Q17RF5 130 aa3.46□□□□□ -1.85
AFP-201ENST00000226359 HERC1Q15751 4861 aa3.46□□□□□ -1.86
AFP-201ENST00000226359 H0Y9J4 135 aa3.46□□□□□ -1.86
AFP-201ENST00000226359 M0R378 163 aa3.46□□□□□ -1.86
AFP-201ENST00000226359 UBE2AP49459 152 aa3.46□□□□□ -1.86
AFP-201ENST00000226359 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
AFP-201ENST00000226359 IGLV1-50A0A075B6I6 118 aa3.45□□□□□ -1.86
AFP-201ENST00000226359 hADV29S1A0JD25 119 aa3.45□□□□□ -1.86
AFP-201ENST00000226359 TMEM258P61165 79 aa3.45□□□□□ -1.86
AFP-201ENST00000226359 HIST1H4AP62805 103 aaKnown RBP3.45□□□□□ -1.86
AFP-201ENST00000226359 C6orf99Q4VX62 202 aa3.45□□□□□ -1.86
AFP-201ENST00000226359 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
AFP-201ENST00000226359 Q8NDZ9 215 aa3.45□□□□□ -1.86
AFP-201ENST00000226359 TRAV23DV6A0A075B6W5 121 aa3.44□□□□□ -1.86
AFP-201ENST00000226359 TRBV10-3A0A0K0K1G6 114 aa3.44□□□□□ -1.86
AFP-201ENST00000226359 BCE1O60756 84 aa3.44□□□□□ -1.86
AFP-201ENST00000226359 IGLV6-57P01721 117 aa3.44□□□□□ -1.86
AFP-201ENST00000226359 ZNF861PO60384 105 aa3.44□□□□□ -1.86
AFP-201ENST00000226359 MT1HL1P0DM35 61 aa3.44□□□□□ -1.86
AFP-201ENST00000226359 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
AFP-201ENST00000226359 ORMDL1Q9P0S3 153 aa3.44□□□□□ -1.86
AFP-201ENST00000226359 COX7BP24311 80 aa3.43□□□□□ -1.86
AFP-201ENST00000226359 CD164Q04900 197 aa3.43□□□□□ -1.86
AFP-201ENST00000226359 Q6JHZ5 121 aa3.43□□□□□ -1.86
AFP-201ENST00000226359 SERP2Q8N6R1 65 aa3.43□□□□□ -1.86
AFP-201ENST00000226359 LINC00167Q96N53 147 aa3.43□□□□□ -1.86
AFP-201ENST00000226359 ZNF73O43830 326 aaPredicted RBP3.42□□□□□ -1.86
AFP-201ENST00000226359 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms