RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 A0A1B0GW54 56 aa7.84□□□□□ -1.15
NUP88-201ENST00000225696 C1orf64Q8NEQ6 169 aa7.84□□□□□ -1.15
NUP88-201ENST00000225696 TENM2Q9NT68 2774 aa7.84□□□□□ -1.15
NUP88-201ENST00000225696 COL7A1Q02388 2944 aa7.84□□□□□ -1.15
NUP88-201ENST00000225696 IGFL1Q6UW32 110 aa7.84□□□□□ -1.15
NUP88-201ENST00000225696 PSCAO43653 123 aa7.83□□□□□ -1.16
NUP88-201ENST00000225696 PRLHP81277 87 aa7.83□□□□□ -1.16
NUP88-201ENST00000225696 REG3GQ6UW15 175 aa7.83□□□□□ -1.16
NUP88-201ENST00000225696 PRB2P02812 416 aaPredicted RBP7.83□□□□□ -1.16
NUP88-201ENST00000225696 HCG22E2RYF7 251 aa7.81□□□□□ -1.16
NUP88-201ENST00000225696 RPL37AP61513 92 aaKnown RBP7.81□□□□□ -1.16
NUP88-201ENST00000225696 WFDC13Q8IUB5 93 aa7.81□□□□□ -1.16
NUP88-201ENST00000225696 STAB2Q8WWQ8 2551 aa7.8□□□□□ -1.16
NUP88-201ENST00000225696 A0A087WSZ3 146 aa7.8□□□□□ -1.16
NUP88-201ENST00000225696 IGKV2-24A0A0C4DH68 120 aa7.8□□□□□ -1.16
NUP88-201ENST00000225696 DNAH7Q8WXX0 4024 aa7.79□□□□□ -1.16
NUP88-201ENST00000225696 A0A096LNI7 61 aa7.78□□□□□ -1.16
NUP88-201ENST00000225696 KRTAP11-1Q8IUC1 163 aa7.78□□□□□ -1.16
NUP88-201ENST00000225696 KRTAP1-5Q9BYS1 174 aa7.76□□□□□ -1.17
NUP88-201ENST00000225696 PSPHP1O15172 72 aa7.74□□□□□ -1.17
NUP88-201ENST00000225696 KRTAP29-1A8MX34 341 aaPredicted RBP7.72□□□□□ -1.17
NUP88-201ENST00000225696 CHTF8P0CG12 524 aa7.72□□□□□ -1.17
NUP88-201ENST00000225696 Q1T7F1 81 aa7.72□□□□□ -1.17
NUP88-201ENST00000225696 LINC00208Q96KT6 92 aa7.72□□□□□ -1.17
NUP88-201ENST00000225696 MGAM2Q2M2H8 2515 aa7.72□□□□□ -1.17
NUP88-201ENST00000225696 IGLV8-61A0A075B6I0 122 aa7.71□□□□□ -1.18
NUP88-201ENST00000225696 TRAV22A0A0B4J277 110 aa7.71□□□□□ -1.18
NUP88-201ENST00000225696 CYP4F30PQ9H0H9 118 aa7.71□□□□□ -1.18
NUP88-201ENST00000225696 PHF5AQ7RTV0 110 aaKnown RBP7.7□□□□□ -1.18
NUP88-201ENST00000225696 C16orf90A8MZG2 172 aa7.7□□□□□ -1.18
NUP88-201ENST00000225696 UBE2AP49459 152 aa7.7□□□□□ -1.18
NUP88-201ENST00000225696 CNBPP62633 177 aaKnown RBP7.69□□□□□ -1.18
NUP88-201ENST00000225696 C1orf195Q5TG92 126 aa7.68□□□□□ -1.18
NUP88-201ENST00000225696 A8MU10 97 aa7.67□□□□□ -1.18
NUP88-201ENST00000225696 MP68P56378 58 aa7.67□□□□□ -1.18
NUP88-201ENST00000225696 CASC2Q6XLA1 102 aa7.67□□□□□ -1.18
NUP88-201ENST00000225696 PRR15Q8IV56 129 aa7.66□□□□□ -1.18
NUP88-201ENST00000225696 A8MUN3 132 aa7.66□□□□□ -1.18
NUP88-201ENST00000225696 LINC00472Q9H8W2 130 aa7.66□□□□□ -1.18
NUP88-201ENST00000225696 H0Y9P7 68 aa7.65□□□□□ -1.18
NUP88-201ENST00000225696 B9D2Q9BPU9 175 aa7.64□□□□□ -1.19
NUP88-201ENST00000225696 NDUFB1O75438 58 aa7.63□□□□□ -1.19
NUP88-201ENST00000225696 PLECQ15149 4684 aaKnown RBP7.62□□□□□ -1.19
NUP88-201ENST00000225696 A8MWP4 228 aa7.62□□□□□ -1.19
NUP88-201ENST00000225696 PANO1I0J062 215 aa7.62□□□□□ -1.19
NUP88-201ENST00000225696 K7EIL1 84 aa7.62□□□□□ -1.19
NUP88-201ENST00000225696 FRAS1Q86XX4 4008 aa7.61□□□□□ -1.19
NUP88-201ENST00000225696 SPRR1BP22528 89 aa7.6□□□□□ -1.19
NUP88-201ENST00000225696 H0Y9J4 135 aa7.59□□□□□ -1.19
NUP88-201ENST00000225696 Q5VV11 94 aa7.59□□□□□ -1.2
NUP88-201ENST00000225696 C9orf163Q8N9P6 203 aa7.59□□□□□ -1.2
NUP88-201ENST00000225696 MDFIQ99750 246 aa7.59□□□□□ -1.2
NUP88-201ENST00000225696 MMP24-AS1A0A0U1RRL7 71 aa7.58□□□□□ -1.2
NUP88-201ENST00000225696 KRTAP21-3Q3LHN1 58 aa7.57□□□□□ -1.2
NUP88-201ENST00000225696 Q8N9P0 234 aaPredicted RBP7.57□□□□□ -1.2
NUP88-201ENST00000225696 DYNC2H1Q8NCM8 4307 aaKnown RBP7.56□□□□□ -1.2
NUP88-201ENST00000225696 SPANXA2-OT1Q8N9U9 137 aa7.56□□□□□ -1.2
NUP88-201ENST00000225696 Q96NJ1 140 aa7.54□□□□□ -1.2
NUP88-201ENST00000225696 V9GYY9 64 aa7.54□□□□□ -1.2
NUP88-201ENST00000225696 IGLV9-49A0A0B4J1Y8 123 aa7.53□□□□□ -1.2
NUP88-201ENST00000225696 KRTAP13-1Q8IUC0 172 aa7.53□□□□□ -1.2
NUP88-201ENST00000225696 DNAH8Q96JB1 4490 aa7.53□□□□□ -1.2
NUP88-201ENST00000225696 HECTD4Q9Y4D8 3996 aa7.53□□□□□ -1.2
NUP88-201ENST00000225696 PCOTHQ58A44 107 aa7.53□□□□□ -1.2
NUP88-201ENST00000225696 UBE2DNLQ8IWF7 75 aa7.53□□□□□ -1.2
NUP88-201ENST00000225696 H3BPC8 53 aa7.52□□□□□ -1.21
NUP88-201ENST00000225696 PRR15LQ9BU68 103 aa7.51□□□□□ -1.21
NUP88-201ENST00000225696 APLNQ9ULZ1 77 aa7.51□□□□□ -1.21
NUP88-201ENST00000225696 COA5Q86WW8 74 aa7.5□□□□□ -1.21
NUP88-201ENST00000225696 CHKB-CPT1BH3BT56 60 aa7.5□□□□□ -1.21
NUP88-201ENST00000225696 CD164Q04900 197 aa7.5□□□□□ -1.21
NUP88-201ENST00000225696 MOBPQ13875 183 aa7.49□□□□□ -1.21
NUP88-201ENST00000225696 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.49□□□□□ -1.21
NUP88-201ENST00000225696 PMAIP1Q13794 54 aa7.49□□□□□ -1.21
NUP88-201ENST00000225696 IGLV7-46A0A075B6I9 117 aa7.48□□□□□ -1.21
NUP88-201ENST00000225696 ASB16-AS1Q495Z4 193 aa7.48□□□□□ -1.21
NUP88-201ENST00000225696 ANAPC11Q9NYG5 84 aa7.47□□□□□ -1.21
NUP88-201ENST00000225696 A0A087X002 238 aa7.47□□□□□ -1.21
NUP88-201ENST00000225696 C14orf177Q52M58 125 aa7.47□□□□□ -1.21
NUP88-201ENST00000225696 NOTCH2NLQ7Z3S9 236 aa7.47□□□□□ -1.21
NUP88-201ENST00000225696 STARD9Q9P2P6 4700 aa7.47□□□□□ -1.21
NUP88-201ENST00000225696 KMT2AQ03164 3969 aa7.46□□□□□ -1.22
NUP88-201ENST00000225696 LIMD2Q9BT23 127 aa7.46□□□□□ -1.22
NUP88-201ENST00000225696 IGHV6-1A0A0B4J1U7 121 aa7.45□□□□□ -1.22
NUP88-201ENST00000225696 LCA10Q71F78 164 aa7.45□□□□□ -1.22
NUP88-201ENST00000225696 SEC61GP60059 68 aa7.44□□□□□ -1.22
NUP88-201ENST00000225696 C8orf17Q9NRJ1 99 aa7.44□□□□□ -1.22
NUP88-201ENST00000225696 DNAH2Q9P225 4427 aa7.44□□□□□ -1.22
NUP88-201ENST00000225696 Q6ZRN7 208 aaPredicted RBP7.44□□□□□ -1.22
NUP88-201ENST00000225696 DNAH17Q9UFH2 4485 aa7.43□□□□□ -1.22
NUP88-201ENST00000225696 NDUFS5O43920 106 aa7.43□□□□□ -1.22
NUP88-201ENST00000225696 VPS13DQ5THJ4 4388 aa7.42□□□□□ -1.22
NUP88-201ENST00000225696 NBDYA0A0U1RRE5 68 aa7.42□□□□□ -1.22
NUP88-201ENST00000225696 SPAG11AQ6PDA7 123 aa7.42□□□□□ -1.22
NUP88-201ENST00000225696 Q6ZR54 194 aa7.42□□□□□ -1.22
NUP88-201ENST00000225696 FBN3Q75N90 2809 aa7.41□□□□□ -1.22
NUP88-201ENST00000225696 SPACA4Q8TDM5 124 aa7.41□□□□□ -1.22
NUP88-201ENST00000225696 WWC2-AS2Q96NR7 200 aa7.4□□□□□ -1.22
NUP88-201ENST00000225696 A0A1B0GVX0 72 aa7.4□□□□□ -1.23
NUP88-201ENST00000225696 Q75L30 129 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms